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KJC3_006706-T1, KJC3_006706-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006706-T1
Unique NameKJC3_006706-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:156863..158289-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006706-T1 ID=KJC3_006706-T1|Name=KJC3_006706-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1427bp|location=Sequence derived from alignment at ch5:156863..158289- (Aspergillus niger KJC3)
GATGAATAACAGTGGTGTGGGTTTATCTGACCCAACATTCCGATACTACA
CTACTGGTCAAGCAACCCGGTATGCTGAAAATCGTCTGGGTTATCCAGCT
GAGCTATATGATTTGGTTCTCCGATATCATGCAGAGTCTAATGGTAATTT
CAAAACTCTCCTGGATGTTGGATGTGGCCCAGGAAATGCAACCCGTGACT
TGGCTCCCCATTTTGAATGCGCGGTGGGGATTGATCCTGGGCTCGAGATG
ATCCAAACTGCGCAACGTCTAGGCGGTGTTACCAAATCAAATAGCCCCAT
CGAGTTCCAAGTCTCGACTGCGGAGGATTGTGCTAAAATAGATAACGTTC
ATAACGGTGTGGATTTATTGGTTTCGGCAATGGCAGTAAGTCCAACCTGC
TCCATCATCCCGCCCGAGGACTGGTGTAGAGAGCTGAAACGACATCTCTT
CAAAACTAAAGGCACATTGGTTTTCGATGGAGGATTTCTGGAAATCTGCT
GCAAAGATTGTGAATCCAGGAGGCACTGTAGCTCTCTGGACATGCGCTTC
GTTGTACTGCCGTAAGTATTGTTCGACTTCCTTTTTCAGTCCATGCTAAC
AAGCTCACCTTACAGACCCATCAACACCTCACGCGGCTGAAGTGCAAAAC
GCACTTTTCCATCTCGAACGAGATATATTGAAACCCTATGAACTGCCTCC
AAATCGGCTCTCTAGTGATCTGTACGATAATTTGGTTCTTCCGTGGCATT
TGGATCCTCCTGTTACAGCATTCCCAATGAGTGAATATCGGCGTCTTGAA
TGGGACCGCGGTGGGATACTATCCGATGGAAAAGACTTTTTCATTCGTGC
AAAAGAATCATCACTGGAAGGATTAGGAGCTAGCTTAGGCACTGCAAGTA
TGGTCACAAGATGGAGAGCAGCTCATCCAGAGGAGGCGGGCACAGCTAAG
GACTGCGTGAATCTTACTCTCGCTGAGATTAAGAAAGCTTTGGGAGATAA
CTGGTGTGGAGAACTCAAACTGGGGCATTCAACTGTCATTCTCCTCTTTA
AAAGGAGGTACATCTGTCTAGACCTGGTGGAACATGCCGTCGCTTCATAG
ACCCAAAAGTATTATGGTCTTTCTTGTCGGTGGCTAATTATAGAGATCTG
CCTGACCTATTTTGACAGTCAAGATCGCGCAAAAATGCCTTCTATCAATC
CTAACGCACACATCTAAATCATGACTCATATGTTATGCACATGATACAAA
GTTGCCTTTGATGCCTTCGCACCCACACGGAATCTTCAAGGGATCGCAGT
TTCGCTGCCGAATGGCCGCGTGGAGAAAGCGACCACACGAGATTGGGAGG
ATACTCCGGAACCATCACAAAATCCAGACAAAGTAGTCGGCGACTACGGT
TTTTCTATATCCCACAGACAGTCTGAC
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Coding sequence (CDS) from alignment at ch5:156863..158289-

>KJC3_006706-T1 ID=KJC3_006706-T1|Name=KJC3_006706-T1|organism=Aspergillus niger KJC3|type=CDS|length=2907bp|location=Sequence derived from alignment at ch5:156863..158289- (Aspergillus niger KJC3)
ACCCATCAACACCTCACGCGGCTGAAGTGCAAAACGCACTTTTCCATCTC
GAACGAGATATATTGAAACCCTATGAACTGCCTCCAAATCGGCTCTCTAG
TGATCTGTACGATAATTTGGTTCTTCCGTGGCATTTGGATCCTCCTGTTA
CAGCATTCCCAATGAGTGAATATCGGCGTCTTGAATGGGACCGCGGTGGG
ATACTATCCGATGGAAAAGACTTTTTCATTCGTGCAAAAGAATCATCACT
GGAAGGATTAGGAGCTAGCTTAGGCACTGCAAGTATGGTCACAAGATGGA
GAGCAGCTCATCCAGAGGAGGCGGGCACAGCTAAGGACTGCGTGAATCTT
ACTCTCGCTGAGATTAAGAAAGCTTTGGGAGATAACTGGTGTGGAGAACT
CAAACTGGGGCATTCAACTGTCATTCTCCTCTTTAAAAGGAGGTACATCT
GTCTAGACCTGGTGGAACATGCCGTCGCTTCATAGGCACATTGGTTTTCG
ATGGAGGATTTCTGGAAATCTGCTGCAAAGATTGTGAATCCAGGAGGCAC
TGTAGCTCTCTGGACATGCGCTTCGTTGTACTGCCATGAATAACAGTGGT
GTGGGTTTATCTGACCCAACATTCCGATACTACACTACTGGTCAAGCAAC
CCGGTATGCTGAAAATCGTCTGGGTTATCCAGCTGAGCTATATGATTTGG
TTCTCCGATATCATGCAGAGTCTAATGGTAATTTCAAAACTCTCCTGGAT
