You are here

Home

KJC3_006702-T1, KJC3_006702-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006702-T1
Unique NameKJC3_006702-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:137331..138720+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006702-T1 ID=KJC3_006702-T1|Name=KJC3_006702-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1390bp|location=Sequence derived from alignment at ch5:137331..138720+ (Aspergillus niger KJC3)
ATGAGTCCCTTTCCACCTCCTCCTACTCAGTCCCTAGGTGGGTAGCCTTC
TCGCAGCTGCAAGTACGTAATCTGACAAGTGGCCATTCTAGAATGGGAAA
AGCTCGGGATTGCGCCTAAGGATGGTCAGTAAATGTTCTTAGACAGGAGA
GCGAGTATTTTGACTGACAGCTTCTGCGTTTTTTAGTGAACGCTCATGTC
GAGTGTGAGTATTCGGTATCTACTGGCCATTGGTCAGAACCTCGACTGGT
TGAGGATCCTTTGCTACGCATTCATGGTCTCGCGCCAGGGCTCAATTATG
GTATGCGTGCGTGCCGATGGCCATAATTCAATAACTAACAACGCGATAGG
CCAACAAGCATTTGAAGGAATGAAAGGTATTGTGATATGATACCGACTGG
TGATAGTTCCGAGCAAAACATGGAACTGACTTTAAATCAGCCTATCGTGA
CCCTCAAGGCAACATTAATGTGTTTCGTCCCAAGGACCATGCAGCCCGGC
TGGCCTTGTCGTGTTCCGCAGTTGCTATTCCCACCATTCCAGAGGACCTC
TTCCTGCGTAGTGTCAATCTCGTCATTGCCAGCAATGCGGAGTATGTGCC
ACCGCACGATACAGACGCTGCCCTCTACATTCGACCTCTGGTGTTCGGAT
CGGATCCTTTCTTTGCAGTCTCCGCGGGGACGGGGTACAAGTTCTGCATT
TATGTCCAGCCCTACAGGGCCTACCATGGAAGTCAGCCTATACCAGCCCT
GATCCTGGAAGACTTGGACAGGGCTGCTCCCAAAGGCGTGGGCCATGTCA
AAGTCGGTGGAAATTATGGTCCCGTCCTGAAATGGAGTGATCAAGCCCGT
GCTGAGGGTTACTTCATTACTCTACATCTCGACAGCCGAACCAATTCTGA
AATTGACGAGTTCAGCACCTCCGGGTTTATCGGTCTGAAGAAAACCGGAG
ATTCCTTCACAGTGGTGGTACCCAGTAGTCGCTCAATCCTGAAAAGTGTG
ACCAGCACCACATGTCTGGATCTGGCCAGGTCCCTAGGTTGGAATGTTGA
GGTCCGCCCGGTATGACTCCACAATCGAATACATTCGGTTCCTTGCATTG
GGAATTGTGATTACATAGGCTGACCTCGAATGCAGATTCCATATCCCGAA
CTCCAATATTTCAGTGAGGTCATTGCGGTCGGCACTGCGGCAATGCTAGT
CTCCATCAAGTCGATCACCCGAAGGTCTACTGAGGAGACTTTTGCATATA
GCACTGACGGCTCAGGCGACGGTTGTAAGCAGTTGCAACAGGCTCTTCTG
GACATTCAGAAAGGAAGAGTCAAGTCCAATGAGGACTGGCTATGGCAGGT
TTCGCCTGTTGAGCAGCCAAGTGGTGATGAAAATGCATGA
back to top

Coding sequence (CDS) from alignment at ch5:137331..138720+

