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KJC3_006812-T1, KJC3_006812-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006812-T1
Unique NameKJC3_006812-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:528674..531708+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006812-T1 ID=KJC3_006812-T1|Name=KJC3_006812-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3035bp|location=Sequence derived from alignment at ch5:528674..531708+ (Aspergillus niger KJC3)
GCTGGGCCTTTCTCTTTTCTACAATTATCATCCTTCTCTCTGTTCTTCTT
GAGGATGTATGTCAAGTTCTAGGCCCCATATTCCGCCAATTCATTGTCTC
CGATTACATAGACAGTTGCCGTCCCCATGGTTACAGCTCTTTTCTTGCGC
GCCTCTCACCAGACGGTGCGGCCAACTGGCCTCCGGCAATGCCAGGCAGC
TGCCAGCCGTCTGGGGTGTAATGCGTCCTTGATTCCAGGGGTCAAGAAGG
GGCAATTTCCTAAGATCCAGATGCTCTCAACGTCTGCATCCAAATTGCAG
GCAGACACCCTTGACCGAACTAGAAATATAGGTATCATCGCACATATTGA
TGCCGGTAAAACAACGACCACTGAGCGCATGCTCTACTATAGTGGCTTTA
CCCGAAGAATTGGAGATGTGGACGAAGGGTCCACCGTCACAGACTTTCTC
CCTGCGGAACGCGCTCGCGGGATCACAATTCAATCTGCTGCCATCACCTT
CCATTGGCCGCCTCAAGCGGCTGGTGATCAAACTACAACCCTTCAAGATA
ATCCGCAAACCCCAAGGTCTGCCACTTCCCATACAGTAAATCTAATCGAC
ACTCCTGGGCATGCCGACTTTACCTTTGAGGTTATGCGTTCTTTGCGCAT
CCTAGACGGGGCGGTGTGTATTCTGGACGGCGTCGCTGGCGTCGAAGCTC
AAACGGAGCGAGTATGGCACCAAGCGAGCACATATCGTATTCCCAGGATT
GTCTACATTAACAAGCTGGACAGAGACGGTGCAGCTTTTGGGCGTACGGT
AAGAGAGATAAGCTCCCGGCTTGCGGGCTACCCCGCTGTCTGCCAGGTCC
CATGGTTCGAGGGCGGAAATGGTCGCTTTGTTGGAGTTGGCGATGCGATC
AACTTGCAGGGTCTCCGCTGGCAAGATGGGGACGGTAAAGCGGTCAAAAT
GTTCAACCTCCAGGAGCTGGACGGCGAGGAACCGGGGCTTGCACAGGAGA
TCAGACGCGCAAGGACAGCACTTGTCGAGCTGCTTAGCGAGCATGATGAG
ACTATGATTGAGAAGTTCTTTGAGCATGACGAAGACCATCTCGCAGTGCC
TCCCAACGACATTCTAGACAGCTTGCGCCGGTGCCTCTTGCAAGAACAGG
GTAGGAAGATTGTCCCCATCTTCGCAGGCGCTAGCTTCCGCAACATCGGT
GTCCAGCCTCTCCTTGACGCCGTGACGAACCTCCTTCCTAGTCCCCTCGA
AACCCCTGACCCAGAGGTGAGCATCGGCGGCGTCAGCGGAGGTCTTCGGA
GCCTCCTCTCCGGTGATCTATTGGTTGAACAGAGCGAAAAAGCAGCCACC
TCCAAAGGGAAGCAAAAAAAGAAGAAGTCTGTCACTCAAGCTGAATCACA
AAATGCTATCGAGAAGCTTCAGAGCTGTGCGCTTGCTTTTAAGGTAGTCA
ACGATGCCAAGCGGGGAGTCTTGGTTTATGTGCGCGTGTACTCAGGTTCT
CTGGACCGAAACAGCGCTATATTCAACACCAATCTCAAGATCACTGAACG
TGCACCGCGCTTACTGAAAATGTACGCCAATGATGCTGTCGAGGTGGATT
CCATCCCTGAGGGACACATTGGCGTTGTGGCTGGCCTGAAGCATGCTCGA
ACTGGAGATACACTAGTCTCATATGCGGGCAACAAATTAACACCACCAGA
ACCACTTGACACCCTCCAACTACGTCCTATCCAGGTGCCGCCCCCCGTTT
TCTTCGCCAGTATCGAGCCGCACAGCCTAAGCGAGGAGAAGAAGATCCAT
GAATGCCTGGCCCTACTCCTACGTGAAGACCCAAGTCTTCACGTCACTGT
TGACGAAGACTCTGGGCAAACACTCCTAAGCGGCATGGGCGAGCTCCATC
TCGAGATTGCCCGAGACCGCCTGATCAACGACCTCAAAGCCAAGGCCACA
ATGGGCCGCATTGAAATCGGCTACCGTGAATGTCCGCTCGGAGAGTCGCC
TGTTGTCACCAAAATGTTCGACAAAGAGATCGCCGGCCGCAAAGGCAAAG
