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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:46577..48847+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006670-T1 ID=KJC3_006670-T1|Name=KJC3_006670-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2271bp|location=Sequence derived from alignment at ch5:46577..48847+ (Aspergillus niger KJC3) CAGGCATCCAGGTGAACTTCCATAGGGAGCTGAATCTCCTGAAGGAGGTA
TCAGGCATGGATCATATGAAAGCTTTCCACCTCGGACCCCAAGCTGATCT
ACAGAACGCGTGAAACGCAGCCCATCGCCTTGCTGTTCCATGGAAAGCTT
GGCCCTAGTTTCTTGATCCAGCCCCGGAATTGCCGACATCAAGGGGCCCC
CGGCATTTCCGTTTCCTCGGGAAGACGTGAGAGTGTAGAATCCTTCCAGG
TTGCCAGGTTGTACCCCACGGGGTAGACCCTCCCTGACTGGGGCCCTGGT
CGCCTCCCCTGTTCATTTATGGGGCATGGGTTTCACCTATATTTCCATCA
AGCCTCGTTACATCTCTGGCGCCATCCATTGCAACGCACTCAGGACTCAA
CCAGCAGAATAGTCCATCGTTGAGTGCCACGATGTCCACCGACCTAAAAT
CGGAGTCGAGCCATCTCGAGGTGGTGGACCAGCAGCCCCGTCAACCAGAC
AGTGGAATACTGGGGATCCACGACCCAGCTAACCAGCATGGCCGTTCGAC
GTGGCAAGCACTCCGGGCGAATCCTATTGTGATCCCCTTCTGCCTGTATG
GCAATATCGGGGCTTTGATGTACGGCTTCGATAATCTAGTCCTGTCGCTG
GCTCTGTCAATGACTGCTTTTGAGTGAGTACGGACGACCTAGCCTCTGGT
GTGGATCTGTCGTAACTCACAATATGAATAACAGACAGACATTTGGTACC
CTCACAAACGGTTCTTACGTGATCCCCGCATACTGGCAGTCCCTGTGGAA
CGCCCTGTCCCAAGTCGCCACGATGCTCGGATCAACAGCCGCAGGTCCCA
TCCAGGATATGTTTGGACGTCGAGCAGCCTTCCTCGTGGCGGCATGTCTG
TCTGCTGCCGGTATTGCAGTCGTGTACACGGCTTCGACTCCGGGCGCGTT
TCTTGCCGGAAAGATCGTCAATGGCTTGTCGTTGGGTCTGGCTCTGACCA
CGGGGCAGACGTATATTTCGGAGATCACCTCGCTTGAGGTGCGAGGTATC
GCTCTTTCGGGGTATACGTTCTGCATGGTACGTTTGTTCGAGTCAATTAG
TAAGTGACGGTGGTATTGACAATGATTTCGCAGAACCTTGGTTATCTCAT
CGCCGCATCTGTGGCTCTTCCGCGCATGTCAATGTCCAGCGATGCAGCAT
ACAAGGTATGGATAAAACAATCTGCTTCAGATTACCCTCAGAAACTGACA
ATCCAGGTCCTCTTCGCCTCCGGCTGGGTCTGGCCCGGAGTCATTCTCCT
CTTCCTCCCATTCATGCCCGAATCCCCGTACTTCCTAGTCATGAAAGGCC
AGCGCGAAAAGGCTGGCCGCATGCTATCCCGACTGGGCAACCATGCCTCC
GAGACGCCGCTCATTCTCGCAGACATCGTCCGCACACACGAGGAAGAGCA
ACAGCGCAACGAAGCAGCCAAGGAAGCCAGCTTCCTGGAATGCTTCAAGG
