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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:556058..558002- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006823-T1 ID=KJC3_006823-T1|Name=KJC3_006823-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1945bp|location=Sequence derived from alignment at ch5:556058..558002- (Aspergillus niger KJC3)
ACGCTTTTCAAACTACACCTCCACACAACTCCGACAACGGCCGATGGTCA
CCCCAACTATTGGACCCCAAGCCGGACTCCGAAGATAAAGCAGATAAGAT
CGGGGCTAGGCCGTTATCCACCTATCGACCCCATCTATGTTGGGGCGGGA
TAAACGGCTAAAACGTTGGGCGATCGACTCATGTATATATTGCGGTGAGA
GCCGACTGAACATGATTGTAGTAAACATCTCTCAGACTCACACATCTTAT
TCGAATACCACTGTAAACACATCACCATGGGCTCCAACACAGCAACCAAC
ACCATGCTCCCCCCGGACAACCCCATCACTCCCTTCTGGCGCACCCAACT
CGACCCGCTCGACGACATCCGGAGCACCCCCGACCTGCCCCCGCAAAGCG
ACATCGTAATCATCGGCTGCGGCTACTCAGGCGTCACGCTAGCTTACTAT
CTCCTCAAGCAGCTCTCTGAGCAGGGGGACAAGTCTACCAGTATTATGCT
CCTCGAAGCGAGGCAGATTTGCTCGGGCGCGACAGGTCGAAATGGTATAC
TCCCTGTTCATGTCTGAACGTGCCACATATCAGTCAGAACACCATGTTAA
CCGTGAAAGTGAAGGCGGCCACCTCCGCCCGGATATCTACGGCCACATCC
CAACCTACATCGAGCGCTCCGGACTAGAAGCGGGTCTGGAGATCGCCGAA
TTCGAATACGCGCATATCCAGGCGTTAAAAGATCTTCTTCGCGAGGAGAA
TATCGATTGTGATTTGAACATTACCCGGAACATGAATGTGTATTTGGATG
AAGAGTCGGCGGAGAAAGCCAAGCTTGCGTATGAGATGTTGCAGGCGAGG
GGGGTCAAGCTGGCCGAGGATTTGCATTATACGGGGAAAAGGGATGCGGA
GGTGGTGAGTATATATCCTCTTTCATTATACATTTACCACTTCCAAACGA
ACGATAAAGAAGAGATTCTAATGAAGATACAGATATCAGGCGCCCATAAC
GCCAAAGCCTGCATCTCCTACACATCGGGCACTCTCTGGCCCTACAAATT
CATCCTCGGCCTACTGAGCAAAATCATAAAATCCCCACAATTGAACGTCC
AAACTTACACCCCAGTGACATCCATCACCTCAGAAGACAACATCAACATA
ATCTCCACTCCCCGCGGCTCTCTCCGCGCCCGCAAAATCGTCTACGCGAC
GAACGCCTACACGGCCGGCTTACTCCCCGAGTACTCGGCCAATATTATTC
CCTGCAAGGGAATATGCTGCCATATTACAGTCCCCGAGGGAGAGGGCAAG
AAGCCCGCTCCGTTCCTCCCCTACTCGTATGCAATCGGGTACGGATCTGA
CGTTGTCGGCGGGGGCAGCTATTTAATTTCCAGACCGGATGGGAGTATTA
TAGTGGGTGGTGCGCAAGCGACATTCAAAGACAAGCGGGAGGAATGGTAT
GGAGTTGTGGATGATACGACGTTAATTGAGTCTGCAAAGAGTTACTATGA
TGGGTATATGCAGCGGACATTTAGGGGGTGGGAGGATAGTGGGGCGTATG
TGAAGGAGATTTGGACGGGTGGTGAGTATTATTCATCTTCGTTCTCCTTT
GTATTTTCTATTTAAATTGAGGAATGGCTGGTACTGATTTGATGACAGTT
ATGGGCTACTCGTCCGACTCGCATCCGCACATCGGTGAAGTTCCCAATAA
ACCCGGGCAGTATGTCTGTGCTGGGTTTAATGGACATGGAATGCCGGTGA