>KJC3_006702-T1 ID=KJC3_006702-T1|Name=KJC3_006702-T1|organism=Aspergillus niger KJC3|type=CDS|length=6516bp|location=Sequence derived from alignment at ch5:137331..138720+ (Aspergillus niger KJC3)
ATGAGTCCCTTTCCACCTCCTCCTACTCAGTCCCTAGAATGGGAAAAGCT
CGGGATTGCGCCTAAGGATGTGAACGCTCATGTCGAGTGTGAGTATTCGG
TATCTACTGGCCATTGGTCAGAACCTCGACTGGTTGAGGATCCTTTGCTA
CGCATTCATGGTCTCGCGCCAGGGCTCAATTATGGCCAACAAGCATTTGA
AGGAATGAAAGCCTATCGTGACCCTCAAGGCAACATTAATGTGTTTCGTC
CCAAGGACCATGCAGCCCGGCTGGCCTTGTCGTGTTCCGCAGTTGCTATT
CCCACCATTCCAGAGGACCTCTTCCTGCGTAGTGTCAATCTCGTCATTGC
CAGCAATGCGGAGTATGTGCCACCGCACGATACAGACGCTGCCCTCTACA
TTCGACCTCTGGTGTTCGGATCGGATCCTTTCTTTGCAGTCTCCGCGGGG
ACGGGGTACAAGTTCTGCATTTATGTCCAGCCCTACAGGGCCTACCATGG
AAGTCAGCCTATACCAGCCCTGATCCTGGAAGACTTGGACAGGGCTGCTC
CCAAAGGCGTGGGCCATGTCAAAGTCGGTGGAAATTATGGTCCCGTCCTG
AAATGGAGTGATCAAGCCCGTGCTGAGGGTTACTTCATTACTCTACATCT
CGACAGCCGAACCAATTCTGAAATTGACGAGTTCAGCACCTCCGGGTTTA
TCGGTCTGAAGAAAACCGGAGATTCCTTCACAGTGGTGGTACCCAGTAGT
CGCTCAATCCTGAAAAGTGTGACCAGCACCACATGTCTGGATCTGGCCAG
GTCCCTAGGTTGGAATGTTGAGGTCCGCCCGATTCCATATCCCGAACTCC
AATATTTCAGTGAGGTCATTGCGGTCGGCACTGCGGCAATGCTAGTCTCC
ATCAAGTCGATCACCCGAAGGTCTACTGAGGAGACTTTTGCATATAGCAC
TGACGGCTCAGGCGACGGTTGTAAGCAGTTGCAACAGGCTCTTCTGGACA
TTCAGAAAGGAAGAGTCAAGTCCAATGAGGACTGGCTATGGCAGGTTTCG
CCTGTTGAGCAGCCAAGTGGTGATGAAAATGCATGAATGAGTCCCTTTCC
ACCTCCTCCTACTCAGTCCCTAGAATGGGAAAAGCTCGGGATTGCGCCTA
AGGATGTGAACGCTCATGTCGAGTGTGAGTATTCGGTATCTACTGGCCAT
TGGTCAGAACCTCGACTGGTTGAGGATCCTTTGCTACGCATTCATGGTCT
CGCGCCAGGGCTCAATTATGGCCAACAAGCATTTGAAGGAATGAAAGCCT
ATCGTGACCCTCAAGGCAACATTAATGTGTTTCGTCCCAAGGACCATGCA
GCCCGGCTGGCCTTGTCGTGTTCCGCAGTTGCTATTCCCACCATTCCAGA
GGACCTCTTCCTGCGTAGTGTCAATCTCGTCATTGCCAGCAATGCGGAGT
ATGTGCCACCGCACGATACAGACGCTGCCCTCTACATTCGACCTCTGGTG
TTCGGATCGGATCCTTTCTTTGCAGTCTCCGCGGGGACGGGGTACAAGTT
CTGCATTTATGTCCAGCCCTACAGGGCCTACCATGGAAGTCAGCCTATAC
CAGCCCTGATCCTGGAAGACTTGGACAGGGCTGCTCCCAAAGGCGTGGGC
CATGTCAAAGTCGGTGGAAATTATGGTCCCGTCCTGAAATGGAGTGATCA
AGCCCGTGCTGAGGGTTACTTCATTACTCTACATCTCGACAGCCGAACCA
ATTCTGAAATTGACGAGTTCAGCACCTCCGGGTTTATCGGTCTGAAGAAA
