You are here

Home

KJC3_006739-T1, KJC3_006739-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006739-T1
Unique NameKJC3_006739-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:247996..250052-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006739-T1 ID=KJC3_006739-T1|Name=KJC3_006739-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2057bp|location=Sequence derived from alignment at ch5:247996..250052- (Aspergillus niger KJC3)
CAGCAGCGCTCCATCGTAATGTCTTCTTCTCTGCCTCATTCCCAACTGGA
CTGCGGTTGTACGACAGCACCATGAACTTCTCCAATTCCAAGGGAGGCGC
ATGGGGCCAGCAATGGCGGTCCTCGCCCCTTTTCATTGTCAGCGCCATGG
CCATGGCCCTGTTCACTGGTAACACCCCGATTGATCGCTTTTGTCCTACC
GTATCGGATTCCGCTCACAATATCTGTCACCTTATCTAGACACCTTTCTC
TACGCCTTCCTTGTCCCCATCCTCCCCTACGTTCTCGAAAACCGCCTCGG
ATTAGACGTATCCCTGACCCAGCGCGTGAGTTTCTCCTTGCTGTCGGAAA
CTGCCATCGCTGCTCTCGTTACAAGCCCATTTATTGGCCACTATGCCGAT
CGGATGTCCTCCAAGCGAATCTTGCTGGTCGGATCGCTGCTAGCTGCTTT
GTTCGGCTCCATAGTTCTAGCATTGGCGACATCAAGTAGGCCTCCATGCC
GCCAAGCTTTGGAATGTTGGCATGCTGACAGTCGTGCACAGCATTTACTC
TCTTTGCGGGGCGTCTTATTCAGGCAATTGCTAGCTCCTTCATCTGGGTG
GTCGGATACGCCACAATCGCGGACAATGTACAACCCGAACATCTGGGCAA
GACATACGGTGTTATTTCTCTGGTCGTCGCAGCAGGCACCTCAGGAGGCC
CGATGGTCGCGGGTATTCTGTTCGAACTGGGCGGGTACTGGGTAGCGTGG
TCTAGTGCCTTCCTCATACTTATCCTCGACATTATCCTTCGTCTGCTCAT
GCTGGAAAAGCCAGACATCCAAGGCGACGCGGAGTATTCTAGCAATGCGA
GTGTCGCATCGGATCCTGAACGTGCTCCTCTCCTGAGCAGTAACCCCGGC
CTCGAGGCCGACCTGGCAGGCTGGAAGTTTTATGTATATATCTTGCGGTA
TCGCCGCTTCCTCTGCGGCGTGATCAGCTATCTCTCCTTTGCTGTTCTAG
TCTCCAGCTTCGACACCACGCTTCCTCTCCATGTCCGGGATGTGTTCAGC
TGGGGTAGCTTCCCTGCTGGTATGATGTTCTTCGCTTTGCAAGGCCCCGG
GATCCTTCTGAGTCCCATCTGTGGCTGGTTGAAAGATCGGGTCGGGACCC
GATGGCCTACCACGATCGGCTTTTTGCTTCTCGCGCCTGTGATGTGGGTT
ATCGGCATGCCCGGTGACGAGCGATTCCCGTGGGCCAATGAGGGTGACCG
GGGAAAGGTCATCTACGCTGTCGGTGTTACATTGGTGGGATCCGTGTCCT
GTCTGCTAAACGGGGCCGGAACAATTGAAGCTACAGGTATGTACTCCTAT
AACAGTTCGAGGAATCAAACCCCATAGTCGAAATCTAACGCAAAAACAGT
CACAATCGACGAAGTCGAAGCCAAACACCCCGGCATCTTTGGCCCCAACG
GAGGCTACTCTCGTGCCCTCTCAGTAGCCAGTATGGGATGGACACTCGGG
GCATTCATTGGGCCCATCATCTCCGGCTACATCGCCGAACAAGTCGGATA
CTACGAGATGAGCTGCGTTATCGGTTTGCTCCCTTACCAATCCCAATTTT
GTGGCAACGCTAATGAAACTAGCGATTGTTTGTCTTCTCTCCGGCGTCAA
CACCTTCTTCAACCTAGACTCCAAGGTCCATTTCGACCGAGTGGCGGAAT
