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KJC3_006684-T1, KJC3_006684-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006684-T1
Unique NameKJC3_006684-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:91220..91791-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006684-T1 ID=KJC3_006684-T1|Name=KJC3_006684-T1|organism=Aspergillus niger KJC3|type=mRNA|length=572bp|location=Sequence derived from alignment at ch5:91220..91791- (Aspergillus niger KJC3)
ATGGCCTCCTCGCAAACAACCCACCGGCTCCTCCGCGAACTAAAAGACTA
CACCAACTCGCCCAACGAAGCCCTTCTGCACCTCGGCCCCGTCGACGAAG
ATGACCTCCTCCACTGGGAAGCAGTGCTGAAGGGTGTCCAGGGGACGCCT
TACGAGAGTATACCACCCCCCTTCCTCCCCACATACATACATACCATTCA
TTCCCTCCACACTAACTTCTTCTCCCCCCGCCTCTCGGGGGGAAATAAAT
AGATGGTCTCTGGACCCTCTCCATCCAAATCCCACCAACCTACCCCCTCA
CGCCGCCGAAAATCACCTTCAAGACGAAGATCAGCCATCCGAATATCAGC
TTCACAACGGGAGAGATTTGTTTGACGTTGTTGACTACCGAGCATTGGAG
TCCGGTGTATACGTTGAGCAGTACGTTGAGTGCGATTCATCAGCTGTTGA
CGGATCCGAGGCCGGATTCGCCGCTTAATGTTGATGTCGCGGCGTTGTTG
AGGGATGGGGATGTGGCGGCGTGGGAGAGTTTGGTCAGGTTTTGGACGGA
GGAGGAGAGGGCTACTCTATAA
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Coding sequence (CDS) from alignment at ch5:91220..91791-

>KJC3_006684-T1 ID=KJC3_006684-T1|Name=KJC3_006684-T1|organism=Aspergillus niger KJC3|type=CDS|length=954bp|location=Sequence derived from alignment at ch5:91220..91791- (Aspergillus niger KJC3)
ATGGTCTCTGGACCCTCTCCATCCAAATCCCACCAACCTACCCCCTCACG
CCGCCGAAAATCACCTTCAAGACGAAGATCAGCCATCCGAATATCAGCTT
CACAACGGGAGAGATTTGTTTGACGTTGTTGACTACCGAGCATTGGAGTC
CGGTGTATACGTTGAGCAGTACGTTGAGTGCGATTCATCAGCTGTTGACG
GATCCGAGGCCGGATTCGCCGCTTAATGTTGATGTCGCGGCGTTGTTGAG
GGATGGGGATGTGGCGGCGTGGGAGAGTTTGGTCAGGTTTTGGACGGAGG
AGGAGAGGGCTACTCTATAAATGGCCTCCTCGCAAACAACCCACCGGCTC
CTCCGCGAACTAAAAGACTACACCAACTCGCCCAACGAAGCCCTTCTGCA
CCTCGGCCCCGTCGACGAAGATGACCTCCTCCACTGGGAAGCAGTGCTGA
AGGGTGTCCAGGGGACGCCTTACGAGAATGGTCTCTGGACCCTCTCCATC
CAAATCCCACCAACCTACCCCCTCACGCCGCCGAAAATCACCTTCAAGAC
GAAGATCAGCCATCCGAATATCAGCTTCACAACGGGAGAGATTTGTTTGA
CGTTGTTGACTACCGAGCATTGGAGTCCGGTGTATACGTTGAGCAGTACG
TTGAGTGCGATTCATCAGCTGTTGACGGATCCGAGGCCGGATTCGCCGCT
TAATGTTGATGTCGCGGCGTTGTTGAGGGATGGGGATGTGGCGGCGTGGG
AGAGTTTGGTCAGGTTTTGGACGGAGGAGGAGAGGGCTACTCTATAAATG
GCCTCCTCGCAAACAACCCACCGGCTCCTCCGCGAACTAAAAGACTACAC
CAACTCGCCCAACGAAGCCCTTCTGCACCTCGGCCCCGTCGACGAAGATG
ACCTCCTCCACTGGGAAGCAGTGCTGAAGGGTGTCCAGGGGACGCCTTAC
GAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006684KJC3_006684Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006684-T1KJC3_006684-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006684-T1.cdsKJC3_006684-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006684-T1.exon2KJC3_006684-T1.exon2Aspergillus niger KJC3exon
KJC3_006684-T1.exon1KJC3_006684-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:91220..91791 -
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