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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:460260..462498- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006792-T1 ID=KJC3_006792-T1|Name=KJC3_006792-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2239bp|location=Sequence derived from alignment at ch5:460260..462498- (Aspergillus niger KJC3)
ATTCAACTCACATTCACTCGCTTTGGCGGGGTGGCGTGTGGTAGTTCGCT
CCGGAAAATTTATTGCTCTTTTGAGACCTCCACAGCCATGGAGACCGCTC
CCCTGACTTTGGTAAGTCTTCTTGCGCGATCTCATGCGTTGTATCCCGCC
TGACAAACCCCTTCGGACAAGGCTCATACCCACGCTCGCAATGCAGTTCT
CGAGACTCGCAAGTCGAACCCCGTAGCAGCCAGCGAGGAACATGACCTCG
CTGCAGGAGAATTTGCCACTGCAGCCCAGAATAGCTCTGATAAAGAGGTA
CGTCTCTTGACGCATTGCTACATCTACACACACTTATACGCTGGCTCATT
TCCTCGACTGCACAGGCTCTACGGACTCTCCACTTGCTCGAACAACATCA
CAAAAAGCTGGCCCAGATCCTCCGCTTTCAACATGAGAATCCCCCAAGCA
ATGCAGACACCGGTGCGAATGCCCAGCTCTCCACGGAATCGGGGGCGAGA
GCATCCCCCTCCACCACTGATCCCCAACATCTCCCGCGGCTATCCGGACA
CCCTCGTCTGCCATCTAGAGAGTCATCCTCCATTGCCAGCAACCTAGCAT
CCGCACGAGGCATTCCCGCGCACCGTGCCTCTCCGGCATCGCCAACAATC
GCTCCTCAGCAAGCCGGAGCCAAGATGACCGACGGACCAAGCAAGGTCCG
AACAAGCGAGTCCCGACTACGAGGTACCGCACAGATGCAAGGGATGAGGG
AGCGTGAGCGTGAGCGCGAGCGCCACCGCACCCCAGCATCCGCCCGACAA
CCTTGGATCCCGCCAACGCCCAGCCCAACCGACATCACCTCGCAGCAGTA
CGCGCCAGCGGAGCCCTCAGAGCCATCCCGCCCACGAGCCTCCCTCACCG
AGGAACCCTTCCAAAAGTTCTACTCCACCTTCGAAGGCCTCATCTCCAAG
ATCTCCGCACCCCTAGCCTTCGCCGGCCTCCCCTTAGGCACCGACCCATC
CTCCACACAAACCTCCACAAGCCGCAAATCTGCCCCGGACACCAAAACCG
ACCGCTACAACGCCGTCCCCGACCGCACCGCCGAACCAGACATCAACAAG
CTTTTCTCCCGCGCCGCCCTTCAAGCCATCAAAGACAACACCGGCGGAGC
GGGCGGCGGAACCGGCAGCGCCGCCGAATCCTTCTACGTGGTTCCCACCA
CTGGCGGCACAGTCTCCTACGCAGGGATCCTGACGCGGGCCGAAAAAGAA
GCCCGAAGAAGCAGTTTCGAGGACGCCGCCGACGAAGACTTCGTCGACGC
CCGCGAGACCCCTCCATCCCCGGAACTCCGCCAAAGCCTCTCCGGAGCAG
CAGCAGCACCGATGGGCAGCAAGGCCGCAGCCCGGAACAACAACACCAGC
CAGAGCGAGAAATTCTCCCGACTCACCCAGAACCCTAAAACCATGGAAGA
GCTACAAATGGAGAACCAAGCCCTCCGCCATCTATCAGATACTCTATCCA
AGCGGCTACACATGTGGGAAGTCAATGCCCAATCCAGCTCCATGGCGCTG
CAACAATCCCTAAGAGCTATGCACCATACTCAGAATGTCCCGTCCCTGGA
CCAACCTCATAACCAATCGCAAGGATCTTCACCAGTCACAACTACTGGTG
GTGGTGGTGTTGGTGCCGGCATCTCCTCACCTCCAGTCCCAGCAACAGAC
TACGACCAGCGCATCAAGGAATTAGAGGAAATGGTCCGTCGCGGCGAGAA
GGAACTTGGTAAAGTTGGCCGCGAGAACGATAAGCTCCGCGATGTGCTGG