GAGTTAATTGGCGACGCACGCGGATCATCCTCTACTGCAATGCGCTATCG
CAGGTCATCGGGTCCAGCTTCATGACCAATGGGCCGTACTTCCTCGTGCA
GGCGGGCATGTCCTCTGCCAAGACGGGGATGATGACGGAGATTGGTATTG
CGTTTGGGATTGCCAGTTCGCTAGTCACAGGATATGTAATGACAGTTTGT
GGGAGACGGGCGCTGGTCATGTTCGGCATTGGGCTCTCGACGATGCTGTT
CACGGTCATGGGGATAGCGGGGTGTTTCCCACATTCGAGTCCGGCGTTAT
GGTGAGCCCTTCTTCCCCTAATCGCCACTTCATCCTTTGATACCTTTCTA
ACAATGATATTTCAGGGTGGTCGGCATCTTCCTCGAGCTCTCCTGGTGGG
TCTACGGCCCCGCCATCGGCCCAGCCATGGCCATTGCAGGTGAAGTTTCA
TCGGTACGACTACGTGCTAAGTCACTGGCCATCGGGTTTACGTTCAACTA
TTTCTTCTCGACGGTATGGAACGTGGTGATGCCGTATCTGTATAACAGTG
ACGAGGCGGATCTGGGGGGTTTGATCGGGTGGATCTTTGCGGGCATGGGG
GCTGTCACGCTGTTGATTCTGTTCTTTGAACTTCCTGAGACCAAGGGGAG
GAGCTTTGAGGAGCTGGATGAGATGTTTGCAGCGGGGGTGCCGACGAGGC
AGTTTCAGCGGTATCAATGCGAGGTGGGGCAGGGGTATGGGGGGAAGGTG
GTGCATGATGGCGAGGATTAG back to topCoding sequence (CDS) from alignment at ch5:46577..48847+ >KJC3_006670-T1 ID=KJC3_006670-T1|Name=KJC3_006670-T1|organism=Aspergillus niger KJC3|type=CDS|length=8040bp|location=Sequence derived from alignment at ch5:46577..48847+ (Aspergillus niger KJC3) ATGTCCACCGACCTAAAATCGGAGTCGAGCCATCTCGAGGTGGTGGACCA GCAGCCCCGTCAACCAGACAGTGGAATACTGGGGATCCACGACCCAGCTA ACCAGCATGGCCGTTCGACGTGGCAAGCACTCCGGGCGAATCCTATTGTG ATCCCCTTCTGCCTGTATGGCAATATCGGGGCTTTGATGTACGGCTTCGA TAATCTAGTCCTGTCGCTGGCTCTGTCAATGACTGCTTTTGAACAGACAT TTGGTACCCTCACAAACGGTTCTTACGTGATCCCCGCATACTGGCAGTCC CTGTGGAACGCCCTGTCCCAAGTCGCCACGATGCTCGGATCAACAGCCGC AGGTCCCATCCAGGATATGTTTGGACGTCGAGCAGCCTTCCTCGTGGCGG CATGTCTGTCTGCTGCCGGTATTGCAGTCGTGTACACGGCTTCGACTCCG GGCGCGTTTCTTGCCGGAAAGATCGTCAATGGCTTGTCGTTGGGTCTGGC TCTGACCACGGGGCAGACGTATATTTCGGAGATCACCTCGCTTGAGGTGC GAGGTATCGCTCTTTCGGGGTATACGTTCTGCATGAACCTTGGTTATCTC ATCGCCGCATCTGTGGCTCTTCCGCGCATGTCAATGTCCAGCGATGCAGC ATACAAGGTCCTCTTCGCCTCCGGCTGGGTCTGGCCCGGAGTCATTCTCC TCTTCCTCCCATTCATGCCCGAATCCCCGTACTTCCTAGTCATGAAAGGC CAGCGCGAAAAGGCTGGCCGCATGCTATCCCGACTGGGCAACCATGCCTC CGAGACGCCGCTCATTCTCGCAGACATCGTCCGCACACACGAGGAAGAGC