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KJC3_006811-T1, KJC3_006811-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006811-T1
Unique NameKJC3_006811-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:526202..528552-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006811-T1 ID=KJC3_006811-T1|Name=KJC3_006811-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2351bp|location=Sequence derived from alignment at ch5:526202..528552- (Aspergillus niger KJC3)
CGTAACCTCCGAAGTCCATCCCGTTCCGCTCAGTTGAACAGTTTCCCCTC
CCCCATCTCAACGCTTGCATCTGCCTCTCCTTTAGTCAAGCCCGAATTCT
TGAGAGTTTTCGGCATCTTCCTCTCCTCAATTGTTTTTGAGCACTATTAG
GTGAACACCAATTGATCCACAATGATAACCGTCCCGGACGAGACAATACT
GATGATTGCGCACCCGCAGCGCGGTGTAGACGTGGTCCCATTAGACCAAG
ACAGCCACGATGGACTATTCCGCCATATCAAACGATCCTGATCATCCTGC
GGGTACTTCTCCATGGGCTTCACCTCGCCCGACCCAAACAACCTTTCCGG
CTTCCGTGACTAGCGACATCCCCCCTGCCCCCTTGCCTCCCCAAGATCCC
TACAATGCCGAATCGCAGCCTACCGAAACTCCTGGGTTCCAGGAGAACGA
GATTGGATCGCCCGACTTGTCTGCGCGACTGCAGGGTGCACAACTGGGTG
AGCCGGGCTATGTTGATGAGCACTCGCAACACACTCAGCAGCAGCATGGA
CAACAGCCTCGCTCTCAGCTCCCCGCCCGCTACCAAACGGGCCCAAGACA
GAATCCCAGACAACCCGCACCTGTGTATAGAATCCAGGCGAAAGTCACGG
GGCTAGAGAGAACGGGCAAGAAGGACCCTATTCTTCGATTTGATGTTCAC
GTGAGCGATATCCTTTTCTTGCCTCGCCCTGCGCCTACTGATTACAGGCT
CCAGACGAATATCCCCAAGTTTAGGACAACACAGTATCGAGACGTTCGTC
GTACCCATGCCGAGTTTGTCAAGCTTGCGGACCATCTGATTTCGGCTAAC
CCGGAAGCGTTGGTTCCTGCGGTCCCCCCACCACTTACCCCTGCCGGCGC
TGGAACCGAAGAGGATGAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGT
TGAATGTTGTATTGAGCAATGAAGTTCTCATCCATGACGACGAGGTGGTC
CTGTTCGTTGAGAGTGATTTCGGTTACAGTCCTGTAGTTCGGATGAAACA
ACCTGCGACTGGGGTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCC
CCGATGACACACCCGAATTACAAAATGCGCGTCCGATTGTAAAGATGTTC
TATCTTGGAACAATGGATACTAGTCACAAGGTTGATCGTGTCGTCAAGGC
CCGTCGAGGTATGCACCAGGGATTCGTATCTCATGATCATGGGAACTAAC
ATTGGGCTATCCAGGACTCGGTCTCGCAGAATCCGACTTTGGTGTCAAGC
TAGGCCAGATGCACGTGCAAGAGACGCACCCTGGACTGTCAAATGCATAC
CGGAAATTGGGAAAGATCATCCAAACGGTCGGGGATTTCCATGCCGTCCA
GGCGACTGCGGAGGCCACAACACTGGGGGATCCGCTAAGCTACCACTCGT
CCGATGCCTTTATTGTCAAGGAGACTCTTACAAATCGCCACATCCTCCTT
CGTGATTTGATCCAAGCTCAACAGGCAACACGGAGCAAACGCGCCGCCGC
TGATCGCCTCAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGG
CCATCAATGCCCTGGATGAGGCTCAGGGCCACGAGGACTACCTGACGAAG
CGAACACAGCGGGTTACATCGAACTTACTCGCCGAGAAGCAACGTTGGTT
TGACCGGACGACTAACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGC
GCCAGATTGAATCCGAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGA
CCTGATATTCGAGCCATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACG
TGAATCCCACCCAACCGCTCGCCGACCTAATCTTGGTTCAAGCCAAGGCC
CCAAAGGGGATGCTTGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGC
CGGAGTCTCAGTGGCAGTTTCGTTGCACCCACCCCAACTGAAGACGACGA
AGAAGTCAACGGACACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTG
GTGTGAGCTCGATTGTGGAGGAAGACGACGATGATCGCCTTGACGCTCGT
AACGCGGCTAGTCGCCTGGCCACGAGCACTTTCTAAGCGACTGTAGATTA
TAGGCATGATTCTGTGCAAGATTCCCCTTTGATGCCGGTTTTCTATTGAA
ATAAGCCACCTTTGAGTTTTGCAATCCAGCCACTCTGCTTTATCTTTTCT
GCTGTACCATTCCCTTGAACTTTGTCGTTCAAGAAGAGTATATGTACGTC
TACTTTATACAAAAACTGTAGCCTCTCGGTTATACTTCCACATTGTCACC
C
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Coding sequence (CDS) from alignment at ch5:526202..528552-

>KJC3_006811-T1 ID=KJC3_006811-T1|Name=KJC3_006811-T1|organism=Aspergillus niger KJC3|type=CDS|length=5301bp|location=Sequence derived from alignment at ch5:526202..528552- (Aspergillus niger KJC3)
GACTCGGTCTCGCAGAATCCGACTTTGGTGTCAAGCTAGGCCAGATGCAC
GTGCAAGAGACGCACCCTGGACTGTCAAATGCATACCGGAAATTGGGAAA
GATCATCCAAACGGTCGGGGATTTCCATGCCGTCCAGGCGACTGCGGAGG
CCACAACACTGGGGGATCCGCTAAGCTACCACTCGTCCGATGCCTTTATT
GTCAAGGAGACTCTTACAAATCGCCACATCCTCCTTCGTGATTTGATCCA
AGCTCAACAGGCAACACGGAGCAAACGCGCCGCCGCTGATCGCCTCAAAG
TCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGGCCATCAATGCCCTG
GATGAGGCTCAGGGCCACGAGGACTACCTGACGAAGCGAACACAGCGGGT
TACATCGAACTTACTCGCCGAGAAGCAACGTTGGTTTGACCGGACGACTA
ACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGCGCCAGATTGAATCC
GAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGACCTGATATTCGAGC
CATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACGTGAATCCCACCCAA
CCGCTCGCCGACCTAATCTTGGTTCAAGCCAAGGCCCCAAAGGGGATGCT
TGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGCCGGAGTCTCAGTGG
CAGTTTCGTTGCACCCACCCCAACTGAAGACGACGAAGAAGTCAACGGAC
ACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGTGTGAGCTCGATT
GTGGAGGAAGACGACGATGATCGCCTTGACGCTCGTAACGCGGCTAGTCG
CCTGGCCACGAGCACTTTCTAAACGAATATCCCCAAGTTTAGGACAACAC
AGTATCGAGACGTTCGTCGTACCCATGCCGAGTTTGTCAAGCTTGCGGAC
CATCTGATTTCGGCTAACCCGGAAGCGTTGGTTCCTGCGGTCCCCCCACC
ACTTACCCCTGCCGGCGCTGGAACCGAAGAGGATGAAATCAGAGTCAAGT
CGTCTTTGCAACGGTGGTTGAATGTTGTATTGAGCAATGAAGTTCTCATC
CATGACGACGAGGTGGTCCTGTTCGTTGAGAGTGATTTCGGTTACAGTCC
TGTAGTTCGGATGAAACAACCTGCGACTGGGGTTCGAAGGAAGGTCTTGA
AGCAGTTCGCGCCACCCCCCGATGACACACCCGAATTACAAAATGCGCGT
CCGATTGTAAAGATGTTCTATCTTGGAACAATGGATACTAGTCACAAGGT
TGATCGTGTCGTCAAGGCCCGTCGAGATGGACTATTCCGCCATATCAAAC
GATCCTGATCATCCTGCGGGTACTTCTCCATGGGCTTCACCTCGCCCGAC
CCAAACAACCTTTCCGGCTTCCGTGACTAGCGACATCCCCCCTGCCCCCT
TGCCTCCCCAAGATCCCTACAATGCCGAATCGCAGCCTACCGAAACTCCT
GGGTTCCAGGAGAACGAGATTGGATCGCCCGACTTGTCTGCGCGACTGCA
GGGTGCACAACTGGGTGAGCCGGGCTATGTTGATGAGCACTCGCAACACA
CTCAGCAGCAGCATGGACAACAGCCTCGCTCTCAGCTCCCCGCCCGCTAC
