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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:121115..124722+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006696-T3 ID=KJC3_006696-T3|Name=KJC3_006696-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3608bp|location=Sequence derived from alignment at ch5:121115..124722+ (Aspergillus niger KJC3) GCAGCCGGACCTTCTAGTGTTGTCAAGGAGAGAGACATGATGTGGTGCTA
AAAGCAACAACGCGTGTTGGCTGGACTGCCGCAGGGCCAATCAGGGGGAA
ACATTGCTGGAAGGGTTCGTGGATCGCCCCAAACTTCCAACTTCCCACGG
CGAACACACGAGGAAGTTCTCTCAGTCCCACCCAACTAGAATCGGGCTTT
TCTGCATCCCAGACGGGCTAACTATCCACCCACTGGACACTCACTACACT
GGCAACCAGGCTAGTCTAGTCTAATGGTTAGTGCTCTCTCCCCCCCCAGC
CAAGAGTTTACTACTATTAGTATTTTGGATGGGCCCTTCCCACACGCCCC
CCCAGTCAACAATGGTTGGTGCTTGTGCTTTCATCTCTCTCTCCTCTTTC
CAGCTCCGACATCCATGCGTCTCTAACCCAGCTCCTTCTGGCTCCATCCA
GATCGTCCTGTCGCGTCGTGTCGTGCCCTTGACATCTGGGGATGAGACTG
TTCCCCTCATGCGAGGAGTCCTGCACTGCATAGATTCACACGACCCTTGA
AGCACGCGCCCGGCGTGGCCTGGACGAGCCACTTCCCCCCCCCCTCACCC
CCCTCCGCCCGCTCATTCCAATGAGCCAGTGACTGGTGGATATCTGTTCG
CTATTGTAGACTTTCGCCGTTGCCCAGCATGGCATCCATCATGGAGGGGG
GCCTACTGCCCATGATCAAGTGCTCCAATTGTGGAATGAGCGTGGAAATC
TCCTCCATGGGCGATCATGTGTGTGCCAAACCAATGCCAGGTAAAGATTC
TCCCCCAATCTTTCTCTACCCCAGCTATGCTGTTCACCGTTGGAATGCAA
TGTGTTGACCGGTCCCTTGCAGCAACTCCTTCGCCCTCCCAATCCCCTCC
GCCGCCCCCGCCCAAATCAGACAATGGGTTACCGTCCAGAACTCCCAGCG
ATGCCTGGACCTCCAAGCCCGGAAGGTCCGGCCCTCCGCCTCGCATTGAC
CCTGCAATGGCCAGTATGTTTATTTTGGACACCACGCGAGCCTGCGCCAT
CCATATATTAGAGTTATGCGTCTCATGCAATTAACACCGACCTTCCAGAT
CGTCCTTTCTTGAACCCCGCAAGTCCGATAGCCAACCACGACCCGTTGGT
CCCTTCCCCTCTTTCGACGTCTTCAGGTCAACGGTCGCCGTTTAGAGCTC
TCCAGCGCAGCCAGACCTCTCCTTTGCCCGACGAACCGCAATCCCCGGAT
TCGATCAACCTGGAAACCGCATTTGCTACCTTCCCCCTACCCCGTTCCAT
GTCGGACAGACGCCCGGGTGGTATGCCGAGCGCAAAGGACCCCAGGTCAG
CACCTCCAATGCCATCAGCTCGATTAGCACCTGCGTTGGACCGAAATGCG
CTTTCAGACGATGTACCCCCGCCACCGCTCCCGAAAGATGACCCTCCTGC
GACGGCCATGGGCGTGGGCCATAAACATGGCGCTTCGATAGACAGCAAAA
