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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:205245..206619- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006723-T1 ID=KJC3_006723-T1|Name=KJC3_006723-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1375bp|location=Sequence derived from alignment at ch5:205245..206619- (Aspergillus niger KJC3)
ATGGGCATACAGAATGAGGGGCTAGAAGCTCCAAACGAGCTGTCCAACGA
GCATGACGAACACCTCCAGCCACCAACCGAGGCTAGTTCAGAGATACAGC
CGATGCCCAACGGAGGACTGGAAGGTTGGCTCAGTGTACTGGCGGGCTTC
TGCGTCTTCGTCAACTCCTGGTACCTACACCCATCACCAATCCCCAAACA
CAGTCCTAACATCTAGCAGGGGGCTTATCAGCTGCTATGGCGCTTTCCAG
GAATTCTACCAAACCGTCCTCCTCCCGAACGAATCACCTTCCACGATCTC
CTGGATCGGTAGTATCCAAGCCACCCTGATCGTGATGGTCGGTATGGTGA
CCGGCCCCCTAGTGGACTCAGGCTACCTCCGACCCTTGATCGTCAGCGGA
TCCTTCCTAGTCGTATTCGGGATGGTGATGCTCAGCCTAGCAACAGAATA
CTACCAGGTTCTTCTGGCACAGGGCTTCTGCGTCGGAATAGGTGGCGGCA
TCACATATATCCCAGCAATGGTAGTCATCTCCTCGCATTTCACCACCAAG
CGCCCCATCGCCATCGGCTGCGCTTCTATCGGATCCAGCGTCGGTAGCGT
CATATTTCCAATCCTCTTCCGCCAAGTCCAACCCATCATCAACTTCGCCT
GGAGCGTCCGCTGCATCGCATTCATTAACCTCTTCCTCGCCCTCATTACC
TGCGCTATCCTTTGCCGTCGACCAGGCAAGAAAACCCGCACGAGAAGCCT
CATCGAACTCAAAGCCTTGACTCATCTCCCCTTCATGCTTCTCTCTCTCT
CCATGACCTGCGTCATGCTCGCTTACTACGTCCCTATCTTCTACGTCGCC
ACTTACGCCCGCTCCGCTCTCAACACCCCCACCAGCCTCTCCTTCTACCT
TGTCTCCATCACCAACGGCGCCTCCGCCTTCGGGCGCACAGTACCTTACT
TCCTCGCCTCGGGAGGCACCCGCATCAAACCCATCTTCATCCTGATCGCC
TTCGTCGCGGCAGCCGCAGTAGCCATGTTCACCTGGATCGCGACGACAAA
CACAGCGGGATTCATCGTCTGGGCCTGTTACTGGGGTTTCGTGAGCGGGG
TGCTGGTCACAGCTCCGACTTCCATTGTCGCTCATAAAGCATTCTGTCCT
GATAGTGATTTCCTCGGGACGAGAATGGGCATGATGTGGGGGATTAGTTC
GTTTGGGTCGTTGGTGGGCACGCCTGTTGCAGGGGCGTTGGTGAACTTGG
AAACGGCGGACTTTGTTCGTGCGCAGGTGTTTGCGGGTTGCTTGATGGTT
GGGGCGGTCGTGTTGCAGGTTTGGCCGGTTGTTTGTGTGGTTAGAGTGGA
TAGAGGGGTGGGGAAGGTGCAATAG back to topCoding sequence (CDS) from alignment at ch5:205245..206619- >KJC3_006723-T1 ID=KJC3_006723-T1|Name=KJC3_006723-T1|organism=Aspergillus niger KJC3|type=CDS|length=2652bp|location=Sequence derived from alignment at ch5:205245..206619- (Aspergillus niger KJC3)
GGGGCTTATCAGCTGCTATGGCGCTTTCCAGGAATTCTACCAAACCGTCC
TCCTCCCGAACGAATCACCTTCCACGATCTCCTGGATCGGTAGTATCCAA
GCCACCCTGATCGTGATGGTCGGTATGGTGACCGGCCCCCTAGTGGACTC
AGGCTACCTCCGACCCTTGATCGTCAGCGGATCCTTCCTAGTCGTATTCG
GGATGGTGATGCTCAGCCTAGCAACAGAATACTACCAGGTTCTTCTGGCA
CAGGGCTTCTGCGTCGGAATAGGTGGCGGCATCACATATATCCCAGCAAT
GGTAGTCATCTCCTCGCATTTCACCACCAAGCGCCCCATCGCCATCGGCT
GCGCTTCTATCGGATCCAGCGTCGGTAGCGTCATATTTCCAATCCTCTTC
