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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:168592..170083- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006710-T1 ID=KJC3_006710-T1|Name=KJC3_006710-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1492bp|location=Sequence derived from alignment at ch5:168592..170083- (Aspergillus niger KJC3)
TGTGTATATAAACAAATATAGCCTTGCAGACTTCATGCGAGACACCTACT
GTAACTTGAGCTCACCTGGGAAGTTCGTCGTTTGCTGCCCTCCATATTTA
TTGCAACAATCCTGCAGCACATGATATTGGTGAGCCAGGGTTCCCAATTA
CATATCAAAAAACTGCTAGATCAGTCAATATGAACGACAGCGGTAGTCCA
GCTGTAGACTTCAGCAGAGAGGATTCCATCGACCCGAGTGTGCTCGCAGG
TAAGCCGCGATGCCTCCGTGGGCAAGGCTACCACTGACAAATAGCGCCCA
GAACTACCCAAGGGCAGCCGTGTCATATCCACCGAGGAGCGTGGCATAAG
CTTCTGGGGCACTACTGGCCGGATAAACGTTGAATTGGCTGATGGGACAC
CCGTTTCATTCTTCATCAAGGCCGTGACGAAGGAAAGGGGCAAGAACATG
GTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGCTCCGAA
CTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCCCAGATA
CACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATGCCTGAC
CCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAGCGCATC
TCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCAACTTGC
CGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCTAAGAGC
ATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGATCCAGA
ATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGCGCCTCC
TCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTGATCCAT
GGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGGAGAGTC
GCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATGTGAGTTGG
CAGGTTTTTATGGTGAAGGCAATCAAACTGACCGATGGGACACCAATGAA
GACGAGTTTGGACAATGGCGGCCGATTTGTAACCGATTCGGTGACGAATA
CCTGGAGGCCTATCGCTCCTATGCTCAGGTTTCGCCGCCGGAGGAGGATT
ACGACGGGCGTTTGGATCTTTACAAGTTGTAAGAGCCTGACTGAGTGACG
AGATGATACAGAAAACGCTGATGAGTAGTAGACGGTTCAATACCCACGTA
TCCGCCCTGTTTGCAGATAATGCATCACTAAGAGAGCAGTATGAAATCTA
TCCTGCATCTTCGCGCTCAGCCTTTAACTGATCACTATTTTAGAATGCTC
AACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAGAATATGA
GGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTAAACGATT
TTGAGAAAGAATAGCTGCCATGATGATAGTGGCAATAATGCG back to topCoding sequence (CDS) from alignment at ch5:168592..170083- >KJC3_006710-T1 ID=KJC3_006710-T1|Name=KJC3_006710-T1|organism=Aspergillus niger KJC3|type=CDS|length=5325bp|location=Sequence derived from alignment at ch5:168592..170083- (Aspergillus niger KJC3)
AATGCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAG
AATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTA
AACGATTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGT
TTGCAGATAATGCATCACTAAGAGAGCAACGAGTTTGGACAATGGCGGCC
GATTTGTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATG
CTCAGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTAC
AAGTTAACTACCCAAGGGCAGCCGTGTCATATCCACCGAGGAGCGTGGCA
TAAGCTTCTGGGGCACTACTGGCCGGATAAACGTTGAATTGGCTGATGGG
ACACCCGTTTCATTCTTCATCAAGGCCGTGACGAAGGAAAGGGGCAAGAA
CATGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGCTC
CGAACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCCCA
GATACACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATGCC
TGACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAGCG
CATCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCAAC
TTGCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCTAA
GAGCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGATC
CAGAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGCGC
CTCCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTGAT
CCATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGGAG
AGTCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATATGAA
CGACAGCGGTAGTCCAGCTGTAGACTTCAGCAGAGAGGATTCCATCGACC
CGAGTGTGCTCGCAGAATGCTCAACGACATCCGAGATTTGGTGGCCAGGT
ACGGGTCTGGAGTAGAATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCT
CAGTCATGTGCTTTAAACGATTTTGAGAAAGAATAGACGGTTCAATACCC
ACGTATCCGCCCTGTTTGCAGATAATGCATCACTAAGAGAGCAACGAGTT
TGGACAATGGCGGCCGATTTGTAACCGATTCGGTGACGAATACCTGGAGG
CCTATCGCTCCTATGCTCAGGTTTCGCCGCCGGAGGAGGATTACGACGGG
CGTTTGGATCTTTACAAGTTAACTACCCAAGGGCAGCCGTGTCATATCCA
CCGAGGAGCGTGGCATAAGCTTCTGGGGCACTACTGGCCGGATAAACGTT
GAATTGGCTGATGGGACACCCGTTTCATTCTTCATCAAGGCCGTGACGAA
GGAAAGGGGCAAGAACATGGTTTACGGGGAGTATGAGTCTATGAAAGCCA
TATACAACGTTGCTCCGAACTTTGCCCCAAAGCCGATCGCGTGGGGGTCC
TACCAGGATTGCCCAGATACACACTTCTTCCTCTGCGAATATCGTGATAT
GGCTGCTGACATGCCTGACCCGGATAAATTCGCTGCTCGGTTGGCTGCTC
TCCATAACAACAGCGCATCTCCGACGGGGAAATTCGGCTTTCATGTGACC
ACCCACAATGGCAACTTGCCGCAAATGACTGACTGGGAGGATAGTTGGGA
GATTTTCTTTGCTAAGAGCATGAGACACGCTCTTGATCTTGAGATTGCAG