GCAGCTACCGGACATCGCTGGCAAGCACGCGGTATGGAGACAATAGGAAT
TCCAAGCGGTCGACTGCCATGTCGAGCCGTCGGCCTTCGTTTGGGAGCGT
CGCGCGCGATCCGTACAAGTTTGTGGATGATGCTCCCCCGGTACCGTCTA
CTGCACCGCAGCAACTCCTGCGCCCCTCCAGGATTTCGGATTCCTCCGTC
GCCGAAGTCGCGGACAAGCGTGAAGGCAGGGGTGAAATATACAGTGGCTT
CGATTTCGGGGTGTCGGAACGGCCGACGAGTGCCAAGGCTGAGATTGACC
ATGTCAATGCAAGTGCGCTCCGAGTCTCATCGCATACCAATAGCAACTCC
GATCGTCTTAGCAGCAACCGTGGATCCGCAGAGTTGTTCTTCCAAAGCCC
GGCCCAGAGTTCCTATGGACCCCCGCTCGACTTTGAGCTACCAAATGAGC
CACTGGCTTCGCCTGCGACCCCGGCCAACGGGGAGTACAAGGCCTTCAAG
CCACAAAGCTCCGATTTCCTCCAGCCAGCAGACGCGGAATCCGGTCGCTC
GAATGAGCGAGATACCAATCAAAGGAAGGATTCTGATTCGGCTAGTGACG
GGAACAACTCTGTTTCCAACTTCGCACGAGCACTGGGACTAGAGGTCGAC
CACACTGCGAATAGTTCAATAACCTCGTCGGACTCCTCACCGTCAGACAC
CACCCGCAGTGGAACGTCTCTATCCAGTCTGCCATCGGAAGCCAGCATGT
CCCGACGGAAACCCTCAGATCAGGGTCGTCTGGGTCCTGTTGTGGAGGAA
GAGAAGAAGCCCCAGCAGCCTGTGCTGGACGAACCGGTCCTCGAAAGTCC
GACCGCCCTCGAGCCACCGCGGATTCCAGAAGCCTTATTCAGCCCTGACT
CGCCAACTGACCCTGCCATTAGTCAGGGTAGCCTGTCGCTTGTTTCTGAA
AAGAAACCCCGGCGTCCTGAGGGGGAGGAGGAGAACCCACCCCGACCAGG
GATGGTGCGTTCTGCGACAGCACCGCCGCCGCGACCCTCACCTCGGCCCA
AGGGCCCCTGTCGTGGTTGCGGTGAAATGATCATGGGCAAGTCCGTGTCG
TCGGCCGACGGCCGTCTGACGGGCCGATACCACCGCGCCTGTTTCGTGTG
CTTCCAGTGCCGGACTCCCTTCCAGACGGCCGACTTTTACGTCCTGGAAG
ATCGTCCCTATTGTGCCCAGCACTATCATGAACGAAATGGCTCCCTTTGC
CAGACCTGCCATACTGGCATTGAGGGCCAGTACCTAGAGACTGTTGAACG
CCGCGGCCGTGGGCCCGCGGATCGTCAGAAATTCCACCCGGACTGCCTGA
AATGCCGCACCTGCCAGATTCCTCTGAAGGGGGATTACTTTGAATGGTAT
GGTCAGGTATACTGCGAACGTGACGCACGACGGGCGGCAGCTGCTACGCC
ACCGCCTCGTCCTCGCCGTCCAACCATGCCCTCGTCTCCGTTAGCCCCGT
CCGGCCGTGGATATCCACCACCGCCCCCAGGGTACATGGGCCCTCCTGGC
CCGGGTCCTGGCTTTGGACCGGGTCGCGGACGGGGTCGTGGACTGCGACC
ACCCGGCCCGGTCGATGGGCCGTACGCAGCGACGGGACCCCTTCCTCCCG
CGCGACGTTTCCCGGAGCGCCGGACTACCAGGTTGATGATGATATGATAT
CCCTAATGGCTATTCTGATCTGGTTTTAAGCTGCGGACAGCTATATTTTC
CATTTGCCATTTACTCCAAGTTACTGGGCACCCCCCTTTTTATTTTCTGC
CCTTCACATTTCCTTTGCCATGACCTAGACCTTTCGCCATATACCCTTCT
TTTGCATCTCCAGAAATTGGTTCCTCATCGTTGATTTCTTTCTCCCCTGG
