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KJC3_006710-T2, KJC3_006710-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006710-T2
Unique NameKJC3_006710-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:168592..170083-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006710-T2 ID=KJC3_006710-T2|Name=KJC3_006710-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1492bp|location=Sequence derived from alignment at ch5:168592..170083- (Aspergillus niger KJC3)
TGTGTATATAAACAAATATAGCCTTGCAGACTTCATGCGAGACACCTACT
GTAACTTGAGCTCACCTGGGAAGTTCGTCGTTTGCTGCCCTCCATATTTA
TTGCAACAATCCTGCAGCACATGATATTGGTGAGCCAGGGTTCCCAATTA
CATATCAAAAAACTGCTAGATCAGTCAATATGAACGACAGCGGTAGTCCA
GCTGTAGACTTCAGCAGAGAGGATTCCATCGACCCGAGTGTGCTCGCAGG
TAAGCCGCGATGCCTCCGTGGGCAAGGCTACCACTGACAAATAGCGCCCA
GAACTACCCAAGGGCAGCCGTGTCATATCCACCGAGGAGCGTGGCATAAG
CTTCTGGGGCACTACTGGCCGGATAAACGTTGAATTGGCTGATGGGACAC
CCGTTTCATTCTTCATCAAGGCCGTGACGAAGGAAAGGGGCAAGAACATG
GTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGCTCCGAA
CTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCCCAGATA
CACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATGCCTGAC
CCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAGCGCATC
TCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCAACTTGC
CGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCTAAGAGC
ATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGATCCAGA
ATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGCGCCTCC
TCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTGATCCAT
GGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGGAGAGTC
GCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATGTGAGTTGG
CAGGTTTTTATGGTGAAGGCAATCAAACTGACCGATGGGACACCAATGAA
GACGAGTTTGGACAATGGCGGCCGATTTGTAACCGATTCGGTGACGAATA
CCTGGAGGCCTATCGCTCCTATGCTCAGGTTTCGCCGCCGGAGGAGGATT
ACGACGGGCGTTTGGATCTTTACAAGTTGTAAGAGCCTGACTGAGTGACG
AGATGATACAGAAAACGCTGATGAGTAGTAGACGGTTCAATACCCACGTA
TCCGCCCTGTTTGCAGATAATGCATCACTAAGAGAGCAGTATGAAATCTA
TCCTGCATCTTCGCGCTCAGCCTTTAACTGATCACTATTTTAGAATGCTC
AACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAGAATATGA
GGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTAAACGATT
TTGAGAAAGAATAGCTGCCATGATGATAGTGGCAATAATGCG
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Coding sequence (CDS) from alignment at ch5:168592..170083-

>KJC3_006710-T2 ID=KJC3_006710-T2|Name=KJC3_006710-T2|organism=Aspergillus niger KJC3|type=CDS|length=3396bp|location=Sequence derived from alignment at ch5:168592..170083- (Aspergillus niger KJC3)
AATGCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAG
AATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTA
AACGATTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGT
TTGCAGATAATGCATCACTAAGAGAGCAACGAGTTTGGACAATGGCGGCC
GATTTGTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATG
CTCAGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTAC
AAGTTATGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTT
GCTCCGAACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTG
CCCAGATACACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACA
TGCCTGACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAAC
AGCGCATCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGG
CAACTTGCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTG
CTAAGAGCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGG
GATCCAGAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACC
GCGCCTCCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGC
TGATCCATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACA
GGAGAGTCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATA
ATGCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAGA
ATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTAA
ACGATTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGTT
TGCAGATAATGCATCACTAAGAGAGCAACGAGTTTGGACAATGGCGGCCG
ATTTGTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATGC
TCAGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTACA
AGTTATGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTG
CTCCGAACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGC
CCAGATACACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACAT
GCCTGACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACA
GCGCATCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGC
AACTTGCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGC
TAAGAGCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGG
ATCCAGAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCG
CGCCTCCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCT
GATCCATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAG
GAGAGTCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATAA
TGCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAGAA
TATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTAAA
CGATTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGTTT
GCAGATAATGCATCACTAAGAGAGCAACGAGTTTGGACAATGGCGGCCGA
TTTGTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATGCT
CAGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTACAA
GTTATGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGC
TCCGAACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCC
CAGATACACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATG
CCTGACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAG
CGCATCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCA
ACTTGCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCT
AAGAGCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGA
TCCAGAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGC
GCCTCCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTG
ATCCATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGG
AGAGTCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATAAT
GCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAGAAT
ATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTAAAC
GATTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGTTTG
CAGATAATGCATCACTAAGAGAGCAACGAGTTTGGACAATGGCGGCCGAT
TTGTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATGCTC
AGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTACAAG
TTATGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGCT
CCGAACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCCC
AGATACACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATGC
CTGACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAGC
GCATCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCAA
CTTGCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCTA
AGAGCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGAT
CCAGAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGCG
CCTCCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTGA
TCCATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGGA
GAGTCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006710KJC3_006710Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006710-T2KJC3_006710-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006710-T2.cdsKJC3_006710-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006710-T2.utr3p1KJC3_006710-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006710-T2.exon6KJC3_006710-T2.exon6Aspergillus niger KJC3exon
KJC3_006710-T2.exon5KJC3_006710-T2.exon5Aspergillus niger KJC3exon
KJC3_006710-T2.exon4KJC3_006710-T2.exon4Aspergillus niger KJC3exon
KJC3_006710-T2.exon3KJC3_006710-T2.exon3Aspergillus niger KJC3exon
KJC3_006710-T2.exon2KJC3_006710-T2.exon2Aspergillus niger KJC3exon
KJC3_006710-T2.exon1KJC3_006710-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006710-T2.utr5p3KJC3_006710-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_006710-T2.utr5p2KJC3_006710-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006710-T2.utr5p1KJC3_006710-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR016477
DBxrefPFAM:PF03881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:168592..170083 -
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