TCAAAGGCTGGGATCCAGAATTGGATTTCTTAGTTCCAGCGTTGTTTGAC
AGGGTCATACCGCGCCTCCTCCGGCCACTTGAGAGCGAAGGACGATCAGT
GAAGCCTTCGCTGATCCATGGTGATCTGTGGTATGCCAATTCGGGCATCG
ACACGGAGACAGGAGAGTCGCTTGTGTTTGATGCATGCTGCTTCTACGCC
CACAACGAATATGAACGACAGCGGTAGTCCAGCTGTAGACTTCAGCAGAG
AGGATTCCATCGACCCGAGTGTGCTCGCAGAATGCTCAACGACATCCGAG
ATTTGGTGGCCAGGTACGGGTCTGGAGTAGAATATGAGGCTTCAGAAGCG
TCTGAAGGGCGATCTCAGTCATGTGCTTTAAACGATTTTGAGAAAGAATA
GACGGTTCAATACCCACGTATCCGCCCTGTTTGCAGATAATGCATCACTA
AGAGAGCAACGAGTTTGGACAATGGCGGCCGATTTGTAACCGATTCGGTG
ACGAATACCTGGAGGCCTATCGCTCCTATGCTCAGGTTTCGCCGCCGGAG
GAGGATTACGACGGGCGTTTGGATCTTTACAAGTTAACTACCCAAGGGCA
GCCGTGTCATATCCACCGAGGAGCGTGGCATAAGCTTCTGGGGCACTACT
GGCCGGATAAACGTTGAATTGGCTGATGGGACACCCGTTTCATTCTTCAT
CAAGGCCGTGACGAAGGAAAGGGGCAAGAACATGGTTTACGGGGAGTATG
AGTCTATGAAAGCCATATACAACGTTGCTCCGAACTTTGCCCCAAAGCCG
ATCGCGTGGGGGTCCTACCAGGATTGCCCAGATACACACTTCTTCCTCTG
CGAATATCGTGATATGGCTGCTGACATGCCTGACCCGGATAAATTCGCTG
CTCGGTTGGCTGCTCTCCATAACAACAGCGCATCTCCGACGGGGAAATTC
GGCTTTCATGTGACCACCCACAATGGCAACTTGCCGCAAATGACTGACTG
GGAGGATAGTTGGGAGATTTTCTTTGCTAAGAGCATGAGACACGCTCTTG
ATCTTGAGATTGCAGTCAAAGGCTGGGATCCAGAATTGGATTTCTTAGTT
CCAGCGTTGTTTGACAGGGTCATACCGCGCCTCCTCCGGCCACTTGAGAG
CGAAGGACGATCAGTGAAGCCTTCGCTGATCCATGGTGATCTGTGGTATG
CCAATTCGGGCATCGACACGGAGACAGGAGAGTCGCTTGTGTTTGATGCA
TGCTGCTTCTACGCCCACAACGAATATGAACGACAGCGGTAGTCCAGCTG
TAGACTTCAGCAGAGAGGATTCCATCGACCCGAGTGTGCTCGCAGAATGC
TCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAGAATAT
GAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTAAACGA
TTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGTTTGCA
GATAATGCATCACTAAGAGAGCAACGAGTTTGGACAATGGCGGCCGATTT
GTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATGCTCAG
GTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTACAAGTT
AACTACCCAAGGGCAGCCGTGTCATATCCACCGAGGAGCGTGGCATAAGC
TTCTGGGGCACTACTGGCCGGATAAACGTTGAATTGGCTGATGGGACACC
CGTTTCATTCTTCATCAAGGCCGTGACGAAGGAAAGGGGCAAGAACATGG
TTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGCTCCGAAC
TTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCCCAGATAC
ACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATGCCTGACC
CGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAGCGCATCT
CCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCAACTTGCC
GCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCTAAGAGCA
TGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGATCCAGAA
TTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGCGCCTCCT
CCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTGATCCATG
GTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGGAGAGTCG
CTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATATGAACGACA
GCGGTAGTCCAGCTGTAGACTTCAGCAGAGAGGATTCCATCGACCCGAGT
GTGCTCGCAGAATGCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGG
TCTGGAGTAGAATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTC
ATGTGCTTTAAACGATTTTGAGAAAGAATAGACGGTTCAATACCCACGTA
TCCGCCCTGTTTGCAGATAATGCATCACTAAGAGAGCAACGAGTTTGGAC
AATGGCGGCCGATTTGTAACCGATTCGGTGACGAATACCTGGAGGCCTAT
CGCTCCTATGCTCAGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTT
GGATCTTTACAAGTTAACTACCCAAGGGCAGCCGTGTCATATCCACCGAG
GAGCGTGGCATAAGCTTCTGGGGCACTACTGGCCGGATAAACGTTGAATT
GGCTGATGGGACACCCGTTTCATTCTTCATCAAGGCCGTGACGAAGGAAA
GGGGCAAGAACATGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATAC
AACGTTGCTCCGAACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCA
GGATTGCCCAGATACACACTTCTTCCTCTGCGAATATCGTGATATGGCTG
CTGACATGCCTGACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCAT
AACAACAGCGCATCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCA
CAATGGCAACTTGCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTT
TCTTTGCTAAGAGCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAA
GGCTGGGATCCAGAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGT
CATACCGCGCCTCCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGC
CTTCGCTGATCCATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACG
GAGACAGGAGAGTCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAA
CGAATATGAACGACAGCGGTAGTCCAGCTGTAGACTTCAGCAGAGAGGAT
TCCATCGACCCGAGTGTGCTCGCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006710-T1.utr3p1 | KJC3_006710-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006710-T1.utr5p1 | KJC3_006710-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR016477 |
| DBxref | PFAM:PF03881 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:168592..170083 - |
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