GTTGGATGTGGCCCAGGAAATGCAACCCGTGACTTGGCTCCCCATTTTGA
ATGCGCGGTGGGGATTGATCCTGGGCTCGAGATGATCCAAACTGCGCAAC
GTCTAGGCGGTGTTACCAAATCAAATAGCCCCATCGAGTTCCAAGTCTCG
ACTGCGGAGGATTGTGCTAAAATAGATAACGTTCATAACGGTGTGGATTT
ATTGGTTTCGGCAATGGCAACCCATCAACACCTCACGCGGCTGAAGTGCA
AAACGCACTTTTCCATCTCGAACGAGATATATTGAAACCCTATGAACTGC
CTCCAAATCGGCTCTCTAGTGATCTGTACGATAATTTGGTTCTTCCGTGG
CATTTGGATCCTCCTGTTACAGCATTCCCAATGAGTGAATATCGGCGTCT
TGAATGGGACCGCGGTGGGATACTATCCGATGGAAAAGACTTTTTCATTC
GTGCAAAAGAATCATCACTGGAAGGATTAGGAGCTAGCTTAGGCACTGCA
AGTATGGTCACAAGATGGAGAGCAGCTCATCCAGAGGAGGCGGGCACAGC
TAAGGACTGCGTGAATCTTACTCTCGCTGAGATTAAGAAAGCTTTGGGAG
ATAACTGGTGTGGAGAACTCAAACTGGGGCATTCAACTGTCATTCTCCTC
TTTAAAAGGAGGTACATCTGTCTAGACCTGGTGGAACATGCCGTCGCTTC
ATAGGCACATTGGTTTTCGATGGAGGATTTCTGGAAATCTGCTGCAAAGA
TTGTGAATCCAGGAGGCACTGTAGCTCTCTGGACATGCGCTTCGTTGTAC
TGCCATGAATAACAGTGGTGTGGGTTTATCTGACCCAACATTCCGATACT
ACACTACTGGTCAAGCAACCCGGTATGCTGAAAATCGTCTGGGTTATCCA
GCTGAGCTATATGATTTGGTTCTCCGATATCATGCAGAGTCTAATGGTAA
TTTCAAAACTCTCCTGGATGTTGGATGTGGCCCAGGAAATGCAACCCGTG
ACTTGGCTCCCCATTTTGAATGCGCGGTGGGGATTGATCCTGGGCTCGAG
ATGATCCAAACTGCGCAACGTCTAGGCGGTGTTACCAAATCAAATAGCCC
CATCGAGTTCCAAGTCTCGACTGCGGAGGATTGTGCTAAAATAGATAACG
TTCATAACGGTGTGGATTTATTGGTTTCGGCAATGGCAACCCATCAACAC
CTCACGCGGCTGAAGTGCAAAACGCACTTTTCCATCTCGAACGAGATATA
TTGAAACCCTATGAACTGCCTCCAAATCGGCTCTCTAGTGATCTGTACGA
TAATTTGGTTCTTCCGTGGCATTTGGATCCTCCTGTTACAGCATTCCCAA
TGAGTGAATATCGGCGTCTTGAATGGGACCGCGGTGGGATACTATCCGAT
GGAAAAGACTTTTTCATTCGTGCAAAAGAATCATCACTGGAAGGATTAGG
AGCTAGCTTAGGCACTGCAAGTATGGTCACAAGATGGAGAGCAGCTCATC
CAGAGGAGGCGGGCACAGCTAAGGACTGCGTGAATCTTACTCTCGCTGAG
ATTAAGAAAGCTTTGGGAGATAACTGGTGTGGAGAACTCAAACTGGGGCA
TTCAACTGTCATTCTCCTCTTTAAAAGGAGGTACATCTGTCTAGACCTGG
TGGAACATGCCGTCGCTTCATAGGCACATTGGTTTTCGATGGAGGATTTC
TGGAAATCTGCTGCAAAGATTGTGAATCCAGGAGGCACTGTAGCTCTCTG
GACATGCGCTTCGTTGTACTGCCATGAATAACAGTGGTGTGGGTTTATCT
GACCCAACATTCCGATACTACACTACTGGTCAAGCAACCCGGTATGCTGA
AAATCGTCTGGGTTATCCAGCTGAGCTATATGATTTGGTTCTCCGATATC
ATGCAGAGTCTAATGGTAATTTCAAAACTCTCCTGGATGTTGGATGTGGC
CCAGGAAATGCAACCCGTGACTTGGCTCCCCATTTTGAATGCGCGGTGGG
GATTGATCCTGGGCTCGAGATGATCCAAACTGCGCAACGTCTAGGCGGTG
TTACCAAATCAAATAGCCCCATCGAGTTCCAAGTCTCGACTGCGGAGGAT
TGTGCTAAAATAGATAACGTTCATAACGGTGTGGATTTATTGGTTTCGGC
AATGGCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006706KJC3_006706Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006706-T1KJC3_006706-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006706-T1.cdsKJC3_006706-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006706-T1.utr3p1KJC3_006706-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006706-T1.exon3KJC3_006706-T1.exon3Aspergillus niger KJC3exon
KJC3_006706-T1.exon2KJC3_006706-T1.exon2Aspergillus niger KJC3exon
KJC3_006706-T1.exon1KJC3_006706-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006706-T1.utr5p1KJC3_006706-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR041698
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:156863..158289 -
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