CAAACGGGCCCAAGACAGAATCCCAGACAACCCGCACCTGTGTATAGAAT
CCAGGCGAAAGTCACGGGGCTAGAGAGAACGGGCAAGAAGGACCCTATTC
TTCGATTTGATGTTCACGACTCGGTCTCGCAGAATCCGACTTTGGTGTCA
AGCTAGGCCAGATGCACGTGCAAGAGACGCACCCTGGACTGTCAAATGCA
TACCGGAAATTGGGAAAGATCATCCAAACGGTCGGGGATTTCCATGCCGT
CCAGGCGACTGCGGAGGCCACAACACTGGGGGATCCGCTAAGCTACCACT
CGTCCGATGCCTTTATTGTCAAGGAGACTCTTACAAATCGCCACATCCTC
CTTCGTGATTTGATCCAAGCTCAACAGGCAACACGGAGCAAACGCGCCGC
CGCTGATCGCCTCAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTGGACG
AGGCCATCAATGCCCTGGATGAGGCTCAGGGCCACGAGGACTACCTGACG
AAGCGAACACAGCGGGTTACATCGAACTTACTCGCCGAGAAGCAACGTTG
GTTTGACCGGACGACTAACGACATGCTGGCCAGCCTCCGCGAGTATACGC
TGCGCCAGATTGAATCCGAACGGAGGACCCTCGCTACCTTGGAGAGTGTG
CGACCTGATATTCGAGCCATTGACGCTTCGGGAGGACTCAGCCGTCTAGG
ACGTGAATCCCACCCAACCGCTCGCCGACCTAATCTTGGTTCAAGCCAAG
GCCCCAAAGGGGATGCTTGGAGCGGCATACCGCGTCGCAGCGACAGCCTT
GGCCGGAGTCTCAGTGGCAGTTTCGTTGCACCCACCCCAACTGAAGACGA
CGAAGAAGTCAACGGACACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCA
GTGGTGTGAGCTCGATTGTGGAGGAAGACGACGATGATCGCCTTGACGCT
CGTAACGCGGCTAGTCGCCTGGCCACGAGCACTTTCTAAACGAATATCCC
CAAGTTTAGGACAACACAGTATCGAGACGTTCGTCGTACCCATGCCGAGT
TTGTCAAGCTTGCGGACCATCTGATTTCGGCTAACCCGGAAGCGTTGGTT
CCTGCGGTCCCCCCACCACTTACCCCTGCCGGCGCTGGAACCGAAGAGGA
TGAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGTTGAATGTTGTATTGA
GCAATGAAGTTCTCATCCATGACGACGAGGTGGTCCTGTTCGTTGAGAGT
GATTTCGGTTACAGTCCTGTAGTTCGGATGAAACAACCTGCGACTGGGGT
TCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCCCCGATGACACACCCG
AATTACAAAATGCGCGTCCGATTGTAAAGATGTTCTATCTTGGAACAATG
GATACTAGTCACAAGGTTGATCGTGTCGTCAAGGCCCGTCGAGATGGACT
ATTCCGCCATATCAAACGATCCTGATCATCCTGCGGGTACTTCTCCATGG
GCTTCACCTCGCCCGACCCAAACAACCTTTCCGGCTTCCGTGACTAGCGA
CATCCCCCCTGCCCCCTTGCCTCCCCAAGATCCCTACAATGCCGAATCGC
AGCCTACCGAAACTCCTGGGTTCCAGGAGAACGAGATTGGATCGCCCGAC
TTGTCTGCGCGACTGCAGGGTGCACAACTGGGTGAGCCGGGCTATGTTGA
TGAGCACTCGCAACACACTCAGCAGCAGCATGGACAACAGCCTCGCTCTC
AGCTCCCCGCCCGCTACCAAACGGGCCCAAGACAGAATCCCAGACAACCC
GCACCTGTGTATAGAATCCAGGCGAAAGTCACGGGGCTAGAGAGAACGGG
CAAGAAGGACCCTATTCTTCGATTTGATGTTCACGACTCGGTCTCGCAGA
ATCCGACTTTGGTGTCAAGCTAGGCCAGATGCACGTGCAAGAGACGCACC
CTGGACTGTCAAATGCATACCGGAAATTGGGAAAGATCATCCAAACGGTC
GGGGATTTCCATGCCGTCCAGGCGACTGCGGAGGCCACAACACTGGGGGA
TCCGCTAAGCTACCACTCGTCCGATGCCTTTATTGTCAAGGAGACTCTTA
CAAATCGCCACATCCTCCTTCGTGATTTGATCCAAGCTCAACAGGCAACA
CGGAGCAAACGCGCCGCCGCTGATCGCCTCAAAGTCAGTTCCTCCGTCCG
CCCGGACAAGGTGGACGAGGCCATCAATGCCCTGGATGAGGCTCAGGGCC
ACGAGGACTACCTGACGAAGCGAACACAGCGGGTTACATCGAACTTACTC
GCCGAGAAGCAACGTTGGTTTGACCGGACGACTAACGACATGCTGGCCAG
CCTCCGCGAGTATACGCTGCGCCAGATTGAATCCGAACGGAGGACCCTCG
CTACCTTGGAGAGTGTGCGACCTGATATTCGAGCCATTGACGCTTCGGGA