TTCTGCTGTCCGCTAAGGGACTGGCGGAGATGATCCAGTCGGGGAAGAAG
TTCGAGGAGACGGGGATGCCAAGGTTGTTCAAGACGAGTGTGGAGAGGAT
GGAGAAGGCGAGGAATGGGCCGGAGGGGGGAGATATTTTTGCATAGCAAG
CTCGATACTACAATAGATGTGTTGTTGTTGTTGGTGTATTCTTGG back to topCoding sequence (CDS) from alignment at ch5:556058..558002- >KJC3_006823-T1 ID=KJC3_006823-T1|Name=KJC3_006823-T1|organism=Aspergillus niger KJC3|type=CDS|length=5580bp|location=Sequence derived from alignment at ch5:556058..558002- (Aspergillus niger KJC3)
TTATGGGCTACTCGTCCGACTCGCATCCGCACATCGGTGAAGTTCCCAAT
AAACCCGGGCAGTATGTCTGTGCTGGGTTTAATGGACATGGAATGCCGGT
GATTCTGCTGTCCGCTAAGGGACTGGCGGAGATGATCCAGTCGGGGAAGA
AGTTCGAGGAGACGGGGATGCCAAGGTTGTTCAAGACGAGTGTGGAGAGG
ATGGAGAAGGCGAGGAATGGGCCGGAGGGGGGAGATATTTTTGCATAGAT
ATCAGGCGCCCATAACGCCAAAGCCTGCATCTCCTACACATCGGGCACTC
TCTGGCCCTACAAATTCATCCTCGGCCTACTGAGCAAAATCATAAAATCC
CCACAATTGAACGTCCAAACTTACACCCCAGTGACATCCATCACCTCAGA
AGACAACATCAACATAATCTCCACTCCCCGCGGCTCTCTCCGCGCCCGCA
AAATCGTCTACGCGACGAACGCCTACACGGCCGGCTTACTCCCCGAGTAC
TCGGCCAATATTATTCCCTGCAAGGGAATATGCTGCCATATTACAGTCCC
CGAGGGAGAGGGCAAGAAGCCCGCTCCGTTCCTCCCCTACTCGTATGCAA
TCGGGTACGGATCTGACGTTGTCGGCGGGGGCAGCTATTTAATTTCCAGA
CCGGATGGGAGTATTATAGTGGGTGGTGCGCAAGCGACATTCAAAGACAA
GCGGGAGGAATGGTATGGAGTTGTGGATGATACGACGTTAATTGAGTCTG
CAAAGAGTTACTATGATGGGTATATGCAGCGGACATTTAGGGGGTGGGAG
GATAGTGGGGCGTATGTGAAGGAGATTTGGACGGGTGGCGGCCACCTCCG
CCCGGATATCTACGGCCACATCCCAACCTACATCGAGCGCTCCGGACTAG
AAGCGGGTCTGGAGATCGCCGAATTCGAATACGCGCATATCCAGGCGTTA
AAAGATCTTCTTCGCGAGGAGAATATCGATTGTGATTTGAACATTACCCG
GAACATGAATGTGTATTTGGATGAAGAGTCGGCGGAGAAAGCCAAGCTTG
CGTATGAGATGTTGCAGGCGAGGGGGGTCAAGCTGGCCGAGGATTTGCAT
TATACGGGGAAAAGGGATGCGGAGGTGATGGGCTCCAACACAGCAACCAA
CACCATGCTCCCCCCGGACAACCCCATCACTCCCTTCTGGCGCACCCAAC
TCGACCCGCTCGACGACATCCGGAGCACCCCCGACCTGCCCCCGCAAAGC
GACATCGTAATCATCGGCTGCGGCTACTCAGGCGTCACGCTAGCTTACTA
TCTCCTCAAGCAGCTCTCTGAGCAGGGGGACAAGTCTACCAGTATTATGC
TCCTCGAAGCGAGGCAGATTTGCTCGGGCGCGACAGGTCGAAATGTTATG
GGCTACTCGTCCGACTCGCATCCGCACATCGGTGAAGTTCCCAATAAACC
CGGGCAGTATGTCTGTGCTGGGTTTAATGGACATGGAATGCCGGTGATTC
TGCTGTCCGCTAAGGGACTGGCGGAGATGATCCAGTCGGGGAAGAAGTTC
GAGGAGACGGGGATGCCAAGGTTGTTCAAGACGAGTGTGGAGAGGATGGA
GAAGGCGAGGAATGGGCCGGAGGGGGGAGATATTTTTGCATAGATATCAG
GCGCCCATAACGCCAAAGCCTGCATCTCCTACACATCGGGCACTCTCTGG
