|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:36727..38337- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006666-T1 ID=KJC3_006666-T1|Name=KJC3_006666-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1611bp|location=Sequence derived from alignment at ch5:36727..38337- (Aspergillus niger KJC3)
ATGTCGGGCGGAAGAAGGAACAACGTTCGCGCCACGGAGGAAATCAAATA
TCGTTGTCGAACTGTCCACCCTCTTACTTGCAATGCCATGGTATTCACAG
GACTTATCGTGGACGCGCAGCTCGATGAAGTTGTGTTAAGGCAGACGGCG
GCTCAGCTGGTGAAGGCGTGGCCTGCTCTGGGTGGACAGCTTTACCGGTC
GGTCAGTGAATAGCACCATATTGAAATCCGGGCGGAATGATGATTTCTCT
AAACTGTGAGACAGAGCCGCCCGTATGCACTCTCATCGGGCTCGACTGTC
GACTTTGAAAGTCGGACGCTCCCCAAAAGTGCAACATCCTGGAAACGAGG
CATATTTCATTCCAGAGAATGCAATCAGCCGATCATTAGTGACTCCCTCA
ACCCAGAAGAATTGGATGATGCTTTCATCGTTGACGTACCTGCCGCGCCT
GCGAATGTCTTCCTCATTCGTGCCACTCTTTTCCGCGACGCTACCCTACT
CTGCTTCGGCATTAGTCACCATTTGGCTGACGGCACTGCCGCCTACGACG
TGATTCGGGCCTATTGTGACCTGCTTGCCGGGAGCCCCATCCCATCGTTG
CTGCTCCCACCCGATGCGTGTGGCCAGCGAATGTCGGACCGGGTGCTTCT
CAACGACAAGCACGAAAGGTCACTTCGGTCTATAACCTACGCAGAGCATC
TGGCCAACTTCACCGCTGGGTTCTGGCCGATCTTACTGCTCATGATCAGA
GTAATTATATGCCTGCTGCTGCGCAAGCTATGTCTGCAGGAAACCCTGGA
GGAAAGGTACATTTACCTCCCGGACGACTGGGTTGGCGCCGTGCACAAAG
GAGCACTCAATACCCTCGCTGCCATGCCTGTGGGTGCCCAGCCCTCGTGG
GATACCCAGCCGACCAGGAACAACATTATCAATGCCTGGTTCCTCAAATG
GGTCTACAGTGCTATCCCGAGCAGTCGAGCTGACATGTATTTCTATGGTC
CGCTCAGCTATCGGGGTGTGGTTGAGCCTCCCCAGCCAGGGGCCTACTGG
ATTCATAACAGTATCGGGCTCGTGCGGCACAAGCTGTCAGTGGCTCAGAT
CCAGAACGAGCCTGTGGCTATGCTGGCGGGCCGACTCCGCTTGGCCAGCT
TGCGGTTCACCTGCCCGGCATCCATCAAGGCGTTTCTGCAGATGTGCGAG
GATCATGCGTCACAGCAGATGCTGCCGAGAATCCCCGCCAAGGGACGAAT
ACCGATGGTGATGGTCACCACATGGACAGGGTTCGATTTCGCATGCTTGG
ACTTTTCGAGCGCCGCGTGCGACCGGAGCAAACCAGCCAAAGTCCTCTTC
ATCCATCCCCTTGTTCGGAGCCTGCGACAGGGAGTGTGGCCCTCTGCATA
TACGCTGAAGAGTGCGCAGGGTGGTGGGTACTGGCTGCGAGCCTGGAATA
CTTTATCGGGATGGAAGAAGTTCAGTCAAATGGTGGATGTCGATACTCTA
TGATGCTTCATCCTGATGAAATCCATGTCAGGTAGACAAGTATCACCACT
AGCAATCCATAGTCTAGTTCAGTATACCCCCTCTAGAAATCAGAAAAGAT
GTCTTTCGTGG back to topCoding sequence (CDS) from alignment at ch5:36727..38337- >KJC3_006666-T1 ID=KJC3_006666-T1|Name=KJC3_006666-T1|organism=Aspergillus niger KJC3|type=CDS|length=2880bp|location=Sequence derived from alignment at ch5:36727..38337- (Aspergillus niger KJC3)
AGCCGCCCGTATGCACTCTCATCGGGCTCGACTGTCGACTTTGAAAGTCG
GACGCTCCCCAAAAGTGCAACATCCTGGAAACGAGGCATATTTCATTCCA
GAGAATGCAATCAGCCGATCATTAGTGACTCCCTCAACCCAGAAGAATTG
GATGATGCTTTCATCGTTGACGTACCTGCCGCGCCTGCGAATGTCTTCCT
CATTCGTGCCACTCTTTTCCGCGACGCTACCCTACTCTGCTTCGGCATTA
GTCACCATTTGGCTGACGGCACTGCCGCCTACGACGTGATTCGGGCCTAT
TGTGACCTGCTTGCCGGGAGCCCCATCCCATCGTTGCTGCTCCCACCCGA
TGCGTGTGGCCAGCGAATGTCGGACCGGGTGCTTCTCAACGACAAGCACG
AAAGGTCACTTCGGTCTATAACCTACGCAGAGCATCTGGCCAACTTCACC
