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KJC3_006764-T1, KJC3_006764-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006764-T1
Unique NameKJC3_006764-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:391218..392239-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006764-T1 ID=KJC3_006764-T1|Name=KJC3_006764-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1022bp|location=Sequence derived from alignment at ch5:391218..392239- (Aspergillus niger KJC3)
GACGAAGTCTCGAGCAAAATGGCTAATATGACAGAGGCTATTCACGATTA
CTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAGAGTTCGA
CCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGT
ATAGCGTCCATCATCATTCGTCGTCCGCGAACACCGGTGACTCAATCAGA
CCAGTTTGCATTTATCTGGATGTGCTTCAGTAAGTCGTGTCATATTCTCT
ACTTCTGCATGGAACAATTATTGACGGAGGAAAATCAGCCGGATGCATAC
ATCTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACCCTAGCCGGC
TCGCACACTTTATTCGGCCAACTCTGGAAGGAATATTCCCTTTCTGACTC
ACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAGCAGTTACCG
CTGTAAGTCCTTATATCCAACACCCTGACACCTAATCAACTCATCATCAA
CTAACTTGTATAGTTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACT
GCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATTGTCTCC
GTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGA
CCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCT
GGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCTGCTGGTTCTTGT
GAGTTTATCAATACCTTGCTGAGTGGGAACTGTGATTGCTAATCATATTG
CAGATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAG
TTAAGCGCAATGGATCGGAAGCGGAAGGACTGTTAGATTTTAAAACCTTA
TCGGGGATGAAGAGTCGTCAACCTATAGTTTAAGTCATGTGAAGTGAATC
CAATTTTGGATTACAGCTTGTGGTTCATGGTTAATTTAGAAAGATAGGAT
AGATCAGGCGATAGTCTTAAGA
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Coding sequence (CDS) from alignment at ch5:391218..392239-

>KJC3_006764-T1 ID=KJC3_006764-T1|Name=KJC3_006764-T1|organism=Aspergillus niger KJC3|type=CDS|length=2772bp|location=Sequence derived from alignment at ch5:391218..392239- (Aspergillus niger KJC3)
ATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTA
AGCGCAATGGATCGGAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCT
CGCATTCCTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATG
TCTTGCAGCTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTAC
TACGCTACGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCG
TCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCATGAACTTTATCT
GGCTTGCTGCTGGTTCTTCCGGATGCATACATCTATTTTTTGAAAGCTAC
TTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCA
ACTCTGGAAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATT
CATTCCTTGTGTCTATGGAAGCAGTTACCGCTATGGCTAATATGACAGAG
GCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAAC
TAACGAGAGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGG
GTTTGGCCCTGGGTATAGCGTCCATCATCATTCGTCGTCCGCGAACACCG
GTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGC
GTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAA
TGGATCGGAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTC
CTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCA
GCTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTA
CGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAG
GGCTACTATTTCTGGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGC
TGCTGGTTCTTCCGGATGCATACATCTATTTTTTGAAAGCTACTTCGTGG
TCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGG
AAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCT
TGTGTCTATGGAAGCAGTTACCGCTATGGCTAATATGACAGAGGCTATTC
ACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG
AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGC
CCTGGGTATAGCGTCCATCATCATTCGTCGTCCGCGAACACCGGTGACTC
AATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGCGTACGAA
AGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCG
GAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTCCTCATTG
CATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATT
GTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCAT
GTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTACT
ATTTCTGGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCTGCTGGT
TCTTCCGGATGCATACATCTATTTTTTGAAAGCTACTTCGTGGTCTACCA
CAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAAT
ATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCT
ATGGAAGCAGTTACCGCTATGGCTAATATGACAGAGGCTATTCACGATTA
CTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAGAGTTCGA
CCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGT
ATAGCGTCCATCATCATTCGTCGTCCGCGAACACCGGTGACTCAATCAGA
CCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGCGTACGAAAGTGCGG
TGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGGAAGCGG
AAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACTG
CATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATTGTCTCCG
TAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGAC
CTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCTG
GTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCTGCTGGTTCTTCCG
GATGCATACATCTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACC
CTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAATATTCCCT
TTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAG
CAGTTACCGCTATGGCTAATATGACAGAGGCTATTCACGATTACTATCCT
TCTACGATCGACTTGCCTCATTATGTAACTAACGAGAGTTCGACCTTTTC
ACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGT
CCATCATCATTCGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTT
GCATTTATCTGGATGTGCTTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0047750cholestenol delta-isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0016125sterol metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006764KJC3_006764Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006764-T1KJC3_006764-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006764-T1.cdsKJC3_006764-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006764-T1.utr3p2KJC3_006764-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_006764-T1.utr3p1KJC3_006764-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006764-T1.exon5KJC3_006764-T1.exon5Aspergillus niger KJC3exon
KJC3_006764-T1.exon4KJC3_006764-T1.exon4Aspergillus niger KJC3exon
KJC3_006764-T1.exon3KJC3_006764-T1.exon3Aspergillus niger KJC3exon
KJC3_006764-T1.exon2KJC3_006764-T1.exon2Aspergillus niger KJC3exon
KJC3_006764-T1.exon1KJC3_006764-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006764-T1.utr5p1KJC3_006764-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR033118
DBxrefInterPro:IPR007905
DBxrefPFAM:PF05241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:391218..392239 -
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