CCACCTAGACCACTAGACTTATTCTCCGACGCGACCGTCGTGCATACACG
TATATACCCGGGCGAGAGAAACTCCCGGTTGACACACATACTGACGATAC
ATCCAAAAGTTTTTACTCCTTGCATATACGAAAAGTTCATGCATCCTGCA
TTTAGCGTTTCAGTGTTAGCATATGAGAGATTCGGATTCAGGGACATATC
ACATTAGACGCGAAGCTGCGCATCCGTGCATCGACGTTGTATCTACTATC
TAGCGTTGTCTAATTTTTGATTGAAGTTGTCTAGACCCAACACATTAGCA
CGCCTGATACGAGACCGATCATCCGTGCGCGGAGACCTATCCTCCACTCA
AAGTTCT
back to top

Coding sequence (CDS) from alignment at ch5:247996..250052-

>KJC3_006739-T1 ID=KJC3_006739-T1|Name=KJC3_006739-T1|organism=Aspergillus niger KJC3|type=CDS|length=6990bp|location=Sequence derived from alignment at ch5:247996..250052- (Aspergillus niger KJC3)
CGATTGTTTGTCTTCTCTCCGGCGTCAACACCTTCTTCAACCTAGACTCC
AAGGTCCATTTCGACCGAGTGGCGGAATCCACCTAGTCACAATCGACGAA
GTCGAAGCCAAACACCCCGGCATCTTTGGCCCCAACGGAGGCTACTCTCG
TGCCCTCTCAGTAGCCAGTATGGGATGGACACTCGGGGCATTCATTGGGC
CCATCATCTCCGGCTACATCGCCGAACAAGTCGGATACTACGAGATGAGC
TGCGTTATCGCATTTACTCTCTTTGCGGGGCGTCTTATTCAGGCAATTGC
TAGCTCCTTCATCTGGGTGGTCGGATACGCCACAATCGCGGACAATGTAC
AACCCGAACATCTGGGCAAGACATACGGTGTTATTTCTCTGGTCGTCGCA
GCAGGCACCTCAGGAGGCCCGATGGTCGCGGGTATTCTGTTCGAACTGGG
CGGGTACTGGGTAGCGTGGTCTAGTGCCTTCCTCATACTTATCCTCGACA
TTATCCTTCGTCTGCTCATGCTGGAAAAGCCAGACATCCAAGGCGACGCG
GAGTATTCTAGCAATGCGAGTGTCGCATCGGATCCTGAACGTGCTCCTCT
CCTGAGCAGTAACCCCGGCCTCGAGGCCGACCTGGCAGGCTGGAAGTTTT
ATGTATATATCTTGCGGTATCGCCGCTTCCTCTGCGGCGTGATCAGCTAT
CTCTCCTTTGCTGTTCTAGTCTCCAGCTTCGACACCACGCTTCCTCTCCA
TGTCCGGGATGTGTTCAGCTGGGGTAGCTTCCCTGCTGGTATGATGTTCT
TCGCTTTGCAAGGCCCCGGGATCCTTCTGAGTCCCATCTGTGGCTGGTTG
AAAGATCGGGTCGGGACCCGATGGCCTACCACGATCGGCTTTTTGCTTCT
CGCGCCTGTGATGTGGGTTATCGGCATGCCCGGTGACGAGCGATTCCCGT
GGGCCAATGAGGGTGACCGGGGAAAGGTCATCTACGCTGTCGGTGTTACA
TTGGTGGGATCCGTGTCCTGTCTGCTAAACGGGGCCGGAACAATTGAAGC
TACAGACACCTTTCTCTACGCCTTCCTTGTCCCCATCCTCCCCTACGTTC
TCGAAAACCGCCTCGGATTAGACGTATCCCTGACCCAGCGCGTGAGTTTC
TCCTTGCTGTCGGAAACTGCCATCGCTGCTCTCGTTACAAGCCCATTTAT
TGGCCACTATGCCGATCGGATGTCCTCCAAGCGAATCTTGCTGGTCGGAT
CGCTGCTAGCTGCTTTGTTCGGCTCCATAGTTCTAGCATTGGCGACATCA
AATGAACTTCTCCAATTCCAAGGGAGGCGCATGGGGCCAGCAATGGCGGT
CCTCGCCCCTTTTCATTGTCAGCGCCATGGCCATGGCCCTGTTCACTGCG
ATTGTTTGTCTTCTCTCCGGCGTCAACACCTTCTTCAACCTAGACTCCAA
GGTCCATTTCGACCGAGTGGCGGAATCCACCTAGTCACAATCGACGAAGT
