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KJC3_006707-T1, KJC3_006707-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006707-T1
Unique NameKJC3_006707-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:160308..161443+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006707-T1 ID=KJC3_006707-T1|Name=KJC3_006707-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1136bp|location=Sequence derived from alignment at ch5:160308..161443+ (Aspergillus niger KJC3)
CGCCAGCCTGGTGTCAAGGACAGTGATAGAAACAAGATGGTATCCGAATT
CTGGTCAGCACCCCAAAATATGTCTCGTGTGTCTATTTAAATACGACAGT
GGCTAACGCCGCTAATCTTCAGTCCGAGCTATGGAGTGAGTTCTTCGTAA
TTGTAGCTGAAGCAACCAAAGATGGACATTAACCTGCCAAGCCATTCTTC
GGAGTCCTAGGATGTACGAGCGCCATTGTATTCACGAGCTTTGGGGCAGC
CTACGGGACTGCAAAGGCTGGGGTGGGCGTTTGTTCGTCCGGTGTCTTGC
GGCCGGACTTGATCGTCAAAAGTACTGTTCCATATCCATAGTAGTACCCT
GCGGCTAGCGATCAATGAGCTGACAAGTCAAAGACATTGTGCCCATTGTT
ATGGCCGGCATCCTGGGCATCTACGGCCTGGTGGTCTCCGTGTTGATTGC
CAACAACCTCGCGCAGGAGATGACTCTGTATACGAGTCTGCTCCAGCTGG
GCGCCGGCCTGGCGGTTGGGCTTTGCGGGCTGGCTGCTGGGTGAGTGAAG
CTTATCTTAGAATGTCTGTCGGAATTAGCTGTTGGCAACTGGCTGATTGA
TTTCAGGTTCGCGATTGGGATTGTCGGCGATGCAGGAGTGCGAGGAACCG
CGCAGCAGTCGAGACTTTATGTGGGAATGATCCTTATTTTGATCTTTGCT
GAGGTCTTGGGTATGTAGCTTGAACGACCATTTGTCCGAGAAACGGGGTA
AATGCTAACATAGCTGGTATGGTAGGATTGTACGGCTTGATCGTCGCGCT
TCTAATGAATTCCAGGGCAAGCGTTATTGACTTTAAATGCAGTAGCTGAT
TGAACAATTTTCAGTGCAGCATATTGGGTCTGCGAGAGTTTTCTTGTACC
CCGGCATGTTCATGCTGCAGCAGATCAAAGTCCCAGGTATTTCAGTCTAC
GGTAGTCGGCATCGCTCCAGTCCAGCGTGGTCTCCGTGTAGAAGAGGTTC
GGGTGGTTTCTCGTGATGGAGGAAGAATAAATTGGATCTTGTACAAGCTG
GATGCACCCATAATGACAGATCTAGAATTGGTCGTGCATGAGATTTTGAC
CGGATGTGGCCATCACGTGCCATTGTATGCATCCAG
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Coding sequence (CDS) from alignment at ch5:160308..161443+

>KJC3_006707-T1 ID=KJC3_006707-T1|Name=KJC3_006707-T1|organism=Aspergillus niger KJC3|type=CDS|length=2970bp|location=Sequence derived from alignment at ch5:160308..161443+ (Aspergillus niger KJC3)
ATGGTATCCGAATTCTGTCCGAGCTATGGACCATTCTTCGGAGTCCTAGG
ATGTACGAGCGCCATTGTATTCACGAGCTTTGGGGCAGCCTACGGGACTG
CAAAGGCTGGGGTGGGCGTTTGTTCGTCCGGTGTCTTGCGGCCGGACTTG
ATCGTCAAAAACATTGTGCCCATTGTTATGGCCGGCATCCTGGGCATCTA
CGGCCTGGTGGTCTCCGTGTTGATTGCCAACAACCTCGCGCAGGAGATGA
CTCTGTATACGAGTCTGCTCCAGCTGGGCGCCGGCCTGGCGGTTGGGCTT
TGCGGGCTGGCTGCTGGGTTCGCGATTGGGATTGTCGGCGATGCAGGAGT
GCGAGGAACCGCGCAGCAGTCGAGACTTTATGTGGGAATGATCCTTATTT
TGATCTTTGCTGAGGTCTTGGGATTGTACGGCTTGATCGTCGCGCTTCTA
ATGAATTCCAGGGCAAGCGTTATTGACTTTAAATGCAGTAGCTGAATGGT
ATCCGAATTCTGTCCGAGCTATGGACCATTCTTCGGAGTCCTAGGATGTA
CGAGCGCCATTGTATTCACGAGCTTTGGGGCAGCCTACGGGACTGCAAAG
GCTGGGGTGGGCGTTTGTTCGTCCGGTGTCTTGCGGCCGGACTTGATCGT
CAAAAACATTGTGCCCATTGTTATGGCCGGCATCCTGGGCATCTACGGCC
TGGTGGTCTCCGTGTTGATTGCCAACAACCTCGCGCAGGAGATGACTCTG
TATACGAGTCTGCTCCAGCTGGGCGCCGGCCTGGCGGTTGGGCTTTGCGG
GCTGGCTGCTGGGTTCGCGATTGGGATTGTCGGCGATGCAGGAGTGCGAG
GAACCGCGCAGCAGTCGAGACTTTATGTGGGAATGATCCTTATTTTGATC
TTTGCTGAGGTCTTGGGATTGTACGGCTTGATCGTCGCGCTTCTAATGAA
TTCCAGGGCAAGCGTTATTGACTTTAAATGCAGTAGCTGAATGGTATCCG
AATTCTGTCCGAGCTATGGACCATTCTTCGGAGTCCTAGGATGTACGAGC
