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KJC3_006692-T1, KJC3_006692-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006692-T1
Unique NameKJC3_006692-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:110167..112003+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006692-T1 ID=KJC3_006692-T1|Name=KJC3_006692-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1837bp|location=Sequence derived from alignment at ch5:110167..112003+ (Aspergillus niger KJC3)
GTAAGTCCCAAGACATAGATATACAGCCCAAGCGTTGTGTTAGGAGAATG
GGTCAACTTGCGTACTAGGCATAGGACCAACAACCAACCGGAGAGACTGC
TATATGTTCACGCCTATCATTGGAAGACAACATGCCCCTATCCGAGTGGC
TGGTAAAACATAATTTCTCGCCATAGGTGGCTTACTGGTCTGCTGATCTC
GGTGGCACATCTTCCACGCAATCGCCTACGGGGACAGCAATATAGTTCTG
TATACTGGATCCGCTAGGAATCAGCTAATAATTTGACCAGCTCCATTCCA
GCAACCCACCCGCGCAAGCTCATGAGCATGATACACCGCAAAAGCAATGA
AATCACCCCGAGCACGATCTCGCTAAGCTCCGGATTGGAATGTGGGATTG
TTCTACCCAAAGCCAAACGTTCCTAGATCCTTCGATCGAAGCTGGCCCTA
AGACCTGTCGATTTTTTAGGAAGAATCATCCAACAAGCACCAAGGGTGGC
TCCAGCCCGAGTCATTGCGGTGGGAATTCAAAGAAGATCTTTGTCCTTCT
GGGTTGCTTCTCGACTTGATGGACCTCCGGTTGTGGACGGGCGAACCATG
GTTCTGGCGAATGGAAGTCTGGGGCCACCTTGGCCGTTGTGCTTTTTTTA
ACTTGCCCAAAGAATGGAACAGCGCCAGCTGGATTGTCCTGCTGTTTGCC
GGTTTGGGAATGACCTCGGTTTCGGCAATGGATGAGTCAGCACGATCAAC
AAGCGGTCCGGTTCCGGTCACCTGATCGGAGCTGGATAAGGCACGTGATC
ACATCAGAGCCTGCGGTCCGTAGAGCAGCTCCGGAGCTACGGTCGTCATC
ACGACCCAGGCCTCTTGTTATCAAACGCTACCCTTTTTGATTTACCTAGC
TTCAGACCCAATCACATCACAATGGAATCGTAAGCAGTTCCCCTTTTCAT
ACCTTTTTATCAAAAGTTCCCCGGATGTGTACTGACCAGTCCCAGCCTCA
ACGCCTCTGAGCAGCGTGAGCTCGCCTCTCGCATGGAGAGACGCCAGATG
AAGGAATTCATGACCGTACGTGAGACCCAAAATAAACAGTGATACCCTTT
CGCACCGAATCCGGCTCCTGCCTTGCACAATCTATCTACACTTTCAACAG
TTCATCTGTCCTTCCGTCCATCCGCCCGTCCATCTGCCCATTCGTCCATT
TATCATCCCTAGCTCGGCCTTCCGGATTCTAATCTGATCATTGTAGATGT
ACTCCAAGCTCGTCCAGCGCTGCTTCGATGACTGCGTCAACGACTTCACC
ACCAAGTCCCTGATCAACCGGGAAGAGGGCTGTGTCCTGCGCTGCGTTGA
CAAGTTCATGAAGGGATCGGCTCGCCTGAACGAGCGGTTCCAGGAACAGA
ACCAGGCCATGATGATGCAGGGACAACAGCGGTAAATGGGAAATTTAGCA
TGGGGTTCGGTTGCTTTGCTTTGCCTTGACTTTGGCGGTTTCTGTATAAA
ATATTAGAATTTTTGCAATGATGACATCCCCTAATGGCCGGCGATGGGCA
CCCGCTCGCTCTTGAGGAGCAAGTTTTGGTTGCCGAGCTCACAGTATGGA
GGTATACTGTTGCTGCCGTGATTGTAATATATGGAATGAAAATAGCATTT
GAAGTAAACTATGCTGGTTAGGATACAGATGGTCAGTTGTAGCATGTATC
AGGCATAATGGATATTTCATTTGCAGGCATAAATGTGGTATAACCATGAT
GAAGTCATCGACATTTGACTTTCTCCAATTTTGCTTCTTTCTTCTCCAAA
AGACGTGAGGGGATGAGTCCCTAAGAATACTTTTACA
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Coding sequence (CDS) from alignment at ch5:110167..112003+

>KJC3_006692-T1 ID=KJC3_006692-T1|Name=KJC3_006692-T1|organism=Aspergillus niger KJC3|type=CDS|length=801bp|location=Sequence derived from alignment at ch5:110167..112003+ (Aspergillus niger KJC3)
ATGGAATCCCTCAACGCCTCTGAGCAGCGTGAGCTCGCCTCTCGCATGGA
GAGACGCCAGATGAAGGAATTCATGACCATGTACTCCAAGCTCGTCCAGC
GCTGCTTCGATGACTGCGTCAACGACTTCACCACCAAGTCCCTGATCAAC
CGGGAAGAGGGCTGTGTCCTGCGCTGCGTTGACAAGTTCATGAAGGGATC
GGCTCGCCTGAACGAGCGGTTCCAGGAACAGAACCAGGCCATGATGATGC
AGGGACAACAGCGGTAAATGGAATCCCTCAACGCCTCTGAGCAGCGTGAG
CTCGCCTCTCGCATGGAGAGACGCCAGATGAAGGAATTCATGACCATGTA
CTCCAAGCTCGTCCAGCGCTGCTTCGATGACTGCGTCAACGACTTCACCA
CCAAGTCCCTGATCAACCGGGAAGAGGGCTGTGTCCTGCGCTGCGTTGAC
AAGTTCATGAAGGGATCGGCTCGCCTGAACGAGCGGTTCCAGGAACAGAA
CCAGGCCATGATGATGCAGGGACAACAGCGGTAAATGGAATCCCTCAACG
CCTCTGAGCAGCGTGAGCTCGCCTCTCGCATGGAGAGACGCCAGATGAAG
GAATTCATGACCATGTACTCCAAGCTCGTCCAGCGCTGCTTCGATGACTG
CGTCAACGACTTCACCACCAAGTCCCTGATCAACCGGGAAGAGGGCTGTG
TCCTGCGCTGCGTTGACAAGTTCATGAAGGGATCGGCTCGCCTGAACGAG
CGGTTCCAGGAACAGAACCAGGCCATGATGATGCAGGGACAACAGCGGTA
A
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM9KJC3_006692Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006692-T1KJC3_006692-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006692-T1.utr5p1KJC3_006692-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006692-T1.exon1KJC3_006692-T1.exon1Aspergillus niger KJC3exon
KJC3_006692-T1.exon2KJC3_006692-T1.exon2Aspergillus niger KJC3exon
KJC3_006692-T1.exon3KJC3_006692-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006692-T1.cdsKJC3_006692-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006692-T1.utr3p1KJC3_006692-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265L8N
DBxrefInterPro:IPR035427
DBxrefInterPro:IPR004217
DBxrefPFAM:PF02953
Productprotein transporter tim9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:110167..112003 +
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