CGAAGCCAAACACCCCGGCATCTTTGGCCCCAACGGAGGCTACTCTCGTG
CCCTCTCAGTAGCCAGTATGGGATGGACACTCGGGGCATTCATTGGGCCC
ATCATCTCCGGCTACATCGCCGAACAAGTCGGATACTACGAGATGAGCTG
CGTTATCGCATTTACTCTCTTTGCGGGGCGTCTTATTCAGGCAATTGCTA
GCTCCTTCATCTGGGTGGTCGGATACGCCACAATCGCGGACAATGTACAA
CCCGAACATCTGGGCAAGACATACGGTGTTATTTCTCTGGTCGTCGCAGC
AGGCACCTCAGGAGGCCCGATGGTCGCGGGTATTCTGTTCGAACTGGGCG
GGTACTGGGTAGCGTGGTCTAGTGCCTTCCTCATACTTATCCTCGACATT
ATCCTTCGTCTGCTCATGCTGGAAAAGCCAGACATCCAAGGCGACGCGGA
GTATTCTAGCAATGCGAGTGTCGCATCGGATCCTGAACGTGCTCCTCTCC
TGAGCAGTAACCCCGGCCTCGAGGCCGACCTGGCAGGCTGGAAGTTTTAT
GTATATATCTTGCGGTATCGCCGCTTCCTCTGCGGCGTGATCAGCTATCT
CTCCTTTGCTGTTCTAGTCTCCAGCTTCGACACCACGCTTCCTCTCCATG
TCCGGGATGTGTTCAGCTGGGGTAGCTTCCCTGCTGGTATGATGTTCTTC
GCTTTGCAAGGCCCCGGGATCCTTCTGAGTCCCATCTGTGGCTGGTTGAA
AGATCGGGTCGGGACCCGATGGCCTACCACGATCGGCTTTTTGCTTCTCG
CGCCTGTGATGTGGGTTATCGGCATGCCCGGTGACGAGCGATTCCCGTGG
GCCAATGAGGGTGACCGGGGAAAGGTCATCTACGCTGTCGGTGTTACATT
GGTGGGATCCGTGTCCTGTCTGCTAAACGGGGCCGGAACAATTGAAGCTA
CAGACACCTTTCTCTACGCCTTCCTTGTCCCCATCCTCCCCTACGTTCTC
GAAAACCGCCTCGGATTAGACGTATCCCTGACCCAGCGCGTGAGTTTCTC
CTTGCTGTCGGAAACTGCCATCGCTGCTCTCGTTACAAGCCCATTTATTG
GCCACTATGCCGATCGGATGTCCTCCAAGCGAATCTTGCTGGTCGGATCG
CTGCTAGCTGCTTTGTTCGGCTCCATAGTTCTAGCATTGGCGACATCAAA
TGAACTTCTCCAATTCCAAGGGAGGCGCATGGGGCCAGCAATGGCGGTCC
TCGCCCCTTTTCATTGTCAGCGCCATGGCCATGGCCCTGTTCACTGCGAT
TGTTTGTCTTCTCTCCGGCGTCAACACCTTCTTCAACCTAGACTCCAAGG
TCCATTTCGACCGAGTGGCGGAATCCACCTAGTCACAATCGACGAAGTCG
AAGCCAAACACCCCGGCATCTTTGGCCCCAACGGAGGCTACTCTCGTGCC
CTCTCAGTAGCCAGTATGGGATGGACACTCGGGGCATTCATTGGGCCCAT
CATCTCCGGCTACATCGCCGAACAAGTCGGATACTACGAGATGAGCTGCG
TTATCGCATTTACTCTCTTTGCGGGGCGTCTTATTCAGGCAATTGCTAGC
TCCTTCATCTGGGTGGTCGGATACGCCACAATCGCGGACAATGTACAACC
CGAACATCTGGGCAAGACATACGGTGTTATTTCTCTGGTCGTCGCAGCAG
GCACCTCAGGAGGCCCGATGGTCGCGGGTATTCTGTTCGAACTGGGCGGG
TACTGGGTAGCGTGGTCTAGTGCCTTCCTCATACTTATCCTCGACATTAT
CCTTCGTCTGCTCATGCTGGAAAAGCCAGACATCCAAGGCGACGCGGAGT
ATTCTAGCAATGCGAGTGTCGCATCGGATCCTGAACGTGCTCCTCTCCTG
AGCAGTAACCCCGGCCTCGAGGCCGACCTGGCAGGCTGGAAGTTTTATGT
ATATATCTTGCGGTATCGCCGCTTCCTCTGCGGCGTGATCAGCTATCTCT
CCTTTGCTGTTCTAGTCTCCAGCTTCGACACCACGCTTCCTCTCCATGTC
CGGGATGTGTTCAGCTGGGGTAGCTTCCCTGCTGGTATGATGTTCTTCGC