CCCTACAAATTCATCCTCGGCCTACTGAGCAAAATCATAAAATCCCCACA
ATTGAACGTCCAAACTTACACCCCAGTGACATCCATCACCTCAGAAGACA
ACATCAACATAATCTCCACTCCCCGCGGCTCTCTCCGCGCCCGCAAAATC
GTCTACGCGACGAACGCCTACACGGCCGGCTTACTCCCCGAGTACTCGGC
CAATATTATTCCCTGCAAGGGAATATGCTGCCATATTACAGTCCCCGAGG
GAGAGGGCAAGAAGCCCGCTCCGTTCCTCCCCTACTCGTATGCAATCGGG
TACGGATCTGACGTTGTCGGCGGGGGCAGCTATTTAATTTCCAGACCGGA
TGGGAGTATTATAGTGGGTGGTGCGCAAGCGACATTCAAAGACAAGCGGG
AGGAATGGTATGGAGTTGTGGATGATACGACGTTAATTGAGTCTGCAAAG
AGTTACTATGATGGGTATATGCAGCGGACATTTAGGGGGTGGGAGGATAG
TGGGGCGTATGTGAAGGAGATTTGGACGGGTGGCGGCCACCTCCGCCCGG
ATATCTACGGCCACATCCCAACCTACATCGAGCGCTCCGGACTAGAAGCG
GGTCTGGAGATCGCCGAATTCGAATACGCGCATATCCAGGCGTTAAAAGA
TCTTCTTCGCGAGGAGAATATCGATTGTGATTTGAACATTACCCGGAACA
TGAATGTGTATTTGGATGAAGAGTCGGCGGAGAAAGCCAAGCTTGCGTAT
GAGATGTTGCAGGCGAGGGGGGTCAAGCTGGCCGAGGATTTGCATTATAC
GGGGAAAAGGGATGCGGAGGTGATGGGCTCCAACACAGCAACCAACACCA
TGCTCCCCCCGGACAACCCCATCACTCCCTTCTGGCGCACCCAACTCGAC
CCGCTCGACGACATCCGGAGCACCCCCGACCTGCCCCCGCAAAGCGACAT
CGTAATCATCGGCTGCGGCTACTCAGGCGTCACGCTAGCTTACTATCTCC
TCAAGCAGCTCTCTGAGCAGGGGGACAAGTCTACCAGTATTATGCTCCTC
GAAGCGAGGCAGATTTGCTCGGGCGCGACAGGTCGAAATGTTATGGGCTA
CTCGTCCGACTCGCATCCGCACATCGGTGAAGTTCCCAATAAACCCGGGC
AGTATGTCTGTGCTGGGTTTAATGGACATGGAATGCCGGTGATTCTGCTG
TCCGCTAAGGGACTGGCGGAGATGATCCAGTCGGGGAAGAAGTTCGAGGA
GACGGGGATGCCAAGGTTGTTCAAGACGAGTGTGGAGAGGATGGAGAAGG
CGAGGAATGGGCCGGAGGGGGGAGATATTTTTGCATAGATATCAGGCGCC
CATAACGCCAAAGCCTGCATCTCCTACACATCGGGCACTCTCTGGCCCTA
CAAATTCATCCTCGGCCTACTGAGCAAAATCATAAAATCCCCACAATTGA
ACGTCCAAACTTACACCCCAGTGACATCCATCACCTCAGAAGACAACATC
AACATAATCTCCACTCCCCGCGGCTCTCTCCGCGCCCGCAAAATCGTCTA
CGCGACGAACGCCTACACGGCCGGCTTACTCCCCGAGTACTCGGCCAATA
TTATTCCCTGCAAGGGAATATGCTGCCATATTACAGTCCCCGAGGGAGAG
GGCAAGAAGCCCGCTCCGTTCCTCCCCTACTCGTATGCAATCGGGTACGG
ATCTGACGTTGTCGGCGGGGGCAGCTATTTAATTTCCAGACCGGATGGGA
GTATTATAGTGGGTGGTGCGCAAGCGACATTCAAAGACAAGCGGGAGGAA
TGGTATGGAGTTGTGGATGATACGACGTTAATTGAGTCTGCAAAGAGTTA
CTATGATGGGTATATGCAGCGGACATTTAGGGGGTGGGAGGATAGTGGGG
CGTATGTGAAGGAGATTTGGACGGGTGGCGGCCACCTCCGCCCGGATATC
TACGGCCACATCCCAACCTACATCGAGCGCTCCGGACTAGAAGCGGGTCT
GGAGATCGCCGAATTCGAATACGCGCATATCCAGGCGTTAAAAGATCTTC
TTCGCGAGGAGAATATCGATTGTGATTTGAACATTACCCGGAACATGAAT