AACAGCGCAACGAAGCAGCCAAGGAAGCCAGCTTCCTGGAATGCTTCAAG GGAGTTAATTGGCGACGCACGCGGATCATCCTCTACTGCAATGCGCTATC GCAGGTCATCGGGTCCAGCTTCATGACCAATGGGCCGTACTTCCTCGTGC AGGCGGGCATGTCCTCTGCCAAGACGGGGATGATGACGGAGATTGGTATT GCGTTTGGGATTGCCAGTTCGCTAGTCACAGGATATGTAATGACAGTTTG TGGGAGACGGGCGCTGGTCATGTTCGGCATTGGGCTCTCGACGATGCTGT TCACGGTCATGGGGATAGCGGGGTGTTTCCCACATTCGAGTCCGGCGTTA TGGGTGGTCGGCATCTTCCTCGAGCTCTCCTGGTGGGTCTACGGCCCCGC CATCGGCCCAGCCATGGCCATTGCAGGTGAAGTTTCATCGGTACGACTAC GTGCTAAGTCACTGGCCATCGGGTTTACGTTCAACTATTTCTTCTCGACG GTATGGAACGTGGTGATGCCGTATCTGTATAACAGTGACGAGGCGGATCT GGGGGGTTTGATCGGGTGGATCTTTGCGGGCATGGGGGCTGTCACGCTGT TGATTCTGTTCTTTGAACTTCCTGAGACCAAGGGGAGGAGCTTTGAGGAG CTGGATGAGATGTTTGCAGCGGGGGTGCCGACGAGGCAGTTTCAGCGGTA TCAATGCGAGGTGGGGCAGGGGTATGGGGGGAAGGTGGTGCATGATGGCG AGGATTAGATGTCCACCGACCTAAAATCGGAGTCGAGCCATCTCGAGGTG GTGGACCAGCAGCCCCGTCAACCAGACAGTGGAATACTGGGGATCCACGA CCCAGCTAACCAGCATGGCCGTTCGACGTGGCAAGCACTCCGGGCGAATC CTATTGTGATCCCCTTCTGCCTGTATGGCAATATCGGGGCTTTGATGTAC GGCTTCGATAATCTAGTCCTGTCGCTGGCTCTGTCAATGACTGCTTTTGA ACAGACATTTGGTACCCTCACAAACGGTTCTTACGTGATCCCCGCATACT GGCAGTCCCTGTGGAACGCCCTGTCCCAAGTCGCCACGATGCTCGGATCA ACAGCCGCAGGTCCCATCCAGGATATGTTTGGACGTCGAGCAGCCTTCCT CGTGGCGGCATGTCTGTCTGCTGCCGGTATTGCAGTCGTGTACACGGCTT CGACTCCGGGCGCGTTTCTTGCCGGAAAGATCGTCAATGGCTTGTCGTTG GGTCTGGCTCTGACCACGGGGCAGACGTATATTTCGGAGATCACCTCGCT TGAGGTGCGAGGTATCGCTCTTTCGGGGTATACGTTCTGCATGAACCTTG GTTATCTCATCGCCGCATCTGTGGCTCTTCCGCGCATGTCAATGTCCAGC GATGCAGCATACAAGGTCCTCTTCGCCTCCGGCTGGGTCTGGCCCGGAGT CATTCTCCTCTTCCTCCCATTCATGCCCGAATCCCCGTACTTCCTAGTCA TGAAAGGCCAGCGCGAAAAGGCTGGCCGCATGCTATCCCGACTGGGCAAC CATGCCTCCGAGACGCCGCTCATTCTCGCAGACATCGTCCGCACACACGA GGAAGAGCAACAGCGCAACGAAGCAGCCAAGGAAGCCAGCTTCCTGGAAT GCTTCAAGGGAGTTAATTGGCGACGCACGCGGATCATCCTCTACTGCAAT GCGCTATCGCAGGTCATCGGGTCCAGCTTCATGACCAATGGGCCGTACTT CCTCGTGCAGGCGGGCATGTCCTCTGCCAAGACGGGGATGATGACGGAGA TTGGTATTGCGTTTGGGATTGCCAGTTCGCTAGTCACAGGATATGTAATG ACAGTTTGTGGGAGACGGGCGCTGGTCATGTTCGGCATTGGGCTCTCGAC