CCGGCTGCACAGCAGTAGTGGAACCTTTCGACCCGGATAACGCACCTCCA
GTACCCGAAGACGCGCTCTCAGTTGAGACCAAAGAGGGCAATCAGATAAT
CATCATCGCCCCGGAACTGCAGGTAGAAACCAACCGCAAAGGCATCGAGG
AAAGCCCCGTACTTCCCCCAGGCCTAGATATGCAATCCTTCCGCGCCTCC
CTCCAAAACGGCTGCCTTGCTGCCCTTGCTCGCGGCCCTCAGTTCACTTT
CCCTATGCACCACACCCGCGTCACCGTCACCATCAACCCAACCGAACACC
TCTTCGGCACCGATACCACCCCGGCCGCCCTCTCCTCCGCAGCACGTCTA
GCCACCTCCGCCGCTCTCCGCGACCTCCTCTCGTCCGGCCCAGGCACCTC
CCTAATGGAACCCGTTATGAACGTCATCATCAGCATCGACGAAGCCAGTC
TCGGAGCCGTCGTACACGACATTTCTTCCTCGCGCGGCGGCCACATCGTC
TCCCTGGACGAAGAAATCCCCCTCACATCAACCGACCTCTCCGCGTCCCC
GCAACCGGTCGAGGACCTCCCACCCATCGACCCGAAGAAGGTCTACGCCC
CCGCGGACCCATTCGAGTCTGGTTCTGTTGGTGCCTCCCTTCCCGACACA
GCTAACCGGCCTAGAACCATCACGGCAAAGGTACCACTCAAGGAAATGGT
CGGGTACTTGAAGCACCTGCGCAGTCTGAGTGCCGGCCGCGGTACTTTTG
TGATGAGTGTCGATCGGTTCGAGAAGATGAGTACCCCGCGACAGAAGGCT
GTGTTGACGGAGCTGAGGGGTGGGTTTTAGCAAGGTTGATTTTCACTACC
TTCTTTCTCCCCATTCTTCTACTATATCACATCTCTCCCTGGATACGCTG
TATATTATAAAATCATGGGTTGGTCAAAGCTTAGATAGGATTTCGAAGTG
TGTACAATACATCTTGACATCCAGGAAAGACTGGC
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Coding sequence (CDS) from alignment at ch5:528674..531708+

>KJC3_006812-T1 ID=KJC3_006812-T1|Name=KJC3_006812-T1|organism=Aspergillus niger KJC3|type=CDS|length=2754bp|location=Sequence derived from alignment at ch5:528674..531708+ (Aspergillus niger KJC3)
ATGGTTACAGCTCTTTTCTTGCGCGCCTCTCACCAGACGGTGCGGCCAAC
TGGCCTCCGGCAATGCCAGGCAGCTGCCAGCCGTCTGGGGTGTAATGCGT
CCTTGATTCCAGGGGTCAAGAAGGGGCAATTTCCTAAGATCCAGATGCTC
TCAACGTCTGCATCCAAATTGCAGGCAGACACCCTTGACCGAACTAGAAA
TATAGGTATCATCGCACATATTGATGCCGGTAAAACAACGACCACTGAGC
GCATGCTCTACTATAGTGGCTTTACCCGAAGAATTGGAGATGTGGACGAA
GGGTCCACCGTCACAGACTTTCTCCCTGCGGAACGCGCTCGCGGGATCAC
AATTCAATCTGCTGCCATCACCTTCCATTGGCCGCCTCAAGCGGCTGGTG
ATCAAACTACAACCCTTCAAGATAATCCGCAAACCCCAAGGTCTGCCACT
TCCCATACAGTAAATCTAATCGACACTCCTGGGCATGCCGACTTTACCTT
TGAGGTTATGCGTTCTTTGCGCATCCTAGACGGGGCGGTGTGTATTCTGG
ACGGCGTCGCTGGCGTCGAAGCTCAAACGGAGCGAGTATGGCACCAAGCG
AGCACATATCGTATTCCCAGGATTGTCTACATTAACAAGCTGGACAGAGA
CGGTGCAGCTTTTGGGCGTACGGTAAGAGAGATAAGCTCCCGGCTTGCGG
GCTACCCCGCTGTCTGCCAGGTCCCATGGTTCGAGGGCGGAAATGGTCGC
TTTGTTGGAGTTGGCGATGCGATCAACTTGCAGGGTCTCCGCTGGCAAGA
TGGGGACGGTAAAGCGGTCAAAATGTTCAACCTCCAGGAGCTGGACGGCG
AGGAACCGGGGCTTGCACAGGAGATCAGACGCGCAAGGACAGCACTTGTC
GAGCTGCTTAGCGAGCATGATGAGACTATGATTGAGAAGTTCTTTGAGCA
TGACGAAGACCATCTCGCAGTGCCTCCCAACGACATTCTAGACAGCTTGC
GCCGGTGCCTCTTGCAAGAACAGGGTAGGAAGATTGTCCCCATCTTCGCA
GGCGCTAGCTTCCGCAACATCGGTGTCCAGCCTCTCCTTGACGCCGTGAC
GAACCTCCTTCCTAGTCCCCTCGAAACCCCTGACCCAGAGGTGAGCATCG
GCGGCGTCAGCGGAGGTCTTCGGAGCCTCCTCTCCGGTGATCTATTGGTT
GAACAGAGCGAAAAAGCAGCCACCTCCAAAGGGAAGCAAAAAAAGAAGAA
