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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:340201..341163- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006751-T1 ID=KJC3_006751-T1|Name=KJC3_006751-T1|organism=Aspergillus niger KJC3|type=mRNA|length=963bp|location=Sequence derived from alignment at ch5:340201..341163- (Aspergillus niger KJC3)
ATGGCCGATGTAAGAATGTCCGCTGACTTGGACCTCTACGGCTCCCTCCC
CGGACCACCCTCCACCGCTGACGAGACTTGGCCGGACTCTTTCCCTTTCT
ATCTGGACAACACCGTTCCTCAAGACTGTCTTTCTCTTCCTCTGTTTGAA
GATAACAACCAATGGCTTCTCAATTCCTTCTCGCCGCCGGTGTCTTGGGC
CACTGGAGCGGCTCTTCAAACAAACTCCACCGCTAGCTCGGAAGCTAGCT
TCATCACTCCCTGCCAGACTGTACACAATCCTAGTATTTTTTACGAGCAA
AAATCCCCCCGAATGCAGACTATGTTTAAGCAATTCATACCGTCTCAGAT
GCCTCCAACACCCATCCACGAAATTACCTCGCGGGGTAGCATCACAAGTG
TTAGCAGCGGTAATAGCGCTGACAGCAACCGAACTCGGTTCAGTGTTTCC
AGCTACAGCAGCAGTAATGACGGTCCAGTATACAGTCCTCAAAAGAGCTC
CCATCGGCCTCCCTCTACAGGATTTGGGATGAACGAGCGCGGACGATGCA
AACGGGAGCGCTTCCTTGAGCGCAACCGCGTGGCTGCCAATAAATGTCGC
AAGAAGAAGAAGGAGCATGCCAAGCAGCTGGAGTGTCGCTGCGAGACGGT
GTCTCGGGAAAAAATGTTCTTAGAGAGCCAAGTTGATCACCTGCGGGGCG
AAATTCTAAGTCTCAAGAATGAGCTGCTGCGACATTCCCACTGTGGAGAT
GCGAGGATTAAGTGCCATTTGGCAAAGATGGCAAAGCAGCTTTCTAAAAA
GACTAACACCACGACCCCGAGTCCAGAAAAAAAGAAAGAGTCATTACCCC
CGATGAATAATTTCAAGCACGAGCAGGAAATGACAATGGATCTTGAGGAT
CTGGTGCAGCTTCCGGCTGCCGCGGATGGTTCAGTAACAGAAAGACAAAA
AGAGATTGAGTAA back to topCoding sequence (CDS) from alignment at ch5:340201..341163- >KJC3_006751-T1 ID=KJC3_006751-T1|Name=KJC3_006751-T1|organism=Aspergillus niger KJC3|type=CDS|length=963bp|location=Sequence derived from alignment at ch5:340201..341163- (Aspergillus niger KJC3)
ATGGCCGATGTAAGAATGTCCGCTGACTTGGACCTCTACGGCTCCCTCCC
CGGACCACCCTCCACCGCTGACGAGACTTGGCCGGACTCTTTCCCTTTCT
ATCTGGACAACACCGTTCCTCAAGACTGTCTTTCTCTTCCTCTGTTTGAA
GATAACAACCAATGGCTTCTCAATTCCTTCTCGCCGCCGGTGTCTTGGGC
CACTGGAGCGGCTCTTCAAACAAACTCCACCGCTAGCTCGGAAGCTAGCT
TCATCACTCCCTGCCAGACTGTACACAATCCTAGTATTTTTTACGAGCAA
AAATCCCCCCGAATGCAGACTATGTTTAAGCAATTCATACCGTCTCAGAT
GCCTCCAACACCCATCCACGAAATTACCTCGCGGGGTAGCATCACAAGTG
TTAGCAGCGGTAATAGCGCTGACAGCAACCGAACTCGGTTCAGTGTTTCC
AGCTACAGCAGCAGTAATGACGGTCCAGTATACAGTCCTCAAAAGAGCTC
CCATCGGCCTCCCTCTACAGGATTTGGGATGAACGAGCGCGGACGATGCA
AACGGGAGCGCTTCCTTGAGCGCAACCGCGTGGCTGCCAATAAATGTCGC
AAGAAGAAGAAGGAGCATGCCAAGCAGCTGGAGTGTCGCTGCGAGACGGT
GTCTCGGGAAAAAATGTTCTTAGAGAGCCAAGTTGATCACCTGCGGGGCG
AAATTCTAAGTCTCAAGAATGAGCTGCTGCGACATTCCCACTGTGGAGAT
GCGAGGATTAAGTGCCATTTGGCAAAGATGGCAAAGCAGCTTTCTAAAAA
GACTAACACCACGACCCCGAGTCCAGAAAAAAAGAAAGAGTCATTACCCC
CGATGAATAATTTCAAGCACGAGCAGGAAATGACAATGGATCTTGAGGAT
CTGGTGCAGCTTCCGGCTGCCGCGGATGGTTCAGTAACAGAAAGACAAAA
AGAGATTGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| DBxref | InterPro:IPR002112 |
| DBxref | PFAM:PF07716 |
| DBxref | PFAM:PF00170 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:340201..341163 - |
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