ACCGGAGATTCCTTCACAGTGGTGGTACCCAGTAGTCGCTCAATCCTGAA
AAGTGTGACCAGCACCACATGTCTGGATCTGGCCAGGTCCCTAGGTTGGA
ATGTTGAGGTCCGCCCGATTCCATATCCCGAACTCCAATATTTCAGTGAG
GTCATTGCGGTCGGCACTGCGGCAATGCTAGTCTCCATCAAGTCGATCAC
CCGAAGGTCTACTGAGGAGACTTTTGCATATAGCACTGACGGCTCAGGCG
ACGGTTGTAAGCAGTTGCAACAGGCTCTTCTGGACATTCAGAAAGGAAGA
GTCAAGTCCAATGAGGACTGGCTATGGCAGGTTTCGCCTGTTGAGCAGCC
AAGTGGTGATGAAAATGCATGAATGAGTCCCTTTCCACCTCCTCCTACTC
AGTCCCTAGAATGGGAAAAGCTCGGGATTGCGCCTAAGGATGTGAACGCT
CATGTCGAGTGTGAGTATTCGGTATCTACTGGCCATTGGTCAGAACCTCG
ACTGGTTGAGGATCCTTTGCTACGCATTCATGGTCTCGCGCCAGGGCTCA
ATTATGGCCAACAAGCATTTGAAGGAATGAAAGCCTATCGTGACCCTCAA
GGCAACATTAATGTGTTTCGTCCCAAGGACCATGCAGCCCGGCTGGCCTT
GTCGTGTTCCGCAGTTGCTATTCCCACCATTCCAGAGGACCTCTTCCTGC
GTAGTGTCAATCTCGTCATTGCCAGCAATGCGGAGTATGTGCCACCGCAC
GATACAGACGCTGCCCTCTACATTCGACCTCTGGTGTTCGGATCGGATCC
TTTCTTTGCAGTCTCCGCGGGGACGGGGTACAAGTTCTGCATTTATGTCC
AGCCCTACAGGGCCTACCATGGAAGTCAGCCTATACCAGCCCTGATCCTG
GAAGACTTGGACAGGGCTGCTCCCAAAGGCGTGGGCCATGTCAAAGTCGG
TGGAAATTATGGTCCCGTCCTGAAATGGAGTGATCAAGCCCGTGCTGAGG
GTTACTTCATTACTCTACATCTCGACAGCCGAACCAATTCTGAAATTGAC
GAGTTCAGCACCTCCGGGTTTATCGGTCTGAAGAAAACCGGAGATTCCTT
CACAGTGGTGGTACCCAGTAGTCGCTCAATCCTGAAAAGTGTGACCAGCA
CCACATGTCTGGATCTGGCCAGGTCCCTAGGTTGGAATGTTGAGGTCCGC
CCGATTCCATATCCCGAACTCCAATATTTCAGTGAGGTCATTGCGGTCGG
CACTGCGGCAATGCTAGTCTCCATCAAGTCGATCACCCGAAGGTCTACTG
AGGAGACTTTTGCATATAGCACTGACGGCTCAGGCGACGGTTGTAAGCAG
TTGCAACAGGCTCTTCTGGACATTCAGAAAGGAAGAGTCAAGTCCAATGA
GGACTGGCTATGGCAGGTTTCGCCTGTTGAGCAGCCAAGTGGTGATGAAA
ATGCATGAATGAGTCCCTTTCCACCTCCTCCTACTCAGTCCCTAGAATGG
GAAAAGCTCGGGATTGCGCCTAAGGATGTGAACGCTCATGTCGAGTGTGA
GTATTCGGTATCTACTGGCCATTGGTCAGAACCTCGACTGGTTGAGGATC
CTTTGCTACGCATTCATGGTCTCGCGCCAGGGCTCAATTATGGCCAACAA
GCATTTGAAGGAATGAAAGCCTATCGTGACCCTCAAGGCAACATTAATGT
GTTTCGTCCCAAGGACCATGCAGCCCGGCTGGCCTTGTCGTGTTCCGCAG
TTGCTATTCCCACCATTCCAGAGGACCTCTTCCTGCGTAGTGTCAATCTC
GTCATTGCCAGCAATGCGGAGTATGTGCCACCGCACGATACAGACGCTGC
CCTCTACATTCGACCTCTGGTGTTCGGATCGGATCCTTTCTTTGCAGTCT
