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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:207115..208070- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006724-T1 ID=KJC3_006724-T1|Name=KJC3_006724-T1|organism=Aspergillus niger KJC3|type=mRNA|length=956bp|location=Sequence derived from alignment at ch5:207115..208070- (Aspergillus niger KJC3)
CAAAGGATTATTGGGAAAAGGGTCAAACATTTATATCTTTACATGGTCAT
ATCTTTGTATTATGTTATGTTGTAGGAGAGTTTGTCATGTTCCGTTCCGC
TGAAGCACTCTTTCCAAGGTCATCGAAGGACACCAAAACCTCCCCAATCC
TTGACTGATTTCTTCGTTCGTTCGCGCACCACTAACGATTCTTTATCGCC
GCCAACCATGCGATTCCAAACCTGGCCCTTCCTCGTTGCTGAACTGGTGC
AATTTACTGCAGCCGCCAACATCACCGTTCTCGGGCAAGGGGACCTGCAC
CAAGATACCGCAGATTCCTTTCTATCCTGCCTCAACGCAACCGATATTCA
CTACCGGCTATATATCGACGCAGGCAGTACGGTCGTCCTTCCGCCCGGAA
ATCGCACACTTGATACACACGGAGTCGATGAGTTCCTGTTGCAGTGCATG
ATGATGGCATGTGGGACAATGGATATTGCGGCGGAGGACACAGACGAGGA
CAACGAGGAGCATATGGCCAGTGTGTACGCGTCCATTGTGACGTACGACT
GGCTCGTCGATCGAGGTGCTCGGGGTTTACGTGCGATTGGTACCAGGCCA
GCTAAGACCTTGGAGGATATTTTCGTTCGCGATGAGGAGGAGACCGATGT
AAGTTCGGGACTAAAAAACGAGTTTATTCATTTGCGTTTACAACTGACTG
TGAAATACAGGAGTAATATGCACCATTCAGCCTCTACTCCGGCGCGATAC
ACGGATCTTTCGAGTTCAGGGAGGAATCCAAATCGCATTCTAGTGGCACC
ATATGATATCCAGTTTAACCCCAAAACACCCATGTCGAACTGTGAGGGCT
TAACAAATCTGGTGTAAAGCTTCTATTGTAATATCTGGCTAGCAAGGTGT
TCCAGTGCTAGAACTGTGTTACGGGTGTATATACATTGTCTCCTAATGTC
TGCCGA back to topCoding sequence (CDS) from alignment at ch5:207115..208070- >KJC3_006724-T1 ID=KJC3_006724-T1|Name=KJC3_006724-T1|organism=Aspergillus niger KJC3|type=CDS|length=894bp|location=Sequence derived from alignment at ch5:207115..208070- (Aspergillus niger KJC3)
GAGTAAATGCGATTCCAAACCTGGCCCTTCCTCGTTGCTGAACTGGTGCA
ATTTACTGCAGCCGCCAACATCACCGTTCTCGGGCAAGGGGACCTGCACC
AAGATACCGCAGATTCCTTTCTATCCTGCCTCAACGCAACCGATATTCAC
TACCGGCTATATATCGACGCAGGCAGTACGGTCGTCCTTCCGCCCGGAAA
TCGCACACTTGATACACACGGAGTCGATGAGTTCCTGTTGCAGTGCATGA
TGATGGCATGTGGGACAATGGATATTGCGGCGGAGGACACAGACGAGGAC
AACGAGGAGCATATGGCCAGTGTGTACGCGTCCATTGTGACGTACGACTG
GCTCGTCGATCGAGGTGCTCGGGGTTTACGTGCGATTGGTACCAGGCCAG
CTAAGACCTTGGAGGATATTTTCGTTCGCGATGAGGAGGAGACCGATGAG
TAAATGCGATTCCAAACCTGGCCCTTCCTCGTTGCTGAACTGGTGCAATT
TACTGCAGCCGCCAACATCACCGTTCTCGGGCAAGGGGACCTGCACCAAG
ATACCGCAGATTCCTTTCTATCCTGCCTCAACGCAACCGATATTCACTAC
CGGCTATATATCGACGCAGGCAGTACGGTCGTCCTTCCGCCCGGAAATCG
CACACTTGATACACACGGAGTCGATGAGTTCCTGTTGCAGTGCATGATGA
TGGCATGTGGGACAATGGATATTGCGGCGGAGGACACAGACGAGGACAAC
GAGGAGCATATGGCCAGTGTGTACGCGTCCATTGTGACGTACGACTGGCT
CGTCGATCGAGGTGCTCGGGGTTTACGTGCGATTGGTACCAGGCCAGCTA
AGACCTTGGAGGATATTTTCGTTCGCGATGAGGAGGAGACCGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006724-T1.utr3p1 | KJC3_006724-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006724-T1.utr5p1 | KJC3_006724-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:207115..208070 - |
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