CGCCAAGTCCAACCCATCATCAACTTCGCCTGGAGCGTCCGCTGCATCGC
ATTCATTAACCTCTTCCTCGCCCTCATTACCTGCGCTATCCTTTGCCGTC
GACCAGGCAAGAAAACCCGCACGAGAAGCCTCATCGAACTCAAAGCCTTG
ACTCATCTCCCCTTCATGCTTCTCTCTCTCTCCATGACCTGCGTCATGCT
CGCTTACTACGTCCCTATCTTCTACGTCGCCACTTACGCCCGCTCCGCTC
TCAACACCCCCACCAGCCTCTCCTTCTACCTTGTCTCCATCACCAACGGC
GCCTCCGCCTTCGGGCGCACAGTACCTTACTTCCTCGCCTCGGGAGGCAC
CCGCATCAAACCCATCTTCATCCTGATCGCCTTCGTCGCGGCAGCCGCAG
TAGCCATGTTCACCTGGATCGCGACGACAAACACAGCGGGATTCATCGTC
TGGGCCTGTTACTGGGGTTTCGTGAGCGGGGTGCTGGTCACAGCTCCGAC
TTCCATTGTCGCTCATAAAGCATTCTGTCCTGATAGTGATTTCCTCGGGA
CGAGAATGGGCATGATGTGGGGGATTAGTTCGTTTGGGTCGTTGGTGGGC
ACGCCTGTTGCAGGGGCGTTGGTGAACTTGGAAACGGCGGACTTTGTTCG
TGCGCAGGTGTTTGCGGGTTGCTTGATGGTTGGGGCGGTCGTGTTGCAGG
TTTGGCCGGTTGTTTGTGTGGTTAGAGTGGATAGAGGGGTGGGGAAGGTG
CAATAGATGGGCATACAGAATGAGGGGCTAGAAGCTCCAAACGAGCTGTC
CAACGAGCATGACGAACACCTCCAGCCACCAACCGAGGCTAGTTCAGAGA
TACAGCCGATGCCCAACGGAGGACTGGAAGGTTGGCTCAGTGTACTGGCG
GGCTTCTGCGTCTTCGTCAACTCCTGGGGGCTTATCAGCTGCTATGGCGC
TTTCCAGGAATTCTACCAAACCGTCCTCCTCCCGAACGAATCACCTTCCA
CGATCTCCTGGATCGGTAGTATCCAAGCCACCCTGATCGTGATGGTCGGT
ATGGTGACCGGCCCCCTAGTGGACTCAGGCTACCTCCGACCCTTGATCGT
CAGCGGATCCTTCCTAGTCGTATTCGGGATGGTGATGCTCAGCCTAGCAA
CAGAATACTACCAGGTTCTTCTGGCACAGGGCTTCTGCGTCGGAATAGGT
GGCGGCATCACATATATCCCAGCAATGGTAGTCATCTCCTCGCATTTCAC
CACCAAGCGCCCCATCGCCATCGGCTGCGCTTCTATCGGATCCAGCGTCG
GTAGCGTCATATTTCCAATCCTCTTCCGCCAAGTCCAACCCATCATCAAC
TTCGCCTGGAGCGTCCGCTGCATCGCATTCATTAACCTCTTCCTCGCCCT
CATTACCTGCGCTATCCTTTGCCGTCGACCAGGCAAGAAAACCCGCACGA
GAAGCCTCATCGAACTCAAAGCCTTGACTCATCTCCCCTTCATGCTTCTC
TCTCTCTCCATGACCTGCGTCATGCTCGCTTACTACGTCCCTATCTTCTA
CGTCGCCACTTACGCCCGCTCCGCTCTCAACACCCCCACCAGCCTCTCCT
TCTACCTTGTCTCCATCACCAACGGCGCCTCCGCCTTCGGGCGCACAGTA
CCTTACTTCCTCGCCTCGGGAGGCACCCGCATCAAACCCATCTTCATCCT
GATCGCCTTCGTCGCGGCAGCCGCAGTAGCCATGTTCACCTGGATCGCGA
CGACAAACACAGCGGGATTCATCGTCTGGGCCTGTTACTGGGGTTTCGTG
AGCGGGGTGCTGGTCACAGCTCCGACTTCCATTGTCGCTCATAAAGCATT
CTGTCCTGATAGTGATTTCCTCGGGACGAGAATGGGCATGATGTGGGGGA
TTAGTTCGTTTGGGTCGTTGGTGGGCACGCCTGTTGCAGGGGCGTTGGTG
AACTTGGAAACGGCGGACTTTGTTCGTGCGCAGGTGTTTGCGGGTTGCTT
GATGGTTGGGGCGGTCGTGTTGCAGGTTTGGCCGGTTGTTTGTGTGGTTA
GAGTGGATAGAGGGGTGGGGAAGGTGCAATAGATGGGCATACAGAATGAG
GGGCTAGAAGCTCCAAACGAGCTGTCCAACGAGCATGACGAACACCTCCA
GCCACCAACCGAGGCTAGTTCAGAGATACAGCCGATGCCCAACGGAGGAC
TGGAAGGTTGGCTCAGTGTACTGGCGGGCTTCTGCGTCTTCGTCAACTCC
TG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:205245..206619 - |
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