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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:365197..366225+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006752-T1 ID=KJC3_006752-T1|Name=KJC3_006752-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1029bp|location=Sequence derived from alignment at ch5:365197..366225+ (Aspergillus niger KJC3)
ATGAAGACCTTTGGTGCCGCTTCCCTTATCACTGCTTTGCTCGCCGCGAG
CGAAGGAGCAAATGCCTTCACCAAGACCAACACCAGTCCGCTGAAAGAGG
TAGCAGAAAGCAAGGGCATCCTCATTGGGTCCGGGGCTGTCAATCCGAAT
TATCTCAATGATTCTCTCTTTGCGACCGTTCTTGCCGATCAGTTCCAAAG
CCTCGCTCCCGAGAATGAGTTGAAGTGGACATTCATCCACCCGACCCCAA
ACCAGTACAATTGGAATGCGACCGACCGCCTCGTCAGCTTCGCGGAAAAG
CACAGTATGGTGGTGAAGGGGCATGGGCTCATCTCGAGTTGCTGCAACCC
CGACTACCTCCTCAACATCACCGATCCCAAACAGTTCCGTGCCGCCATGG
TCACTCACTTTGACGCGATCATGCACCGGTACGCTGGCAAGATGGATCGG
TGGGACGTTGTCATTGAGGCTCTTAAGACGATGGGTGGCGGCCTACAGGT
CAATGATTTCTACAAGGTGCTCGGGCCTGGATACATTGCAGATGCCTTTC
ATATCGCTCGGGCAGCGGGCCCCGAAGCCAAACTGTTTCTCAGCGAGAGC
CTGGTCGAGACGTATCCCGGTAAGCGTCAAGAGCTCTACGATCTAGTCTC
TGGTCTTGTATCAGACAATGTCCCGATCGACGGCGTCGCTCTACAGATGC
ACGTTACCGAAGCAGCTCCGATTCCCGGGGTGATTACGGATATAGTCAAG
TCCTACAACGCTCTTGGGTTGGAGGTATCCATCTCTGAAATGGATGTCCA
TACGCTTAATACTACCCTCGAAACTGATATCTACAATGCCGTCCTCACCG
AGGCCCTTGGCGCTGGAATTACTGATATCACTTTCTGGGGATTCACCGAT
AAGCACGCTTACACCTGGATCAAGGGCGCGAAGCCATTGATGTTCGACGA
GTACTACAACCCCAAGGGTGAATTCTACGCTACCCACACTGCCTTGACCA
GCTTCGACAACACAACAAGCCCTAAATGA back to topCoding sequence (CDS) from alignment at ch5:365197..366225+ >KJC3_006752-T1 ID=KJC3_006752-T1|Name=KJC3_006752-T1|organism=Aspergillus niger KJC3|type=CDS|length=1029bp|location=Sequence derived from alignment at ch5:365197..366225+ (Aspergillus niger KJC3)
ATGAAGACCTTTGGTGCCGCTTCCCTTATCACTGCTTTGCTCGCCGCGAG
CGAAGGAGCAAATGCCTTCACCAAGACCAACACCAGTCCGCTGAAAGAGG
TAGCAGAAAGCAAGGGCATCCTCATTGGGTCCGGGGCTGTCAATCCGAAT
TATCTCAATGATTCTCTCTTTGCGACCGTTCTTGCCGATCAGTTCCAAAG
CCTCGCTCCCGAGAATGAGTTGAAGTGGACATTCATCCACCCGACCCCAA
ACCAGTACAATTGGAATGCGACCGACCGCCTCGTCAGCTTCGCGGAAAAG
CACAGTATGGTGGTGAAGGGGCATGGGCTCATCTCGAGTTGCTGCAACCC
CGACTACCTCCTCAACATCACCGATCCCAAACAGTTCCGTGCCGCCATGG
TCACTCACTTTGACGCGATCATGCACCGGTACGCTGGCAAGATGGATCGG
TGGGACGTTGTCATTGAGGCTCTTAAGACGATGGGTGGCGGCCTACAGGT
CAATGATTTCTACAAGGTGCTCGGGCCTGGATACATTGCAGATGCCTTTC
ATATCGCTCGGGCAGCGGGCCCCGAAGCCAAACTGTTTCTCAGCGAGAGC
CTGGTCGAGACGTATCCCGGTAAGCGTCAAGAGCTCTACGATCTAGTCTC
TGGTCTTGTATCAGACAATGTCCCGATCGACGGCGTCGCTCTACAGATGC
ACGTTACCGAAGCAGCTCCGATTCCCGGGGTGATTACGGATATAGTCAAG
TCCTACAACGCTCTTGGGTTGGAGGTATCCATCTCTGAAATGGATGTCCA
TACGCTTAATACTACCCTCGAAACTGATATCTACAATGCCGTCCTCACCG
AGGCCCTTGGCGCTGGAATTACTGATATCACTTTCTGGGGATTCACCGAT
AAGCACGCTTACACCTGGATCAAGGGCGCGAAGCCATTGATGTTCGACGA
GTACTACAACCCCAAGGGTGAATTCTACGCTACCCACACTGCCTTGACCA
GCTTCGACAACACAACAAGCCCTAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:GH10 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001000 |
| DBxref | PFAM:PF00331 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:365197..366225 + |
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