GCCGGTATAGAGAGCGGTGGGAGAAGTTGAAGGAGGGGGCGAAGTCGAGA
CGAGCGGGTGCGACTGGTACTGCTGCTGCTGGTGCCACTACTTCTGCTGG
TGCGGCTGGTGTTGCCGGTGCTACTGCTCGGCCAGTTAGCAGTAGTAGAC
GATCGAGTACACAGCAAGGAGTGGCAGATACAGAGGACGGGTCATCAAAA
GCAGGGGGCGGAGAGACGACGACAACAACGGAGAATGCAGACACTTCGAA
TGGTGAGCGGGAGGGGTCTGATTAAGCTTCTGCTTCATCTTTACGACTAT
GTTTATTCTTGGGTTTGTCCGAGGCATTCGTATCTCTATATGAAATACTT
ATATACTATGTCCTGTCATTATTAGCCATAAAAGCAAGCACACGAAGTGA
AACGAGATGAACTGAACTGAAATATATATATACTACCCT back to topCoding sequence (CDS) from alignment at ch5:460260..462498- >KJC3_006792-T1 ID=KJC3_006792-T1|Name=KJC3_006792-T1|organism=Aspergillus niger KJC3|type=CDS|length=5580bp|location=Sequence derived from alignment at ch5:460260..462498- (Aspergillus niger KJC3)
GCTCTACGGACTCTCCACTTGCTCGAACAACATCACAAAAAGCTGGCCCA
GATCCTCCGCTTTCAACATGAGAATCCCCCAAGCAATGCAGACACCGGTG
CGAATGCCCAGCTCTCCACGGAATCGGGGGCGAGAGCATCCCCCTCCACC
ACTGATCCCCAACATCTCCCGCGGCTATCCGGACACCCTCGTCTGCCATC
TAGAGAGTCATCCTCCATTGCCAGCAACCTAGCATCCGCACGAGGCATTC
CCGCGCACCGTGCCTCTCCGGCATCGCCAACAATCGCTCCTCAGCAAGCC
GGAGCCAAGATGACCGACGGACCAAGCAAGGTCCGAACAAGCGAGTCCCG
ACTACGAGGTACCGCACAGATGCAAGGGATGAGGGAGCGTGAGCGTGAGC
GCGAGCGCCACCGCACCCCAGCATCCGCCCGACAACCTTGGATCCCGCCA
ACGCCCAGCCCAACCGACATCACCTCGCAGCAGTACGCGCCAGCGGAGCC
CTCAGAGCCATCCCGCCCACGAGCCTCCCTCACCGAGGAACCCTTCCAAA
AGTTCTACTCCACCTTCGAAGGCCTCATCTCCAAGATCTCCGCACCCCTA
GCCTTCGCCGGCCTCCCCTTAGGCACCGACCCATCCTCCACACAAACCTC
CACAAGCCGCAAATCTGCCCCGGACACCAAAACCGACCGCTACAACGCCG
TCCCCGACCGCACCGCCGAACCAGACATCAACAAGCTTTTCTCCCGCGCC
GCCCTTCAAGCCATCAAAGACAACACCGGCGGAGCGGGCGGCGGAACCGG
CAGCGCCGCCGAATCCTTCTACGTGGTTCCCACCACTGGCGGCACAGTCT
CCTACGCAGGGATCCTGACGCGGGCCGAAAAAGAAGCCCGAAGAAGCAGT
TTCGAGGACGCCGCCGACGAAGACTTCGTCGACGCCCGCGAGACCCCTCC
ATCCCCGGAACTCCGCCAAAGCCTCTCCGGAGCAGCAGCAGCACCGATGG
GCAGCAAGGCCGCAGCCCGGAACAACAACACCAGCCAGAGCGAGAAATTC
TCCCGACTCACCCAGAACCCTAAAACCATGGAAGAGCTACAAATGGAGAA
CCAAGCCCTCCGCCATCTATCAGATACTCTATCCAAGCGGCTACACATGT
GGGAAGTCAATGCCCAATCCAGCTCCATGGCGCTGCAACAATCCCTAAGA
GCTATGCACCATACTCAGAATGTCCCGTCCCTGGACCAACCTCATAACCA
ATCGCAAGGATCTTCACCAGTCACAACTACTGGTGGTGGTGGTGTTGGTG
CCGGCATCTCCTCACCTCCAGTCCCAGCAACAGACTACGACCAGCGCATC
AAGGAATTAGAGGAAATGGTCCGTCGCGGCGAGAAGGAACTTGGTAAAGT
TGGCCGCGAGAACGATAAGCTCCGCGATGTGCTGGGCCGGTATAGAGAGC
GGTGGGAGAAGTTGAAGGAGGGGGCGAAGTCGAGACGAGCGGGTGCGACT