CTGGCGAGGTTTGAACTGGGGTCGCTTTCTCTTCTTGTCTGTTGGTGGTC
ATCAACAATTTATGTTTACCCTGCATAACGTCTGGTGTCATCTTGGTGTT
TCCAGGCTGGGTTCTTCTACGTGGTTGGGTGGCTGGATACCCTCCTCTTA
ACGGCATGTTATAGCGTTAATGTATGAATTGATTAATTTCACATTAGCAA
CATTCTTG back to topCoding sequence (CDS) from alignment at ch5:121115..124722+ >KJC3_006696-T3 ID=KJC3_006696-T3|Name=KJC3_006696-T3|organism=Aspergillus niger KJC3|type=CDS|length=6678bp|location=Sequence derived from alignment at ch5:121115..124722+ (Aspergillus niger KJC3) ATGTGTGTGCCAAACCAATGCCAGCAACTCCTTCGCCCTCCCAATCCCCT CCGCCGCCCCCGCCCAAATCAGACAATGGGTTACCGTCCAGAACTCCCAG CGATGCCTGGACCTCCAAGCCCGGAAGATCGTCCTTTCTTGAACCCCGCA AGTCCGATAGCCAACCACGACCCGTTGGTCCCTTCCCCTCTTTCGACGTC TTCAGGTCAACGGTCGCCGTTTAGAGCTCTCCAGCGCAGCCAGACCTCTC CTTTGCCCGACGAACCGCAATCCCCGGATTCGATCAACCTGGAAACCGCA TTTGCTACCTTCCCCCTACCCCGTTCCATGTCGGACAGACGCCCGGGTGG TATGCCGAGCGCAAAGGACCCCAGGTCAGCACCTCCAATGCCATCAGCTC GATTAGCACCTGCGTTGGACCGAAATGCGCTTTCAGACGATGTACCCCCG CCACCGCTCCCGAAAGATGACCCTCCTGCGACGGCCATGGGCGTGGGCCA TAAACATGGCGCTTCGATAGACAGCAAAAGCAGCTACCGGACATCGCTGG CAAGCACGCGGTATGGAGACAATAGGAATTCCAAGCGGTCGACTGCCATG TCGAGCCGTCGGCCTTCGTTTGGGAGCGTCGCGCGCGATCCGTACAAGTT TGTGGATGATGCTCCCCCGGTACCGTCTACTGCACCGCAGCAACTCCTGC GCCCCTCCAGGATTTCGGATTCCTCCGTCGCCGAAGTCGCGGACAAGCGT GAAGGCAGGGGTGAAATATACAGTGGCTTCGATTTCGGGGTGTCGGAACG GCCGACGAGTGCCAAGGCTGAGATTGACCATGTCAATGCAAGTGCGCTCC GAGTCTCATCGCATACCAATAGCAACTCCGATCGTCTTAGCAGCAACCGT GGATCCGCAGAGTTGTTCTTCCAAAGCCCGGCCCAGAGTTCCTATGGACC CCCGCTCGACTTTGAGCTACCAAATGAGCCACTGGCTTCGCCTGCGACCC CGGCCAACGGGGAGTACAAGGCCTTCAAGCCACAAAGCTCCGATTTCCTC CAGCCAGCAGACGCGGAATCCGGTCGCTCGAATGAGCGAGATACCAATCA AAGGAAGGATTCTGATTCGGCTAGTGACGGGAACAACTCTGTTTCCAACT TCGCACGAGCACTGGGACTAGAGGTCGACCACACTGCGAATAGTTCAATA ACCTCGTCGGACTCCTCACCGTCAGACACCACCCGCAGTGGAACGTCTCT ATCCAGTCTGCCATCGGAAGCCAGCATGTCCCGACGGAAACCCTCAGATC AGGGTCGTCTGGGTCCTGTTGTGGAGGAAGAGAAGAAGCCCCAGCAGCCT GTGCTGGACGAACCGGTCCTCGAAAGTCCGACCGCCCTCGAGCCACCGCG