GATGCTGTTCACGGTCATGGGGATAGCGGGGTGTTTCCCACATTCGAGTC CGGCGTTATGGGTGGTCGGCATCTTCCTCGAGCTCTCCTGGTGGGTCTAC GGCCCCGCCATCGGCCCAGCCATGGCCATTGCAGGTGAAGTTTCATCGGT ACGACTACGTGCTAAGTCACTGGCCATCGGGTTTACGTTCAACTATTTCT TCTCGACGGTATGGAACGTGGTGATGCCGTATCTGTATAACAGTGACGAG GCGGATCTGGGGGGTTTGATCGGGTGGATCTTTGCGGGCATGGGGGCTGT CACGCTGTTGATTCTGTTCTTTGAACTTCCTGAGACCAAGGGGAGGAGCT TTGAGGAGCTGGATGAGATGTTTGCAGCGGGGGTGCCGACGAGGCAGTTT CAGCGGTATCAATGCGAGGTGGGGCAGGGGTATGGGGGGAAGGTGGTGCA TGATGGCGAGGATTAGATGTCCACCGACCTAAAATCGGAGTCGAGCCATC TCGAGGTGGTGGACCAGCAGCCCCGTCAACCAGACAGTGGAATACTGGGG ATCCACGACCCAGCTAACCAGCATGGCCGTTCGACGTGGCAAGCACTCCG GGCGAATCCTATTGTGATCCCCTTCTGCCTGTATGGCAATATCGGGGCTT TGATGTACGGCTTCGATAATCTAGTCCTGTCGCTGGCTCTGTCAATGACT GCTTTTGAACAGACATTTGGTACCCTCACAAACGGTTCTTACGTGATCCC CGCATACTGGCAGTCCCTGTGGAACGCCCTGTCCCAAGTCGCCACGATGC TCGGATCAACAGCCGCAGGTCCCATCCAGGATATGTTTGGACGTCGAGCA GCCTTCCTCGTGGCGGCATGTCTGTCTGCTGCCGGTATTGCAGTCGTGTA CACGGCTTCGACTCCGGGCGCGTTTCTTGCCGGAAAGATCGTCAATGGCT TGTCGTTGGGTCTGGCTCTGACCACGGGGCAGACGTATATTTCGGAGATC ACCTCGCTTGAGGTGCGAGGTATCGCTCTTTCGGGGTATACGTTCTGCAT GAACCTTGGTTATCTCATCGCCGCATCTGTGGCTCTTCCGCGCATGTCAA TGTCCAGCGATGCAGCATACAAGGTCCTCTTCGCCTCCGGCTGGGTCTGG CCCGGAGTCATTCTCCTCTTCCTCCCATTCATGCCCGAATCCCCGTACTT CCTAGTCATGAAAGGCCAGCGCGAAAAGGCTGGCCGCATGCTATCCCGAC TGGGCAACCATGCCTCCGAGACGCCGCTCATTCTCGCAGACATCGTCCGC ACACACGAGGAAGAGCAACAGCGCAACGAAGCAGCCAAGGAAGCCAGCTT CCTGGAATGCTTCAAGGGAGTTAATTGGCGACGCACGCGGATCATCCTCT ACTGCAATGCGCTATCGCAGGTCATCGGGTCCAGCTTCATGACCAATGGG CCGTACTTCCTCGTGCAGGCGGGCATGTCCTCTGCCAAGACGGGGATGAT GACGGAGATTGGTATTGCGTTTGGGATTGCCAGTTCGCTAGTCACAGGAT ATGTAATGACAGTTTGTGGGAGACGGGCGCTGGTCATGTTCGGCATTGGG CTCTCGACGATGCTGTTCACGGTCATGGGGATAGCGGGGTGTTTCCCACA TTCGAGTCCGGCGTTATGGGTGGTCGGCATCTTCCTCGAGCTCTCCTGGT GGGTCTACGGCCCCGCCATCGGCCCAGCCATGGCCATTGCAGGTGAAGTT TCATCGGTACGACTACGTGCTAAGTCACTGGCCATCGGGTTTACGTTCAA CTATTTCTTCTCGACGGTATGGAACGTGGTGATGCCGTATCTGTATAACA