TTTGCAAGGCCCCGGGATCCTTCTGAGTCCCATCTGTGGCTGGTTGAAAG
ATCGGGTCGGGACCCGATGGCCTACCACGATCGGCTTTTTGCTTCTCGCG
CCTGTGATGTGGGTTATCGGCATGCCCGGTGACGAGCGATTCCCGTGGGC
CAATGAGGGTGACCGGGGAAAGGTCATCTACGCTGTCGGTGTTACATTGG
TGGGATCCGTGTCCTGTCTGCTAAACGGGGCCGGAACAATTGAAGCTACA
GACACCTTTCTCTACGCCTTCCTTGTCCCCATCCTCCCCTACGTTCTCGA
AAACCGCCTCGGATTAGACGTATCCCTGACCCAGCGCGTGAGTTTCTCCT
TGCTGTCGGAAACTGCCATCGCTGCTCTCGTTACAAGCCCATTTATTGGC
CACTATGCCGATCGGATGTCCTCCAAGCGAATCTTGCTGGTCGGATCGCT
GCTAGCTGCTTTGTTCGGCTCCATAGTTCTAGCATTGGCGACATCAAATG
AACTTCTCCAATTCCAAGGGAGGCGCATGGGGCCAGCAATGGCGGTCCTC
GCCCCTTTTCATTGTCAGCGCCATGGCCATGGCCCTGTTCACTGCGATTG
TTTGTCTTCTCTCCGGCGTCAACACCTTCTTCAACCTAGACTCCAAGGTC
CATTTCGACCGAGTGGCGGAATCCACCTAGTCACAATCGACGAAGTCGAA
GCCAAACACCCCGGCATCTTTGGCCCCAACGGAGGCTACTCTCGTGCCCT
CTCAGTAGCCAGTATGGGATGGACACTCGGGGCATTCATTGGGCCCATCA
TCTCCGGCTACATCGCCGAACAAGTCGGATACTACGAGATGAGCTGCGTT
ATCGCATTTACTCTCTTTGCGGGGCGTCTTATTCAGGCAATTGCTAGCTC
CTTCATCTGGGTGGTCGGATACGCCACAATCGCGGACAATGTACAACCCG
AACATCTGGGCAAGACATACGGTGTTATTTCTCTGGTCGTCGCAGCAGGC
ACCTCAGGAGGCCCGATGGTCGCGGGTATTCTGTTCGAACTGGGCGGGTA
CTGGGTAGCGTGGTCTAGTGCCTTCCTCATACTTATCCTCGACATTATCC
TTCGTCTGCTCATGCTGGAAAAGCCAGACATCCAAGGCGACGCGGAGTAT
TCTAGCAATGCGAGTGTCGCATCGGATCCTGAACGTGCTCCTCTCCTGAG
CAGTAACCCCGGCCTCGAGGCCGACCTGGCAGGCTGGAAGTTTTATGTAT
ATATCTTGCGGTATCGCCGCTTCCTCTGCGGCGTGATCAGCTATCTCTCC
TTTGCTGTTCTAGTCTCCAGCTTCGACACCACGCTTCCTCTCCATGTCCG
GGATGTGTTCAGCTGGGGTAGCTTCCCTGCTGGTATGATGTTCTTCGCTT
TGCAAGGCCCCGGGATCCTTCTGAGTCCCATCTGTGGCTGGTTGAAAGAT
CGGGTCGGGACCCGATGGCCTACCACGATCGGCTTTTTGCTTCTCGCGCC
TGTGATGTGGGTTATCGGCATGCCCGGTGACGAGCGATTCCCGTGGGCCA
ATGAGGGTGACCGGGGAAAGGTCATCTACGCTGTCGGTGTTACATTGGTG
GGATCCGTGTCCTGTCTGCTAAACGGGGCCGGAACAATTGAAGCTACAGA
CACCTTTCTCTACGCCTTCCTTGTCCCCATCCTCCCCTACGTTCTCGAAA
ACCGCCTCGGATTAGACGTATCCCTGACCCAGCGCGTGAGTTTCTCCTTG
CTGTCGGAAACTGCCATCGCTGCTCTCGTTACAAGCCCATTTATTGGCCA
CTATGCCGATCGGATGTCCTCCAAGCGAATCTTGCTGGTCGGATCGCTGC
TAGCTGCTTTGTTCGGCTCCATAGTTCTAGCATTGGCGACATCAAATGAA
CTTCTCCAATTCCAAGGGAGGCGCATGGGGCCAGCAATGGCGGTCCTCGC
CCCTTTTCATTGTCAGCGCCATGGCCATGGCCCTGTTCACTGCGATTGTT
TGTCTTCTCTCCGGCGTCAACACCTTCTTCAACCTAGACTCCAAGGTCCA
TTTCGACCGAGTGGCGGAATCCACCTAGTCACAATCGACGAAGTCGAAGC
CAAACACCCCGGCATCTTTGGCCCCAACGGAGGCTACTCTCGTGCCCTCT