GGTACTGCTGCTGCTGGTGCCACTACTTCTGCTGGTGCGGCTGGTGTTGC
CGGTGCTACTGCTCGGCCAGTTAGCAGTAGTAGACGATCGAGTACACAGC
AAGGAGTGGCAGATACAGAGGACGGGTCATCAAAAGCAGGGGGCGGAGAG
ACGACGACAACAACGGAGAATGCAGACACTTCGAATGGTGAGCGGGAGGG
GTCTGATTAAGCTCATACCCACGCTCGCAATGCAGTTCTCGAGACTCGCA
AGTCGAACCCCGTAGCAGCCAGCGAGGAACATGACCTCGCTGCAGGAGAA
TTTGCCACTGCAGCCCAGAATAGCTCTGATAAAGAGATGGAGACCGCTCC
CCTGACTTTGGCTCTACGGACTCTCCACTTGCTCGAACAACATCACAAAA
AGCTGGCCCAGATCCTCCGCTTTCAACATGAGAATCCCCCAAGCAATGCA
GACACCGGTGCGAATGCCCAGCTCTCCACGGAATCGGGGGCGAGAGCATC
CCCCTCCACCACTGATCCCCAACATCTCCCGCGGCTATCCGGACACCCTC
GTCTGCCATCTAGAGAGTCATCCTCCATTGCCAGCAACCTAGCATCCGCA
CGAGGCATTCCCGCGCACCGTGCCTCTCCGGCATCGCCAACAATCGCTCC
TCAGCAAGCCGGAGCCAAGATGACCGACGGACCAAGCAAGGTCCGAACAA
GCGAGTCCCGACTACGAGGTACCGCACAGATGCAAGGGATGAGGGAGCGT
GAGCGTGAGCGCGAGCGCCACCGCACCCCAGCATCCGCCCGACAACCTTG
GATCCCGCCAACGCCCAGCCCAACCGACATCACCTCGCAGCAGTACGCGC
CAGCGGAGCCCTCAGAGCCATCCCGCCCACGAGCCTCCCTCACCGAGGAA
CCCTTCCAAAAGTTCTACTCCACCTTCGAAGGCCTCATCTCCAAGATCTC
CGCACCCCTAGCCTTCGCCGGCCTCCCCTTAGGCACCGACCCATCCTCCA
CACAAACCTCCACAAGCCGCAAATCTGCCCCGGACACCAAAACCGACCGC
TACAACGCCGTCCCCGACCGCACCGCCGAACCAGACATCAACAAGCTTTT
CTCCCGCGCCGCCCTTCAAGCCATCAAAGACAACACCGGCGGAGCGGGCG
GCGGAACCGGCAGCGCCGCCGAATCCTTCTACGTGGTTCCCACCACTGGC
GGCACAGTCTCCTACGCAGGGATCCTGACGCGGGCCGAAAAAGAAGCCCG
AAGAAGCAGTTTCGAGGACGCCGCCGACGAAGACTTCGTCGACGCCCGCG
AGACCCCTCCATCCCCGGAACTCCGCCAAAGCCTCTCCGGAGCAGCAGCA
GCACCGATGGGCAGCAAGGCCGCAGCCCGGAACAACAACACCAGCCAGAG
CGAGAAATTCTCCCGACTCACCCAGAACCCTAAAACCATGGAAGAGCTAC
AAATGGAGAACCAAGCCCTCCGCCATCTATCAGATACTCTATCCAAGCGG
CTACACATGTGGGAAGTCAATGCCCAATCCAGCTCCATGGCGCTGCAACA
ATCCCTAAGAGCTATGCACCATACTCAGAATGTCCCGTCCCTGGACCAAC
CTCATAACCAATCGCAAGGATCTTCACCAGTCACAACTACTGGTGGTGGT
GGTGTTGGTGCCGGCATCTCCTCACCTCCAGTCCCAGCAACAGACTACGA
CCAGCGCATCAAGGAATTAGAGGAAATGGTCCGTCGCGGCGAGAAGGAAC
TTGGTAAAGTTGGCCGCGAGAACGATAAGCTCCGCGATGTGCTGGGCCGG
TATAGAGAGCGGTGGGAGAAGTTGAAGGAGGGGGCGAAGTCGAGACGAGC
GGGTGCGACTGGTACTGCTGCTGCTGGTGCCACTACTTCTGCTGGTGCGG
CTGGTGTTGCCGGTGCTACTGCTCGGCCAGTTAGCAGTAGTAGACGATCG
AGTACACAGCAAGGAGTGGCAGATACAGAGGACGGGTCATCAAAAGCAGG
GGGCGGAGAGACGACGACAACAACGGAGAATGCAGACACTTCGAATGGTG
AGCGGGAGGGGTCTGATTAAGCTCATACCCACGCTCGCAATGCAGTTCTC
GAGACTCGCAAGTCGAACCCCGTAGCAGCCAGCGAGGAACATGACCTCGC
TGCAGGAGAATTTGCCACTGCAGCCCAGAATAGCTCTGATAAAGAGATGG