GATTCCAGAAGCCTTATTCAGCCCTGACTCGCCAACTGACCCTGCCATTA GTCAGGGTAGCCTGTCGCTTGTTTCTGAAAAGAAACCCCGGCGTCCTGAG GGGGAGGAGGAGAACCCACCCCGACCAGGGATGGTGCGTTCTGCGACAGC ACCGCCGCCGCGACCCTCACCTCGGCCCAAGGGCCCCTGTCGTGGTTGCG GTGAAATGATCATGGGCAAGTCCGTGTCGTCGGCCGACGGCCGTCTGACG GGCCGATACCACCGCGCCTGTTTCGTGTGCTTCCAGTGCCGGACTCCCTT CCAGACGGCCGACTTTTACGTCCTGGAAGATCGTCCCTATTGTGCCCAGC ACTATCATGAACGAAATGGCTCCCTTTGCCAGACCTGCCATACTGGCATT GAGGGCCAGTACCTAGAGACTGTTGAACGCCGCGGCCGTGGGCCCGCGGA TCGTCAGAAATTCCACCCGGACTGCCTGAAATGCCGCACCTGCCAGATTC CTCTGAAGGGGGATTACTTTGAATGGTATGGTCAGGTATACTGCGAACGT GACGCACGACGGGCGGCAGCTGCTACGCCACCGCCTCGTCCTCGCCGTCC AACCATGCCCTCGTCTCCGTTAGCCCCGTCCGGCCGTGGATATCCACCAC CGCCCCCAGGGTACATGGGCCCTCCTGGCCCGGGTCCTGGCTTTGGACCG GGTCGCGGACGGGGTCGTGGACTGCGACCACCCGGCCCGGTCGATGGGCC GTACGCAGCGACGGGACCCCTTCCTCCCGCGCGACGTTTCCCGGAGCGCC GGACTACCAGGTTGATGATGATATGAATGTGTGTGCCAAACCAATGCCAG CAACTCCTTCGCCCTCCCAATCCCCTCCGCCGCCCCCGCCCAAATCAGAC AATGGGTTACCGTCCAGAACTCCCAGCGATGCCTGGACCTCCAAGCCCGG AAGATCGTCCTTTCTTGAACCCCGCAAGTCCGATAGCCAACCACGACCCG TTGGTCCCTTCCCCTCTTTCGACGTCTTCAGGTCAACGGTCGCCGTTTAG AGCTCTCCAGCGCAGCCAGACCTCTCCTTTGCCCGACGAACCGCAATCCC CGGATTCGATCAACCTGGAAACCGCATTTGCTACCTTCCCCCTACCCCGT TCCATGTCGGACAGACGCCCGGGTGGTATGCCGAGCGCAAAGGACCCCAG GTCAGCACCTCCAATGCCATCAGCTCGATTAGCACCTGCGTTGGACCGAA ATGCGCTTTCAGACGATGTACCCCCGCCACCGCTCCCGAAAGATGACCCT CCTGCGACGGCCATGGGCGTGGGCCATAAACATGGCGCTTCGATAGACAG CAAAAGCAGCTACCGGACATCGCTGGCAAGCACGCGGTATGGAGACAATA GGAATTCCAAGCGGTCGACTGCCATGTCGAGCCGTCGGCCTTCGTTTGGG AGCGTCGCGCGCGATCCGTACAAGTTTGTGGATGATGCTCCCCCGGTACC GTCTACTGCACCGCAGCAACTCCTGCGCCCCTCCAGGATTTCGGATTCCT CCGTCGCCGAAGTCGCGGACAAGCGTGAAGGCAGGGGTGAAATATACAGT GGCTTCGATTTCGGGGTGTCGGAACGGCCGACGAGTGCCAAGGCTGAGAT TGACCATGTCAATGCAAGTGCGCTCCGAGTCTCATCGCATACCAATAGCA ACTCCGATCGTCTTAGCAGCAACCGTGGATCCGCAGAGTTGTTCTTCCAA AGCCCGGCCCAGAGTTCCTATGGACCCCCGCTCGACTTTGAGCTACCAAA TGAGCCACTGGCTTCGCCTGCGACCCCGGCCAACGGGGAGTACAAGGCCT TCAAGCCACAAAGCTCCGATTTCCTCCAGCCAGCAGACGCGGAATCCGGT