GTCTGTCACTCAAGCTGAATCACAAAATGCTATCGAGAAGCTTCAGAGCT
GTGCGCTTGCTTTTAAGGTAGTCAACGATGCCAAGCGGGGAGTCTTGGTT
TATGTGCGCGTGTACTCAGGTTCTCTGGACCGAAACAGCGCTATATTCAA
CACCAATCTCAAGATCACTGAACGTGCACCGCGCTTACTGAAAATGTACG
CCAATGATGCTGTCGAGGTGGATTCCATCCCTGAGGGACACATTGGCGTT
GTGGCTGGCCTGAAGCATGCTCGAACTGGAGATACACTAGTCTCATATGC
GGGCAACAAATTAACACCACCAGAACCACTTGACACCCTCCAACTACGTC
CTATCCAGGTGCCGCCCCCCGTTTTCTTCGCCAGTATCGAGCCGCACAGC
CTAAGCGAGGAGAAGAAGATCCATGAATGCCTGGCCCTACTCCTACGTGA
AGACCCAAGTCTTCACGTCACTGTTGACGAAGACTCTGGGCAAACACTCC
TAAGCGGCATGGGCGAGCTCCATCTCGAGATTGCCCGAGACCGCCTGATC
AACGACCTCAAAGCCAAGGCCACAATGGGCCGCATTGAAATCGGCTACCG
TGAATGTCCGCTCGGAGAGTCGCCTGTTGTCACCAAAATGTTCGACAAAG
AGATCGCCGGCCGCAAAGGCAAAGCCGGCTGCACAGCAGTAGTGGAACCT
TTCGACCCGGATAACGCACCTCCAGTACCCGAAGACGCGCTCTCAGTTGA
GACCAAAGAGGGCAATCAGATAATCATCATCGCCCCGGAACTGCAGGTAG
AAACCAACCGCAAAGGCATCGAGGAAAGCCCCGTACTTCCCCCAGGCCTA
GATATGCAATCCTTCCGCGCCTCCCTCCAAAACGGCTGCCTTGCTGCCCT
TGCTCGCGGCCCTCAGTTCACTTTCCCTATGCACCACACCCGCGTCACCG
TCACCATCAACCCAACCGAACACCTCTTCGGCACCGATACCACCCCGGCC
GCCCTCTCCTCCGCAGCACGTCTAGCCACCTCCGCCGCTCTCCGCGACCT
CCTCTCGTCCGGCCCAGGCACCTCCCTAATGGAACCCGTTATGAACGTCA
TCATCAGCATCGACGAAGCCAGTCTCGGAGCCGTCGTACACGACATTTCT
TCCTCGCGCGGCGGCCACATCGTCTCCCTGGACGAAGAAATCCCCCTCAC
ATCAACCGACCTCTCCGCGTCCCCGCAACCGGTCGAGGACCTCCCACCCA
TCGACCCGAAGAAGGTCTACGCCCCCGCGGACCCATTCGAGTCTGGTTCT
GTTGGTGCCTCCCTTCCCGACACAGCTAACCGGCCTAGAACCATCACGGC
AAAGGTACCACTCAAGGAAATGGTCGGGTACTTGAAGCACCTGCGCAGTC
TGAGTGCCGGCCGCGGTACTTTTGTGATGAGTGTCGATCGGTTCGAGAAG
ATGAGTACCCCGCGACAGAAGGCTGTGTTGACGGAGCTGAGGGGTGGGTT
TTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0032790ribosome disassembly
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MEF2KJC3_006812Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006812-T1.utr5p1KJC3_006812-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006812-T1.exon1KJC3_006812-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006812-T1.cdsKJC3_006812-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006812-T1.utr3p1KJC3_006812-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006812-T1KJC3_006812-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR035647
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009022
DBxrefInterPro:IPR035649
DBxrefInterPro:IPR030851
DBxrefInterPro:IPR031157
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR041095
DBxrefInterPro:IPR000640
DBxrefInterPro:IPR000795
DBxrefPFAM:PF00009
DBxrefPFAM:PF14492
DBxrefPFAM:PF00679
Product mitochondrial
ProductRibosome-releasing factor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:528674..531708 +
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