CAGTAGCCAGTATGGGATGGACACTCGGGGCATTCATTGGGCCCATCATC
TCCGGCTACATCGCCGAACAAGTCGGATACTACGAGATGAGCTGCGTTAT
CGCATTTACTCTCTTTGCGGGGCGTCTTATTCAGGCAATTGCTAGCTCCT
TCATCTGGGTGGTCGGATACGCCACAATCGCGGACAATGTACAACCCGAA
CATCTGGGCAAGACATACGGTGTTATTTCTCTGGTCGTCGCAGCAGGCAC
CTCAGGAGGCCCGATGGTCGCGGGTATTCTGTTCGAACTGGGCGGGTACT
GGGTAGCGTGGTCTAGTGCCTTCCTCATACTTATCCTCGACATTATCCTT
CGTCTGCTCATGCTGGAAAAGCCAGACATCCAAGGCGACGCGGAGTATTC
TAGCAATGCGAGTGTCGCATCGGATCCTGAACGTGCTCCTCTCCTGAGCA
GTAACCCCGGCCTCGAGGCCGACCTGGCAGGCTGGAAGTTTTATGTATAT
ATCTTGCGGTATCGCCGCTTCCTCTGCGGCGTGATCAGCTATCTCTCCTT
TGCTGTTCTAGTCTCCAGCTTCGACACCACGCTTCCTCTCCATGTCCGGG
ATGTGTTCAGCTGGGGTAGCTTCCCTGCTGGTATGATGTTCTTCGCTTTG
CAAGGCCCCGGGATCCTTCTGAGTCCCATCTGTGGCTGGTTGAAAGATCG
GGTCGGGACCCGATGGCCTACCACGATCGGCTTTTTGCTTCTCGCGCCTG
TGATGTGGGTTATCGGCATGCCCGGTGACGAGCGATTCCCGTGGGCCAAT
GAGGGTGACCGGGGAAAGGTCATCTACGCTGTCGGTGTTACATTGGTGGG
ATCCGTGTCCTGTCTGCTAAACGGGGCCGGAACAATTGAAGCTACAGACA
CCTTTCTCTACGCCTTCCTTGTCCCCATCCTCCCCTACGTTCTCGAAAAC
CGCCTCGGATTAGACGTATCCCTGACCCAGCGCGTGAGTTTCTCCTTGCT
GTCGGAAACTGCCATCGCTGCTCTCGTTACAAGCCCATTTATTGGCCACT
ATGCCGATCGGATGTCCTCCAAGCGAATCTTGCTGGTCGGATCGCTGCTA
GCTGCTTTGTTCGGCTCCATAGTTCTAGCATTGGCGACATCAAATGAACT
TCTCCAATTCCAAGGGAGGCGCATGGGGCCAGCAATGGCGGTCCTCGCCC
CTTTTCATTGTCAGCGCCATGGCCATGGCCCTGTTCACTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006739KJC3_006739Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006739-T1KJC3_006739-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006739-T1.cdsKJC3_006739-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006739-T1.utr3p1KJC3_006739-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006739-T1.exon5KJC3_006739-T1.exon5Aspergillus niger KJC3exon
KJC3_006739-T1.exon4KJC3_006739-T1.exon4Aspergillus niger KJC3exon
KJC3_006739-T1.exon3KJC3_006739-T1.exon3Aspergillus niger KJC3exon
KJC3_006739-T1.exon2KJC3_006739-T1.exon2Aspergillus niger KJC3exon
KJC3_006739-T1.exon1KJC3_006739-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006739-T1.utr5p1KJC3_006739-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefInterPro:IPR001958
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:247996..250052 -
Powered by Drupal