AGACCGCTCCCCTGACTTTGGCTCTACGGACTCTCCACTTGCTCGAACAA
CATCACAAAAAGCTGGCCCAGATCCTCCGCTTTCAACATGAGAATCCCCC
AAGCAATGCAGACACCGGTGCGAATGCCCAGCTCTCCACGGAATCGGGGG
CGAGAGCATCCCCCTCCACCACTGATCCCCAACATCTCCCGCGGCTATCC
GGACACCCTCGTCTGCCATCTAGAGAGTCATCCTCCATTGCCAGCAACCT
AGCATCCGCACGAGGCATTCCCGCGCACCGTGCCTCTCCGGCATCGCCAA
CAATCGCTCCTCAGCAAGCCGGAGCCAAGATGACCGACGGACCAAGCAAG
GTCCGAACAAGCGAGTCCCGACTACGAGGTACCGCACAGATGCAAGGGAT
GAGGGAGCGTGAGCGTGAGCGCGAGCGCCACCGCACCCCAGCATCCGCCC
GACAACCTTGGATCCCGCCAACGCCCAGCCCAACCGACATCACCTCGCAG
CAGTACGCGCCAGCGGAGCCCTCAGAGCCATCCCGCCCACGAGCCTCCCT
CACCGAGGAACCCTTCCAAAAGTTCTACTCCACCTTCGAAGGCCTCATCT
CCAAGATCTCCGCACCCCTAGCCTTCGCCGGCCTCCCCTTAGGCACCGAC
CCATCCTCCACACAAACCTCCACAAGCCGCAAATCTGCCCCGGACACCAA
AACCGACCGCTACAACGCCGTCCCCGACCGCACCGCCGAACCAGACATCA
ACAAGCTTTTCTCCCGCGCCGCCCTTCAAGCCATCAAAGACAACACCGGC
GGAGCGGGCGGCGGAACCGGCAGCGCCGCCGAATCCTTCTACGTGGTTCC
CACCACTGGCGGCACAGTCTCCTACGCAGGGATCCTGACGCGGGCCGAAA
AAGAAGCCCGAAGAAGCAGTTTCGAGGACGCCGCCGACGAAGACTTCGTC
GACGCCCGCGAGACCCCTCCATCCCCGGAACTCCGCCAAAGCCTCTCCGG
AGCAGCAGCAGCACCGATGGGCAGCAAGGCCGCAGCCCGGAACAACAACA
CCAGCCAGAGCGAGAAATTCTCCCGACTCACCCAGAACCCTAAAACCATG
GAAGAGCTACAAATGGAGAACCAAGCCCTCCGCCATCTATCAGATACTCT
ATCCAAGCGGCTACACATGTGGGAAGTCAATGCCCAATCCAGCTCCATGG
CGCTGCAACAATCCCTAAGAGCTATGCACCATACTCAGAATGTCCCGTCC
CTGGACCAACCTCATAACCAATCGCAAGGATCTTCACCAGTCACAACTAC
TGGTGGTGGTGGTGTTGGTGCCGGCATCTCCTCACCTCCAGTCCCAGCAA
CAGACTACGACCAGCGCATCAAGGAATTAGAGGAAATGGTCCGTCGCGGC
GAGAAGGAACTTGGTAAAGTTGGCCGCGAGAACGATAAGCTCCGCGATGT
GCTGGGCCGGTATAGAGAGCGGTGGGAGAAGTTGAAGGAGGGGGCGAAGT
CGAGACGAGCGGGTGCGACTGGTACTGCTGCTGCTGGTGCCACTACTTCT
GCTGGTGCGGCTGGTGTTGCCGGTGCTACTGCTCGGCCAGTTAGCAGTAG
TAGACGATCGAGTACACAGCAAGGAGTGGCAGATACAGAGGACGGGTCAT
CAAAAGCAGGGGGCGGAGAGACGACGACAACAACGGAGAATGCAGACACT
TCGAATGGTGAGCGGGAGGGGTCTGATTAAGCTCATACCCACGCTCGCAA
TGCAGTTCTCGAGACTCGCAAGTCGAACCCCGTAGCAGCCAGCGAGGAAC
ATGACCTCGCTGCAGGAGAATTTGCCACTGCAGCCCAGAATAGCTCTGAT
AAAGAGATGGAGACCGCTCCCCTGACTTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006792-T1.utr3p1 | KJC3_006792-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006792-T1.utr5p1 | KJC3_006792-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:460260..462498 - |
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