GCCATTGTATTCACGAGCTTTGGGGCAGCCTACGGGACTGCAAAGGCTGG
GGTGGGCGTTTGTTCGTCCGGTGTCTTGCGGCCGGACTTGATCGTCAAAA
ACATTGTGCCCATTGTTATGGCCGGCATCCTGGGCATCTACGGCCTGGTG
GTCTCCGTGTTGATTGCCAACAACCTCGCGCAGGAGATGACTCTGTATAC
GAGTCTGCTCCAGCTGGGCGCCGGCCTGGCGGTTGGGCTTTGCGGGCTGG
CTGCTGGGTTCGCGATTGGGATTGTCGGCGATGCAGGAGTGCGAGGAACC
GCGCAGCAGTCGAGACTTTATGTGGGAATGATCCTTATTTTGATCTTTGC
TGAGGTCTTGGGATTGTACGGCTTGATCGTCGCGCTTCTAATGAATTCCA
GGGCAAGCGTTATTGACTTTAAATGCAGTAGCTGAATGGTATCCGAATTC
TGTCCGAGCTATGGACCATTCTTCGGAGTCCTAGGATGTACGAGCGCCAT
TGTATTCACGAGCTTTGGGGCAGCCTACGGGACTGCAAAGGCTGGGGTGG
GCGTTTGTTCGTCCGGTGTCTTGCGGCCGGACTTGATCGTCAAAAACATT
GTGCCCATTGTTATGGCCGGCATCCTGGGCATCTACGGCCTGGTGGTCTC
CGTGTTGATTGCCAACAACCTCGCGCAGGAGATGACTCTGTATACGAGTC
TGCTCCAGCTGGGCGCCGGCCTGGCGGTTGGGCTTTGCGGGCTGGCTGCT
GGGTTCGCGATTGGGATTGTCGGCGATGCAGGAGTGCGAGGAACCGCGCA
GCAGTCGAGACTTTATGTGGGAATGATCCTTATTTTGATCTTTGCTGAGG
TCTTGGGATTGTACGGCTTGATCGTCGCGCTTCTAATGAATTCCAGGGCA
AGCGTTATTGACTTTAAATGCAGTAGCTGAATGGTATCCGAATTCTGTCC
GAGCTATGGACCATTCTTCGGAGTCCTAGGATGTACGAGCGCCATTGTAT
TCACGAGCTTTGGGGCAGCCTACGGGACTGCAAAGGCTGGGGTGGGCGTT
TGTTCGTCCGGTGTCTTGCGGCCGGACTTGATCGTCAAAAACATTGTGCC
CATTGTTATGGCCGGCATCCTGGGCATCTACGGCCTGGTGGTCTCCGTGT
TGATTGCCAACAACCTCGCGCAGGAGATGACTCTGTATACGAGTCTGCTC
CAGCTGGGCGCCGGCCTGGCGGTTGGGCTTTGCGGGCTGGCTGCTGGGTT
CGCGATTGGGATTGTCGGCGATGCAGGAGTGCGAGGAACCGCGCAGCAGT
CGAGACTTTATGTGGGAATGATCCTTATTTTGATCTTTGCTGAGGTCTTG
GGATTGTACGGCTTGATCGTCGCGCTTCTAATGAATTCCAGGGCAAGCGT
TATTGACTTTAAATGCAGTAGCTGAATGGTATCCGAATTCTGTCCGAGCT
ATGGACCATTCTTCGGAGTCCTAGGATGTACGAGCGCCATTGTATTCACG
AGCTTTGGGGCAGCCTACGGGACTGCAAAGGCTGGGGTGGGCGTTTGTTC
GTCCGGTGTCTTGCGGCCGGACTTGATCGTCAAAAACATTGTGCCCATTG
TTATGGCCGGCATCCTGGGCATCTACGGCCTGGTGGTCTCCGTGTTGATT
GCCAACAACCTCGCGCAGGAGATGACTCTGTATACGAGTCTGCTCCAGCT
GGGCGCCGGCCTGGCGGTTGGGCTTTGCGGGCTGGCTGCTGGGTTCGCGA
TTGGGATTGTCGGCGATGCAGGAGTGCGAGGAACCGCGCAGCAGTCGAGA
CTTTATGTGGGAATGATCCTTATTTTGATCTTTGCTGAGGTCTTGGGATT
GTACGGCTTGATCGTCGCGCTTCTAATGAATTCCAGGGCAAGCGTTATTG
ACTTTAAATGCAGTAGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA3_2KJC3_006707Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006707-T1KJC3_006707-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006707-T1.utr5p1KJC3_006707-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006707-T1.exon1KJC3_006707-T1.exon1Aspergillus niger KJC3exon
KJC3_006707-T1.exon2KJC3_006707-T1.exon2Aspergillus niger KJC3exon
KJC3_006707-T1.exon3KJC3_006707-T1.exon3Aspergillus niger KJC3exon
KJC3_006707-T1.exon4KJC3_006707-T1.exon4Aspergillus niger KJC3exon
KJC3_006707-T1.exon5KJC3_006707-T1.exon5Aspergillus niger KJC3exon
KJC3_006707-T1.exon6KJC3_006707-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006707-T1.cdsKJC3_006707-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006707-T1.utr3p1KJC3_006707-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR011555
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
ProductH( )-transporting V0 sector ATPase subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:160308..161443 +
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