GTGACGAGGCGGATCTGGGGGGTTTGATCGGGTGGATCTTTGCGGGCATG GGGGCTGTCACGCTGTTGATTCTGTTCTTTGAACTTCCTGAGACCAAGGG GAGGAGCTTTGAGGAGCTGGATGAGATGTTTGCAGCGGGGGTGCCGACGA GGCAGTTTCAGCGGTATCAATGCGAGGTGGGGCAGGGGTATGGGGGGAAG GTGGTGCATGATGGCGAGGATTAGATGTCCACCGACCTAAAATCGGAGTC GAGCCATCTCGAGGTGGTGGACCAGCAGCCCCGTCAACCAGACAGTGGAA TACTGGGGATCCACGACCCAGCTAACCAGCATGGCCGTTCGACGTGGCAA GCACTCCGGGCGAATCCTATTGTGATCCCCTTCTGCCTGTATGGCAATAT CGGGGCTTTGATGTACGGCTTCGATAATCTAGTCCTGTCGCTGGCTCTGT CAATGACTGCTTTTGAACAGACATTTGGTACCCTCACAAACGGTTCTTAC GTGATCCCCGCATACTGGCAGTCCCTGTGGAACGCCCTGTCCCAAGTCGC CACGATGCTCGGATCAACAGCCGCAGGTCCCATCCAGGATATGTTTGGAC GTCGAGCAGCCTTCCTCGTGGCGGCATGTCTGTCTGCTGCCGGTATTGCA GTCGTGTACACGGCTTCGACTCCGGGCGCGTTTCTTGCCGGAAAGATCGT CAATGGCTTGTCGTTGGGTCTGGCTCTGACCACGGGGCAGACGTATATTT CGGAGATCACCTCGCTTGAGGTGCGAGGTATCGCTCTTTCGGGGTATACG TTCTGCATGAACCTTGGTTATCTCATCGCCGCATCTGTGGCTCTTCCGCG CATGTCAATGTCCAGCGATGCAGCATACAAGGTCCTCTTCGCCTCCGGCT GGGTCTGGCCCGGAGTCATTCTCCTCTTCCTCCCATTCATGCCCGAATCC CCGTACTTCCTAGTCATGAAAGGCCAGCGCGAAAAGGCTGGCCGCATGCT ATCCCGACTGGGCAACCATGCCTCCGAGACGCCGCTCATTCTCGCAGACA TCGTCCGCACACACGAGGAAGAGCAACAGCGCAACGAAGCAGCCAAGGAA GCCAGCTTCCTGGAATGCTTCAAGGGAGTTAATTGGCGACGCACGCGGAT CATCCTCTACTGCAATGCGCTATCGCAGGTCATCGGGTCCAGCTTCATGA CCAATGGGCCGTACTTCCTCGTGCAGGCGGGCATGTCCTCTGCCAAGACG GGGATGATGACGGAGATTGGTATTGCGTTTGGGATTGCCAGTTCGCTAGT CACAGGATATGTAATGACAGTTTGTGGGAGACGGGCGCTGGTCATGTTCG GCATTGGGCTCTCGACGATGCTGTTCACGGTCATGGGGATAGCGGGGTGT TTCCCACATTCGAGTCCGGCGTTATGGGTGGTCGGCATCTTCCTCGAGCT CTCCTGGTGGGTCTACGGCCCCGCCATCGGCCCAGCCATGGCCATTGCAG GTGAAGTTTCATCGGTACGACTACGTGCTAAGTCACTGGCCATCGGGTTT ACGTTCAACTATTTCTTCTCGACGGTATGGAACGTGGTGATGCCGTATCT GTATAACAGTGACGAGGCGGATCTGGGGGGTTTGATCGGGTGGATCTTTG CGGGCATGGGGGCTGTCACGCTGTTGATTCTGTTCTTTGAACTTCCTGAG ACCAAGGGGAGGAGCTTTGAGGAGCTGGATGAGATGTTTGCAGCGGGGGT GCCGACGAGGCAGTTTCAGCGGTATCAATGCGAGGTGGGGCAGGGGTATG GGGGGAAGGTGGTGCATGATGGCGAGGATTAGATGTCCACCGACCTAAAA TCGGAGTCGAGCCATCTCGAGGTGGTGGACCAGCAGCCCCGTCAACCAGA