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KJC3_006824-T1, KJC3_006824-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006824-T1
Unique NameKJC3_006824-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:558802..561321+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006824-T1 ID=KJC3_006824-T1|Name=KJC3_006824-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2520bp|location=Sequence derived from alignment at ch5:558802..561321+ (Aspergillus niger KJC3)
CAAAGACTCACTTCCCATGCCCGACCACCGCAGGGGCATCGCATCGCATC
TCAACACCTCCCAGCAATGATTACGCCCGTTTGAATTCATCCGAACGAAA
GAACTATCGCCGATAATCTCTACATGCTCGAGTCTACCACGCCGTGCGCT
TTCCGCTACAATGACCGACTATTCTAAATGGAAGGTGACCGATCTTAAAG
CCGAGCTGAAGCGGCGCGGCATCGCGCAGACCGGTCTCCGCGTGAAACAA
CAGATTATTGACCGATTGGTGGAGGAAGACGCTCGCGATGAGAAGGATGC
TGTTGCGAACGGAGAGCCGGCTGCCGAACAGGATGTTGCGCCGCAGGAAG
CGCAGCCCGTTGACGCGGAACAGCCTGTGCCAGAGGCAGAGCCAGCCGCG
GATGCGCCAGCTCAACCCGAGGCTACTGAGTCTGAGGTGATTGACAAACA
GACAGAGGAGCCAGCACAGGAACAGGAACAACAACAGGCACAAACGGAGG
AACAGGGTGATGCGGTTCCTGAGTCGAAGCCTCAGCCGGTGACTGACGAA
GCGCCTGCCGAACAGGCTGCTGAGCAAGGACAGCAACAGGAACAGCCAGA
GCAACCGGTCCAGGAATCACCGAAACCAGAGGAACCAGCTCAACCCACCG
ATACTACTACTGTTAACCAACCCGCCGATACTTCCATCCCGCAAGACCAG
ACCGAGAATGACACCGCTGCAGCACCGGTAGAGCAGGCTCCTGGAGAAGC
AGCACCGGAACAGTCTGAGGACATGGAGCCAAAACCTGCAGAACCAGCCG
CATCTGGTGAGACCGCTGCGCCGCCCGCGGCAGTCCCCTCGGAGATGAAC
ACCGGGTTGTCGACACCCCTGCCTACAGAAGAAATGCTGGAGGACAGACG
CAAGAGGAAGCGTCGCAGTCAGAGTCCTGTGCCAACACCGGAAGCGCTTG
CAAGTAAAAAGGCCAAAGCCCTAGATGAGACACCCCGTGTCGTCTTGCCC
GAGGACCGGGCTGCGGTGGACAAAGAACACGAGTCACGGCCGGACGAAGC
TCTTTCCGGTCCGCAAGGAACCCCTGAAGAACGCGCGGGGCGCGAGGCCG
CGCCGGAGGAAGCCCCGCCTGTGCAAGATGAAACATCCAAGAAAGGCGCC
CCCCTGAAACATGACGTTCGCTTCAAGGGGCTTTTTGCTGCCAAGGAGAC
GGAACAGACTCGCCCCGTCTCCCCTCCACCGGCGGATGCGGTTATGGAAG
ATGCCGACGTCGAGCCTGCCGTGCATGCTGCCACAGCAGCTCTCTATGTC
GGCGGACTGATGCGTCCTCTCCAGCCGGTCGCGCTCAAGAACCATCTTGT
CAGTCTCGCGTCCCCTCCGGATGCCTCACCCAATCCGGATGTGGTCGTAG
ACTTTTACCTGGACCCCATCAAGACACATTGCTTTGCTAGCTTTAGGTCT
GTCTCAGCAGCGTCGCGAGTCCGCACCGCCCTCCATGGTACAGTATGGCC
CAACGAACGCAACCGCAAGACTCTATTCGTGGACTTTATTCCCGAAGACA
AGTTGTCCCTCTGGATTGAGAAGGAAGAAGGATCGCGACAGCGTGGTGGC
CCTCCGGCGCGCTGGGAAGTGCGATATGAGCCAACTGATGATGGGGTAGA
GGCTGTTCTCGAAGAGGTTGATCCCCGAAGCGCTTCATCTCAGCATATGC
GTGCACCTGACGCCTCAGGATTCTCCCGTCCGCCGCCTACCGGGCCACGG
GCGGAACTGGGCACTCCTCGACGTCCCAGTGGCCCAGTCACGGCAGACTC
GAGTTCACGACCTGGGCAAGGATTCAAGCCGCTGGATGAACTTTTCATGT
CTACTACTACGAAGCCCAAGCTCTACTACCTACCGGTTCCTCGAGAAGTG
GCCGACCGGCGTTTGGATCGGTTTGACGACCTGCTACGGAAGGGAGAGTT
TCCCCGACGAGGAGGGGACGAGCGCCGTCGCATCACCTTCGAGGATGAAG
ATTTCTTCGTCGATAACGGACCGGACTTTGGTGGTGGGCGCAACCGACGA
GGCCGAGGCCGTGGTGGTCGCGGACGTGGAGGATTCGGAGATTCGTGGAG
AGATGACCGACGTAGTCGGTATTGAAATGAACAGATATACCCCTGATGAT
ATACTATGGGACTGCCACGGTTTGGGATTAGGTGCTTTGTGTAATTGCAA
TTTCCTGTACAGTAGGCGAATGCCAAGATGGCGCGGGGGACAAGCAAAAA
AAAAGAAAAAAAAAAAATATGATCTACGGACAAGAAGTGATTATATTTGA
GCCAAGATGGCGAGGTGTATACTAGGTTGGGTAAGTGTTCCGGGAGACGA
ATCAACGAATACCATCAGGATTTATTTTTATTCGGGGAGTCTCTGTTGGC
GTGGATGTTGTTTTAGGTGGATAAGTTGGAACATCAGAATCATGCAGTCA
GAACCGCTCACTACTCTCACTTGTTTAAAATTGCGGTGGCGCAGCGACCC
TCCGCCATTGCGATGCGCGG