CCGCGGGGACGGGGTACAAGTTCTGCATTTATGTCCAGCCCTACAGGGCC
TACCATGGAAGTCAGCCTATACCAGCCCTGATCCTGGAAGACTTGGACAG
GGCTGCTCCCAAAGGCGTGGGCCATGTCAAAGTCGGTGGAAATTATGGTC
CCGTCCTGAAATGGAGTGATCAAGCCCGTGCTGAGGGTTACTTCATTACT
CTACATCTCGACAGCCGAACCAATTCTGAAATTGACGAGTTCAGCACCTC
CGGGTTTATCGGTCTGAAGAAAACCGGAGATTCCTTCACAGTGGTGGTAC
CCAGTAGTCGCTCAATCCTGAAAAGTGTGACCAGCACCACATGTCTGGAT
CTGGCCAGGTCCCTAGGTTGGAATGTTGAGGTCCGCCCGATTCCATATCC
CGAACTCCAATATTTCAGTGAGGTCATTGCGGTCGGCACTGCGGCAATGC
TAGTCTCCATCAAGTCGATCACCCGAAGGTCTACTGAGGAGACTTTTGCA
TATAGCACTGACGGCTCAGGCGACGGTTGTAAGCAGTTGCAACAGGCTCT
TCTGGACATTCAGAAAGGAAGAGTCAAGTCCAATGAGGACTGGCTATGGC
AGGTTTCGCCTGTTGAGCAGCCAAGTGGTGATGAAAATGCATGAATGAGT
CCCTTTCCACCTCCTCCTACTCAGTCCCTAGAATGGGAAAAGCTCGGGAT
TGCGCCTAAGGATGTGAACGCTCATGTCGAGTGTGAGTATTCGGTATCTA
CTGGCCATTGGTCAGAACCTCGACTGGTTGAGGATCCTTTGCTACGCATT
CATGGTCTCGCGCCAGGGCTCAATTATGGCCAACAAGCATTTGAAGGAAT
GAAAGCCTATCGTGACCCTCAAGGCAACATTAATGTGTTTCGTCCCAAGG
ACCATGCAGCCCGGCTGGCCTTGTCGTGTTCCGCAGTTGCTATTCCCACC
ATTCCAGAGGACCTCTTCCTGCGTAGTGTCAATCTCGTCATTGCCAGCAA
TGCGGAGTATGTGCCACCGCACGATACAGACGCTGCCCTCTACATTCGAC
CTCTGGTGTTCGGATCGGATCCTTTCTTTGCAGTCTCCGCGGGGACGGGG
TACAAGTTCTGCATTTATGTCCAGCCCTACAGGGCCTACCATGGAAGTCA
GCCTATACCAGCCCTGATCCTGGAAGACTTGGACAGGGCTGCTCCCAAAG
GCGTGGGCCATGTCAAAGTCGGTGGAAATTATGGTCCCGTCCTGAAATGG
AGTGATCAAGCCCGTGCTGAGGGTTACTTCATTACTCTACATCTCGACAG
CCGAACCAATTCTGAAATTGACGAGTTCAGCACCTCCGGGTTTATCGGTC
TGAAGAAAACCGGAGATTCCTTCACAGTGGTGGTACCCAGTAGTCGCTCA
ATCCTGAAAAGTGTGACCAGCACCACATGTCTGGATCTGGCCAGGTCCCT
AGGTTGGAATGTTGAGGTCCGCCCGATTCCATATCCCGAACTCCAATATT
TCAGTGAGGTCATTGCGGTCGGCACTGCGGCAATGCTAGTCTCCATCAAG
TCGATCACCCGAAGGTCTACTGAGGAGACTTTTGCATATAGCACTGACGG
CTCAGGCGACGGTTGTAAGCAGTTGCAACAGGCTCTTCTGGACATTCAGA
AAGGAAGAGTCAAGTCCAATGAGGACTGGCTATGGCAGGTTTCGCCTGTT
GAGCAGCCAAGTGGTGATGAAAATGCATGAATGAGTCCCTTTCCACCTCC
TCCTACTCAGTCCCTAGAATGGGAAAAGCTCGGGATTGCGCCTAAGGATG
TGAACGCTCATGTCGAGTGTGAGTATTCGGTATCTACTGGCCATTGGTCA
GAACCTCGACTGGTTGAGGATCCTTTGCTACGCATTCATGGTCTCGCGCC
AGGGCTCAATTATGGCCAACAAGCATTTGAAGGAATGAAAGCCTATCGTG