CGCTCGAATGAGCGAGATACCAATCAAAGGAAGGATTCTGATTCGGCTAG TGACGGGAACAACTCTGTTTCCAACTTCGCACGAGCACTGGGACTAGAGG TCGACCACACTGCGAATAGTTCAATAACCTCGTCGGACTCCTCACCGTCA GACACCACCCGCAGTGGAACGTCTCTATCCAGTCTGCCATCGGAAGCCAG CATGTCCCGACGGAAACCCTCAGATCAGGGTCGTCTGGGTCCTGTTGTGG AGGAAGAGAAGAAGCCCCAGCAGCCTGTGCTGGACGAACCGGTCCTCGAA AGTCCGACCGCCCTCGAGCCACCGCGGATTCCAGAAGCCTTATTCAGCCC TGACTCGCCAACTGACCCTGCCATTAGTCAGGGTAGCCTGTCGCTTGTTT CTGAAAAGAAACCCCGGCGTCCTGAGGGGGAGGAGGAGAACCCACCCCGA CCAGGGATGGTGCGTTCTGCGACAGCACCGCCGCCGCGACCCTCACCTCG GCCCAAGGGCCCCTGTCGTGGTTGCGGTGAAATGATCATGGGCAAGTCCG TGTCGTCGGCCGACGGCCGTCTGACGGGCCGATACCACCGCGCCTGTTTC GTGTGCTTCCAGTGCCGGACTCCCTTCCAGACGGCCGACTTTTACGTCCT GGAAGATCGTCCCTATTGTGCCCAGCACTATCATGAACGAAATGGCTCCC TTTGCCAGACCTGCCATACTGGCATTGAGGGCCAGTACCTAGAGACTGTT GAACGCCGCGGCCGTGGGCCCGCGGATCGTCAGAAATTCCACCCGGACTG CCTGAAATGCCGCACCTGCCAGATTCCTCTGAAGGGGGATTACTTTGAAT GGTATGGTCAGGTATACTGCGAACGTGACGCACGACGGGCGGCAGCTGCT ACGCCACCGCCTCGTCCTCGCCGTCCAACCATGCCCTCGTCTCCGTTAGC CCCGTCCGGCCGTGGATATCCACCACCGCCCCCAGGGTACATGGGCCCTC CTGGCCCGGGTCCTGGCTTTGGACCGGGTCGCGGACGGGGTCGTGGACTG CGACCACCCGGCCCGGTCGATGGGCCGTACGCAGCGACGGGACCCCTTCC TCCCGCGCGACGTTTCCCGGAGCGCCGGACTACCAGGTTGATGATGATAT GAATGTGTGTGCCAAACCAATGCCAGCAACTCCTTCGCCCTCCCAATCCC CTCCGCCGCCCCCGCCCAAATCAGACAATGGGTTACCGTCCAGAACTCCC AGCGATGCCTGGACCTCCAAGCCCGGAAGATCGTCCTTTCTTGAACCCCG CAAGTCCGATAGCCAACCACGACCCGTTGGTCCCTTCCCCTCTTTCGACG TCTTCAGGTCAACGGTCGCCGTTTAGAGCTCTCCAGCGCAGCCAGACCTC TCCTTTGCCCGACGAACCGCAATCCCCGGATTCGATCAACCTGGAAACCG CATTTGCTACCTTCCCCCTACCCCGTTCCATGTCGGACAGACGCCCGGGT GGTATGCCGAGCGCAAAGGACCCCAGGTCAGCACCTCCAATGCCATCAGC TCGATTAGCACCTGCGTTGGACCGAAATGCGCTTTCAGACGATGTACCCC CGCCACCGCTCCCGAAAGATGACCCTCCTGCGACGGCCATGGGCGTGGGC CATAAACATGGCGCTTCGATAGACAGCAAAAGCAGCTACCGGACATCGCT GGCAAGCACGCGGTATGGAGACAATAGGAATTCCAAGCGGTCGACTGCCA TGTCGAGCCGTCGGCCTTCGTTTGGGAGCGTCGCGCGCGATCCGTACAAG TTTGTGGATGATGCTCCCCCGGTACCGTCTACTGCACCGCAGCAACTCCT GCGCCCCTCCAGGATTTCGGATTCCTCCGTCGCCGAAGTCGCGGACAAGC