CAGTGGAATACTGGGGATCCACGACCCAGCTAACCAGCATGGCCGTTCGA CGTGGCAAGCACTCCGGGCGAATCCTATTGTGATCCCCTTCTGCCTGTAT GGCAATATCGGGGCTTTGATGTACGGCTTCGATAATCTAGTCCTGTCGCT GGCTCTGTCAATGACTGCTTTTGAACAGACATTTGGTACCCTCACAAACG GTTCTTACGTGATCCCCGCATACTGGCAGTCCCTGTGGAACGCCCTGTCC CAAGTCGCCACGATGCTCGGATCAACAGCCGCAGGTCCCATCCAGGATAT GTTTGGACGTCGAGCAGCCTTCCTCGTGGCGGCATGTCTGTCTGCTGCCG GTATTGCAGTCGTGTACACGGCTTCGACTCCGGGCGCGTTTCTTGCCGGA AAGATCGTCAATGGCTTGTCGTTGGGTCTGGCTCTGACCACGGGGCAGAC GTATATTTCGGAGATCACCTCGCTTGAGGTGCGAGGTATCGCTCTTTCGG GGTATACGTTCTGCATGAACCTTGGTTATCTCATCGCCGCATCTGTGGCT CTTCCGCGCATGTCAATGTCCAGCGATGCAGCATACAAGGTCCTCTTCGC CTCCGGCTGGGTCTGGCCCGGAGTCATTCTCCTCTTCCTCCCATTCATGC CCGAATCCCCGTACTTCCTAGTCATGAAAGGCCAGCGCGAAAAGGCTGGC CGCATGCTATCCCGACTGGGCAACCATGCCTCCGAGACGCCGCTCATTCT CGCAGACATCGTCCGCACACACGAGGAAGAGCAACAGCGCAACGAAGCAG CCAAGGAAGCCAGCTTCCTGGAATGCTTCAAGGGAGTTAATTGGCGACGC ACGCGGATCATCCTCTACTGCAATGCGCTATCGCAGGTCATCGGGTCCAG CTTCATGACCAATGGGCCGTACTTCCTCGTGCAGGCGGGCATGTCCTCTG CCAAGACGGGGATGATGACGGAGATTGGTATTGCGTTTGGGATTGCCAGT TCGCTAGTCACAGGATATGTAATGACAGTTTGTGGGAGACGGGCGCTGGT CATGTTCGGCATTGGGCTCTCGACGATGCTGTTCACGGTCATGGGGATAG CGGGGTGTTTCCCACATTCGAGTCCGGCGTTATGGGTGGTCGGCATCTTC CTCGAGCTCTCCTGGTGGGTCTACGGCCCCGCCATCGGCCCAGCCATGGC CATTGCAGGTGAAGTTTCATCGGTACGACTACGTGCTAAGTCACTGGCCA TCGGGTTTACGTTCAACTATTTCTTCTCGACGGTATGGAACGTGGTGATG CCGTATCTGTATAACAGTGACGAGGCGGATCTGGGGGGTTTGATCGGGTG GATCTTTGCGGGCATGGGGGCTGTCACGCTGTTGATTCTGTTCTTTGAAC TTCCTGAGACCAAGGGGAGGAGCTTTGAGGAGCTGGATGAGATGTTTGCA GCGGGGGTGCCGACGAGGCAGTTTCAGCGGTATCAATGCGAGGTGGGGCA GGGGTATGGGGGGAAGGTGGTGCATGATGGCGAGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006670-T1.utr5p1 | KJC3_006670-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR005829 |
DBxref | InterPro:IPR005828 |
DBxref | PFAM:PF00083 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch5 | supercontig | ch5:46577..48847 + |
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