GGACTCAGCCGTCTAGGACGTGAATCCCACCCAACCGCTCGCCGACCTAA
TCTTGGTTCAAGCCAAGGCCCCAAAGGGGATGCTTGGAGCGGCATACCGC
GTCGCAGCGACAGCCTTGGCCGGAGTCTCAGTGGCAGTTTCGTTGCACCC
ACCCCAACTGAAGACGACGAAGAAGTCAACGGACACGGCACCGGTAAAGG
GCGCCTGCGCTCTGCCAGTGGTGTGAGCTCGATTGTGGAGGAAGACGACG
ATGATCGCCTTGACGCTCGTAACGCGGCTAGTCGCCTGGCCACGAGCACT
TTCTAAACGAATATCCCCAAGTTTAGGACAACACAGTATCGAGACGTTCG
TCGTACCCATGCCGAGTTTGTCAAGCTTGCGGACCATCTGATTTCGGCTA
ACCCGGAAGCGTTGGTTCCTGCGGTCCCCCCACCACTTACCCCTGCCGGC
GCTGGAACCGAAGAGGATGAAATCAGAGTCAAGTCGTCTTTGCAACGGTG
GTTGAATGTTGTATTGAGCAATGAAGTTCTCATCCATGACGACGAGGTGG
TCCTGTTCGTTGAGAGTGATTTCGGTTACAGTCCTGTAGTTCGGATGAAA
CAACCTGCGACTGGGGTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACC
CCCCGATGACACACCCGAATTACAAAATGCGCGTCCGATTGTAAAGATGT
TCTATCTTGGAACAATGGATACTAGTCACAAGGTTGATCGTGTCGTCAAG
GCCCGTCGAGATGGACTATTCCGCCATATCAAACGATCCTGATCATCCTG
CGGGTACTTCTCCATGGGCTTCACCTCGCCCGACCCAAACAACCTTTCCG
GCTTCCGTGACTAGCGACATCCCCCCTGCCCCCTTGCCTCCCCAAGATCC
CTACAATGCCGAATCGCAGCCTACCGAAACTCCTGGGTTCCAGGAGAACG
AGATTGGATCGCCCGACTTGTCTGCGCGACTGCAGGGTGCACAACTGGGT
GAGCCGGGCTATGTTGATGAGCACTCGCAACACACTCAGCAGCAGCATGG
ACAACAGCCTCGCTCTCAGCTCCCCGCCCGCTACCAAACGGGCCCAAGAC
AGAATCCCAGACAACCCGCACCTGTGTATAGAATCCAGGCGAAAGTCACG
GGGCTAGAGAGAACGGGCAAGAAGGACCCTATTCTTCGATTTGATGTTCA
C
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030904retromer complex
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0042147retrograde transport, endosome to Golgi
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006811KJC3_006811Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006811-T1KJC3_006811-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006811-T1.cdsKJC3_006811-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006811-T1.utr3p1KJC3_006811-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006811-T1.exon4KJC3_006811-T1.exon4Aspergillus niger KJC3exon
KJC3_006811-T1.exon3KJC3_006811-T1.exon3Aspergillus niger KJC3exon
KJC3_006811-T1.exon2KJC3_006811-T1.exon2Aspergillus niger KJC3exon
KJC3_006811-T1.exon1KJC3_006811-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006811-T1.utr5p2KJC3_006811-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006811-T1.utr5p1KJC3_006811-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261IEH
DBxrefInterPro:IPR037907
DBxrefInterPro:IPR036871
DBxrefInterPro:IPR015404
DBxrefInterPro:IPR014461
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR001683
DBxrefPFAM:PF09325
DBxrefPFAM:PF00787
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:526202..528552 -
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