GCTGGGTTCTGGCCGATCTTACTGCTCATGATCAGAGTAATTATATGCCT
GCTGCTGCGCAAGCTATGTCTGCAGGAAACCCTGGAGGAAAGGTACATTT
ACCTCCCGGACGACTGGGTTGGCGCCGTGCACAAAGGAGCACTCAATACC
CTCGCTGCCATGCCTGTGGGTGCCCAGCCCTCGTGGGATACCCAGCCGAC
CAGGAACAACATTATCAATGCCTGGTTCCTCAAATGGGTCTACAGTGCTA
TCCCGAGCAGTCGAGCTGACATGTATTTCTATGGTCCGCTCAGCTATCGG
GGTGTGGTTGAGCCTCCCCAGCCAGGGGCCTACTGGATTCATAACAGTAT
CGGGCTCGTGCGGCACAAGCTGTCAGTGGCTCAGATCCAGAACGAGCCTG
TGGCTATGCTGGCGGGCCGACTCCGCTTGGCCAGCTTGCGGTTCACCTGC
CCGGCATCCATCAAGGCGTTTCTGCAGATGTGCGAGGATCATGCGTCACA
GCAGATGCTGCCGAGAATCCCCGCCAAGGGACGAATACCGATGGTGATGG
TCACCACATGGACAGGGTTCGATTTCGCATGCTTGGACTTTTCGAGCGCC
GCGTGCGACCGGAGCAAACCAGCCAAAGTCCTCTTCATCCATCCCCTTGT
TCGGAGCCTGCGACAGGGAGTGTGGCCCTCTGCATATACGCTGAAGAGTG
CGCAGGGTGGTGGGTACTGGCTGCGAGCCTGGAATACTTTATCGGGATGG
AAGAAGTTCAGTCAAATGGTGGATGTCGATACTCTATGAATGTCGGGCGG
AAGAAGGAACAACGTTCGCGCCACGGAGGAAATCAAATATCGTTGTCGAA
CTGTCCACCCTCTTACTTGCAATGCCATGGTATTCACAGGACTTATCGTG
GACGCGCAGCTCGATGAAGTTGTGTTAAGGCAGACGGCGGCTCAGCTGGT
GAAGGCGTGGCCTGCTCTGGGTGGACAGCTTTACCGGTCGAGCCGCCCGT
ATGCACTCTCATCGGGCTCGACTGTCGACTTTGAAAGTCGGACGCTCCCC
AAAAGTGCAACATCCTGGAAACGAGGCATATTTCATTCCAGAGAATGCAA
TCAGCCGATCATTAGTGACTCCCTCAACCCAGAAGAATTGGATGATGCTT
TCATCGTTGACGTACCTGCCGCGCCTGCGAATGTCTTCCTCATTCGTGCC
ACTCTTTTCCGCGACGCTACCCTACTCTGCTTCGGCATTAGTCACCATTT
GGCTGACGGCACTGCCGCCTACGACGTGATTCGGGCCTATTGTGACCTGC
TTGCCGGGAGCCCCATCCCATCGTTGCTGCTCCCACCCGATGCGTGTGGC
CAGCGAATGTCGGACCGGGTGCTTCTCAACGACAAGCACGAAAGGTCACT
TCGGTCTATAACCTACGCAGAGCATCTGGCCAACTTCACCGCTGGGTTCT
GGCCGATCTTACTGCTCATGATCAGAGTAATTATATGCCTGCTGCTGCGC
AAGCTATGTCTGCAGGAAACCCTGGAGGAAAGGTACATTTACCTCCCGGA
CGACTGGGTTGGCGCCGTGCACAAAGGAGCACTCAATACCCTCGCTGCCA
TGCCTGTGGGTGCCCAGCCCTCGTGGGATACCCAGCCGACCAGGAACAAC
ATTATCAATGCCTGGTTCCTCAAATGGGTCTACAGTGCTATCCCGAGCAG
TCGAGCTGACATGTATTTCTATGGTCCGCTCAGCTATCGGGGTGTGGTTG
AGCCTCCCCAGCCAGGGGCCTACTGGATTCATAACAGTATCGGGCTCGTG
CGGCACAAGCTGTCAGTGGCTCAGATCCAGAACGAGCCTGTGGCTATGCT
GGCGGGCCGACTCCGCTTGGCCAGCTTGCGGTTCACCTGCCCGGCATCCA
TCAAGGCGTTTCTGCAGATGTGCGAGGATCATGCGTCACAGCAGATGCTG
CCGAGAATCCCCGCCAAGGGACGAATACCGATGGTGATGGTCACCACATG
GACAGGGTTCGATTTCGCATGCTTGGACTTTTCGAGCGCCGCGTGCGACC
GGAGCAAACCAGCCAAAGTCCTCTTCATCCATCCCCTTGTTCGGAGCCTG
CGACAGGGAGTGTGGCCCTCTGCATATACGCTGAAGAGTGCGCAGGGTGG
TGGGTACTGGCTGCGAGCCTGGAATACTTTATCGGGATGGAAGAAGTTCA
GTCAAATGGTGGATGTCGATACTCTATGAATGTCGGGCGGAAGAAGGAAC
AACGTTCGCGCCACGGAGGAAATCAAATATCGTTGTCGAACTGTCCACCC
TCTTACTTGCAATGCCATGGTATTCACAGGACTTATCGTGGACGCGCAGC
TCGATGAAGTTGTGTTAAGGCAGACGGCGGCTCAGCTGGTGAAGGCGTGG
CCTGCTCTGGGTGGACAGCTTTACCGGTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006666-T1.utr3p1 | KJC3_006666-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023213 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:36727..38337 - |
|