GTGAAGGCAGGGGTGAAATATACAGTGGCTTCGATTTCGGGGTGTCGGAA CGGCCGACGAGTGCCAAGGCTGAGATTGACCATGTCAATGCAAGTGCGCT CCGAGTCTCATCGCATACCAATAGCAACTCCGATCGTCTTAGCAGCAACC GTGGATCCGCAGAGTTGTTCTTCCAAAGCCCGGCCCAGAGTTCCTATGGA CCCCCGCTCGACTTTGAGCTACCAAATGAGCCACTGGCTTCGCCTGCGAC CCCGGCCAACGGGGAGTACAAGGCCTTCAAGCCACAAAGCTCCGATTTCC TCCAGCCAGCAGACGCGGAATCCGGTCGCTCGAATGAGCGAGATACCAAT CAAAGGAAGGATTCTGATTCGGCTAGTGACGGGAACAACTCTGTTTCCAA CTTCGCACGAGCACTGGGACTAGAGGTCGACCACACTGCGAATAGTTCAA TAACCTCGTCGGACTCCTCACCGTCAGACACCACCCGCAGTGGAACGTCT CTATCCAGTCTGCCATCGGAAGCCAGCATGTCCCGACGGAAACCCTCAGA TCAGGGTCGTCTGGGTCCTGTTGTGGAGGAAGAGAAGAAGCCCCAGCAGC CTGTGCTGGACGAACCGGTCCTCGAAAGTCCGACCGCCCTCGAGCCACCG CGGATTCCAGAAGCCTTATTCAGCCCTGACTCGCCAACTGACCCTGCCAT TAGTCAGGGTAGCCTGTCGCTTGTTTCTGAAAAGAAACCCCGGCGTCCTG AGGGGGAGGAGGAGAACCCACCCCGACCAGGGATGGTGCGTTCTGCGACA GCACCGCCGCCGCGACCCTCACCTCGGCCCAAGGGCCCCTGTCGTGGTTG CGGTGAAATGATCATGGGCAAGTCCGTGTCGTCGGCCGACGGCCGTCTGA CGGGCCGATACCACCGCGCCTGTTTCGTGTGCTTCCAGTGCCGGACTCCC TTCCAGACGGCCGACTTTTACGTCCTGGAAGATCGTCCCTATTGTGCCCA GCACTATCATGAACGAAATGGCTCCCTTTGCCAGACCTGCCATACTGGCA TTGAGGGCCAGTACCTAGAGACTGTTGAACGCCGCGGCCGTGGGCCCGCG GATCGTCAGAAATTCCACCCGGACTGCCTGAAATGCCGCACCTGCCAGAT TCCTCTGAAGGGGGATTACTTTGAATGGTATGGTCAGGTATACTGCGAAC GTGACGCACGACGGGCGGCAGCTGCTACGCCACCGCCTCGTCCTCGCCGT CCAACCATGCCCTCGTCTCCGTTAGCCCCGTCCGGCCGTGGATATCCACC ACCGCCCCCAGGGTACATGGGCCCTCCTGGCCCGGGTCCTGGCTTTGGAC CGGGTCGCGGACGGGGTCGTGGACTGCGACCACCCGGCCCGGTCGATGGG CCGTACGCAGCGACGGGACCCCTTCCTCCCGCGCGACGTTTCCCGGAGCG CCGGACTACCAGGTTGATGATGATATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006696-T3.utr5p1 | KJC3_006696-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006696-T3.utr3p1 | KJC3_006696-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR001781 |
DBxref | PFAM:PF00412 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch5 | supercontig | ch5:121115..124722 + |
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