GTGTATTTGGATGAAGAGTCGGCGGAGAAAGCCAAGCTTGCGTATGAGAT
GTTGCAGGCGAGGGGGGTCAAGCTGGCCGAGGATTTGCATTATACGGGGA
AAAGGGATGCGGAGGTGATGGGCTCCAACACAGCAACCAACACCATGCTC
CCCCCGGACAACCCCATCACTCCCTTCTGGCGCACCCAACTCGACCCGCT
CGACGACATCCGGAGCACCCCCGACCTGCCCCCGCAAAGCGACATCGTAA
TCATCGGCTGCGGCTACTCAGGCGTCACGCTAGCTTACTATCTCCTCAAG
CAGCTCTCTGAGCAGGGGGACAAGTCTACCAGTATTATGCTCCTCGAAGC
GAGGCAGATTTGCTCGGGCGCGACAGGTCGAAATGTTATGGGCTACTCGT
CCGACTCGCATCCGCACATCGGTGAAGTTCCCAATAAACCCGGGCAGTAT
GTCTGTGCTGGGTTTAATGGACATGGAATGCCGGTGATTCTGCTGTCCGC
TAAGGGACTGGCGGAGATGATCCAGTCGGGGAAGAAGTTCGAGGAGACGG
GGATGCCAAGGTTGTTCAAGACGAGTGTGGAGAGGATGGAGAAGGCGAGG
AATGGGCCGGAGGGGGGAGATATTTTTGCATAGATATCAGGCGCCCATAA
CGCCAAAGCCTGCATCTCCTACACATCGGGCACTCTCTGGCCCTACAAAT
TCATCCTCGGCCTACTGAGCAAAATCATAAAATCCCCACAATTGAACGTC
CAAACTTACACCCCAGTGACATCCATCACCTCAGAAGACAACATCAACAT
AATCTCCACTCCCCGCGGCTCTCTCCGCGCCCGCAAAATCGTCTACGCGA
CGAACGCCTACACGGCCGGCTTACTCCCCGAGTACTCGGCCAATATTATT
CCCTGCAAGGGAATATGCTGCCATATTACAGTCCCCGAGGGAGAGGGCAA
GAAGCCCGCTCCGTTCCTCCCCTACTCGTATGCAATCGGGTACGGATCTG
ACGTTGTCGGCGGGGGCAGCTATTTAATTTCCAGACCGGATGGGAGTATT
ATAGTGGGTGGTGCGCAAGCGACATTCAAAGACAAGCGGGAGGAATGGTA
TGGAGTTGTGGATGATACGACGTTAATTGAGTCTGCAAAGAGTTACTATG
ATGGGTATATGCAGCGGACATTTAGGGGGTGGGAGGATAGTGGGGCGTAT
GTGAAGGAGATTTGGACGGGTGGCGGCCACCTCCGCCCGGATATCTACGG
CCACATCCCAACCTACATCGAGCGCTCCGGACTAGAAGCGGGTCTGGAGA
TCGCCGAATTCGAATACGCGCATATCCAGGCGTTAAAAGATCTTCTTCGC
GAGGAGAATATCGATTGTGATTTGAACATTACCCGGAACATGAATGTGTA
TTTGGATGAAGAGTCGGCGGAGAAAGCCAAGCTTGCGTATGAGATGTTGC
AGGCGAGGGGGGTCAAGCTGGCCGAGGATTTGCATTATACGGGGAAAAGG
GATGCGGAGGTGATGGGCTCCAACACAGCAACCAACACCATGCTCCCCCC
GGACAACCCCATCACTCCCTTCTGGCGCACCCAACTCGACCCGCTCGACG
ACATCCGGAGCACCCCCGACCTGCCCCCGCAAAGCGACATCGTAATCATC
GGCTGCGGCTACTCAGGCGTCACGCTAGCTTACTATCTCCTCAAGCAGCT
CTCTGAGCAGGGGGACAAGTCTACCAGTATTATGCTCCTCGAAGCGAGGC
AGATTTGCTCGGGCGCGACAGGTCGAAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006823-T1.utr3p1 | KJC3_006823-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006823-T1.utr5p1 | KJC3_006823-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR006076 |
| DBxref | PFAM:PF01266 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:556058..558002 - |
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