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KJC3_006685-T1, KJC3_006685-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006685-T1
Unique NameKJC3_006685-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:92216..93475+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006685-T1 ID=KJC3_006685-T1|Name=KJC3_006685-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1260bp|location=Sequence derived from alignment at ch5:92216..93475+ (Aspergillus niger KJC3)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTCTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGCTCGGCTCAGGCTGCTAGTC
TCCTTCAGGGCTTTGCTTTTGGTGGTGGCACTGCCCCGGATGCATCTGTC
AGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATATCGA
GGATATCGTAGAGCCGCCGGCGAAACGTCGCAAGAGTGCTTTGAGCAGTT
CTGTCACGAGGACGAGTGCGCGCTCTACTCGGAGGGCTGTCAAAGCAGAG
CCCCCTGTCAAAGAGGAGGCGCCTGTCAAAGAGGAAGCACCTGTCAAGGA
AGAGCCGGTCGAGAAGCCGCAAAAGGCACGACGGATGCCCGCGCGCAAGA
TCAAAATCGAGAATGGCGGTTATTCCATGGAGCCGCCGTCTAACTGGGAG
ACTATGTATGACATGGTCAAGAAGATGCGAGAGGCAAATCCCACTGCACC
CGTTGACACCATGGGCTGTGCCGAACTCTACTGGCGTGCATCCTCTCCGC
GCGATCGCCGTTTCCAGACTCTCATCGCGCTAATGCTATCATCCCAGACC
AAGGACACAGTCACGGCGGTGGCCATGCAGCGGTTGCACACGGAGCTTGG
AGACCAGTCGACAACCATTGTGAAGAAGGAGCCCGAAGATTATGACTGGA
AGCCCACGGACCAGGTCAAGGACAGCACTTTGAACCTGGAGAACATCCTA
GCCGTCACCCCTGAGCGCCTGAACGAACTTATTGCCAAGGTGGGCTTCCA
CAACAACAAGACCAAGTATATCAAGGCCGCGGCCATCATCCTCCGCGATC
AATATGACTCCGATATCCCGTCGACTGCTCCTGAACTGATGAAGCTCCCG
GGCGTCGGTCCGAAGATGGCGTTTCTCTGTATGAGCGCGGCGTGGGGCAA
GCACGAAGGCATTGGCGTTGATGTTCACGTTCACCGGATTACCAACCTCT
GGGGCTGGCACAAGACGAAGAATCCCGAGGAAACTCGCATGGCGCTGGAG
TCGTGGCTACCAAAAGACAAGTGGCACGAGATCAACAAACTCTTGGTCGG
CCTAGGACAGACGGTCTGCTTACCTGTAGCCCGGAGATGCGGAGAATGCG
ATCTTGCAGGAACGAAGCTCTGTAAGAGCGAAATCAAGGGTCTGGTAACA
CTGAAGCGAGACGCTGCTGTGAAGCAGGAGGAGCCGAAGGTGAAGGTCGA
GCAGGAGTAG
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Coding sequence (CDS) from alignment at ch5:92216..93475+

>KJC3_006685-T1 ID=KJC3_006685-T1|Name=KJC3_006685-T1|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch5:92216..93475+ (Aspergillus niger KJC3)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTCTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGCTCGGCTCAGGCTGCTAGTC
TCCTTCAGGGCTTTGCTTTTGGTGGTGGCACTGCCCCGGATGCATCTGTC
AGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATATCGA
GGATATCGTAGAGCCGCCGGCGAAACGTCGCAAGAGTGCTTTGAGCAGTT
CTGTCACGAGGACGAGTGCGCGCTCTACTCGGAGGGCTGTCAAAGCAGAG
CCCCCTGTCAAAGAGGAGGCGCCTGTCAAAGAGGAAGCACCTGTCAAGGA
AGAGCCGGTCGAGAAGCCGCAAAAGGCACGACGGATGCCCGCGCGCAAGA
TCAAAATCGAGAATGGCGGTTATTCCATGGAGCCGCCGTCTAACTGGGAG
ACTATGTATGACATGGTCAAGAAGATGCGAGAGGCAAATCCCACTGCACC
CGTTGACACCATGGGCTGTGCCGAACTCTACTGGCGTGCATCCTCTCCGC
GCGATCGCCGTTTCCAGACTCTCATCGCGCTAATGCTATCATCCCAGACC
AAGGACACAGTCACGGCGGTGGCCATGCAGCGGTTGCACACGGAGCTTGG
AGACCAGTCGACAACCATTGTGAAGAAGGAGCCCGAAGATTATGACTGGA
AGCCCACGGACCAGGTCAAGGACAGCACTTTGAACCTGGAGAACATCCTA
GCCGTCACCCCTGAGCGCCTGAACGAACTTATTGCCAAGGTGGGCTTCCA
CAACAACAAGACCAAGTATATCAAGGCCGCGGCCATCATCCTCCGCGATC
AATATGACTCCGATATCCCGTCGACTGCTCCTGAACTGATGAAGCTCCCG
GGCGTCGGTCCGAAGATGGCGTTTCTCTGTATGAGCGCGGCGTGGGGCAA
GCACGAAGGCATTGGCGTTGATGTTCACGTTCACCGGATTACCAACCTCT
GGGGCTGGCACAAGACGAAGAATCCCGAGGAAACTCGCATGGCGCTGGAG
TCGTGGCTACCAAAAGACAAGTGGCACGAGATCAACAAACTCTTGGTCGG
CCTAGGACAGACGGTCTGCTTACCTGTAGCCCGGAGATGCGGAGAATGCG
ATCTTGCAGGAACGAAGCTCTGTAAGAGCGAAATCAAGGGTCTGGTAACA
CTGAAGCGAGACGCTGCTGTGAAGCAGGAGGAGCCGAAGGTGAAGGTCGA
GCAGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0019104DNA N-glycosylase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006285base-excision repair, AP site formation
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NTH1KJC3_006685Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006685-T1.exon1KJC3_006685-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006685-T1.cdsKJC3_006685-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006685-T1KJC3_006685-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263R4M
DBxrefInterPro:IPR011257
DBxrefInterPro:IPR030841
DBxrefInterPro:IPR004036
DBxrefInterPro:IPR023170
DBxrefInterPro:IPR000445
DBxrefInterPro:IPR003265
DBxrefPFAM:PF00730
DBxrefPFAM:PF00633
Productalpha-trehalase nth1
Productalpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:92216..93475 +
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