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Coding sequence (CDS) from alignment at ch5:558802..561321+

>KJC3_006824-T1 ID=KJC3_006824-T1|Name=KJC3_006824-T1|organism=Aspergillus niger KJC3|type=CDS|length=1965bp|location=Sequence derived from alignment at ch5:558802..561321+ (Aspergillus niger KJC3)
ATGACCGACTATTCTAAATGGAAGGTGACCGATCTTAAAGCCGAGCTGAA
GCGGCGCGGCATCGCGCAGACCGGTCTCCGCGTGAAACAACAGATTATTG
ACCGATTGGTGGAGGAAGACGCTCGCGATGAGAAGGATGCTGTTGCGAAC
GGAGAGCCGGCTGCCGAACAGGATGTTGCGCCGCAGGAAGCGCAGCCCGT
TGACGCGGAACAGCCTGTGCCAGAGGCAGAGCCAGCCGCGGATGCGCCAG
CTCAACCCGAGGCTACTGAGTCTGAGGTGATTGACAAACAGACAGAGGAG
CCAGCACAGGAACAGGAACAACAACAGGCACAAACGGAGGAACAGGGTGA
TGCGGTTCCTGAGTCGAAGCCTCAGCCGGTGACTGACGAAGCGCCTGCCG
AACAGGCTGCTGAGCAAGGACAGCAACAGGAACAGCCAGAGCAACCGGTC
CAGGAATCACCGAAACCAGAGGAACCAGCTCAACCCACCGATACTACTAC
TGTTAACCAACCCGCCGATACTTCCATCCCGCAAGACCAGACCGAGAATG
ACACCGCTGCAGCACCGGTAGAGCAGGCTCCTGGAGAAGCAGCACCGGAA
CAGTCTGAGGACATGGAGCCAAAACCTGCAGAACCAGCCGCATCTGGTGA
GACCGCTGCGCCGCCCGCGGCAGTCCCCTCGGAGATGAACACCGGGTTGT
CGACACCCCTGCCTACAGAAGAAATGCTGGAGGACAGACGCAAGAGGAAG
CGTCGCAGTCAGAGTCCTGTGCCAACACCGGAAGCGCTTGCAAGTAAAAA
GGCCAAAGCCCTAGATGAGACACCCCGTGTCGTCTTGCCCGAGGACCGGG
CTGCGGTGGACAAAGAACACGAGTCACGGCCGGACGAAGCTCTTTCCGGT
CCGCAAGGAACCCCTGAAGAACGCGCGGGGCGCGAGGCCGCGCCGGAGGA
AGCCCCGCCTGTGCAAGATGAAACATCCAAGAAAGGCGCCCCCCTGAAAC
ATGACGTTCGCTTCAAGGGGCTTTTTGCTGCCAAGGAGACGGAACAGACT
CGCCCCGTCTCCCCTCCACCGGCGGATGCGGTTATGGAAGATGCCGACGT
CGAGCCTGCCGTGCATGCTGCCACAGCAGCTCTCTATGTCGGCGGACTGA
TGCGTCCTCTCCAGCCGGTCGCGCTCAAGAACCATCTTGTCAGTCTCGCG
TCCCCTCCGGATGCCTCACCCAATCCGGATGTGGTCGTAGACTTTTACCT
GGACCCCATCAAGACACATTGCTTTGCTAGCTTTAGGTCTGTCTCAGCAG
CGTCGCGAGTCCGCACCGCCCTCCATGGTACAGTATGGCCCAACGAACGC
AACCGCAAGACTCTATTCGTGGACTTTATTCCCGAAGACAAGTTGTCCCT
CTGGATTGAGAAGGAAGAAGGATCGCGACAGCGTGGTGGCCCTCCGGCGC
GCTGGGAAGTGCGATATGAGCCAACTGATGATGGGGTAGAGGCTGTTCTC
GAAGAGGTTGATCCCCGAAGCGCTTCATCTCAGCATATGCGTGCACCTGA
CGCCTCAGGATTCTCCCGTCCGCCGCCTACCGGGCCACGGGCGGAACTGG
GCACTCCTCGACGTCCCAGTGGCCCAGTCACGGCAGACTCGAGTTCACGA
CCTGGGCAAGGATTCAAGCCGCTGGATGAACTTTTCATGTCTACTACTAC
GAAGCCCAAGCTCTACTACCTACCGGTTCCTCGAGAAGTGGCCGACCGGC
GTTTGGATCGGTTTGACGACCTGCTACGGAAGGGAGAGTTTCCCCGACGA
GGAGGGGACGAGCGCCGTCGCATCACCTTCGAGGATGAAGATTTCTTCGT
CGATAACGGACCGGACTTTGGTGGTGGGCGCAACCGACGAGGCCGAGGCC
GTGGTGGTCGCGGACGTGGAGGATTCGGAGATTCGTGGAGAGATGACCGA
CGTAGTCGGTATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006824KJC3_006824Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006824-T1.utr5p1KJC3_006824-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006824-T1.exon1KJC3_006824-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006824-T1.cdsKJC3_006824-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006824-T1.utr3p1KJC3_006824-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006824-T1KJC3_006824-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR034257
DBxrefInterPro:IPR036361
DBxrefInterPro:IPR032552
DBxrefInterPro:IPR003034
DBxrefPFAM:PF02037
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:558802..561321 +
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