ACCCTCAAGGCAACATTAATGTGTTTCGTCCCAAGGACCATGCAGCCCGG
CTGGCCTTGTCGTGTTCCGCAGTTGCTATTCCCACCATTCCAGAGGACCT
CTTCCTGCGTAGTGTCAATCTCGTCATTGCCAGCAATGCGGAGTATGTGC
CACCGCACGATACAGACGCTGCCCTCTACATTCGACCTCTGGTGTTCGGA
TCGGATCCTTTCTTTGCAGTCTCCGCGGGGACGGGGTACAAGTTCTGCAT
TTATGTCCAGCCCTACAGGGCCTACCATGGAAGTCAGCCTATACCAGCCC
TGATCCTGGAAGACTTGGACAGGGCTGCTCCCAAAGGCGTGGGCCATGTC
AAAGTCGGTGGAAATTATGGTCCCGTCCTGAAATGGAGTGATCAAGCCCG
TGCTGAGGGTTACTTCATTACTCTACATCTCGACAGCCGAACCAATTCTG
AAATTGACGAGTTCAGCACCTCCGGGTTTATCGGTCTGAAGAAAACCGGA
GATTCCTTCACAGTGGTGGTACCCAGTAGTCGCTCAATCCTGAAAAGTGT
GACCAGCACCACATGTCTGGATCTGGCCAGGTCCCTAGGTTGGAATGTTG
AGGTCCGCCCGATTCCATATCCCGAACTCCAATATTTCAGTGAGGTCATT
GCGGTCGGCACTGCGGCAATGCTAGTCTCCATCAAGTCGATCACCCGAAG
GTCTACTGAGGAGACTTTTGCATATAGCACTGACGGCTCAGGCGACGGTT
GTAAGCAGTTGCAACAGGCTCTTCTGGACATTCAGAAAGGAAGAGTCAAG
TCCAATGAGGACTGGCTATGGCAGGTTTCGCCTGTTGAGCAGCCAAGTGG
TGATGAAAATGCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009081branched-chain amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004084branched-chain-amino-acid transaminase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006702KJC3_006702Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006702-T1KJC3_006702-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006702-T1.exon1KJC3_006702-T1.exon1Aspergillus niger KJC3exon
KJC3_006702-T1.exon2KJC3_006702-T1.exon2Aspergillus niger KJC3exon
KJC3_006702-T1.exon3KJC3_006702-T1.exon3Aspergillus niger KJC3exon
KJC3_006702-T1.exon4KJC3_006702-T1.exon4Aspergillus niger KJC3exon
KJC3_006702-T1.exon5KJC3_006702-T1.exon5Aspergillus niger KJC3exon
KJC3_006702-T1.exon6KJC3_006702-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006702-T1.cdsKJC3_006702-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR036038
DBxrefInterPro:IPR033939
DBxrefInterPro:IPR043131
DBxrefInterPro:IPR001544
DBxrefInterPro:IPR005786
DBxrefInterPro:IPR043132
DBxrefPFAM:PF01063
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:137331..138720 +
Powered by Drupal