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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:594356..596409+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006837-T1 ID=KJC3_006837-T1|Name=KJC3_006837-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2054bp|location=Sequence derived from alignment at ch5:594356..596409+ (Aspergillus niger KJC3)
CAGATTACTCCCCCAGAATCATCAGCTCAACTTCCATGTCTAACTAATTA
GACCCCCCTCCCATCTCAATCCATCTTGTATACCAATCCTCAGTGACTGG
TAACAGCACAGTCGCGCTTATGCGTTTGGCACCTTCCGTCTTCACTTCTC
AGGTACGTTGTCTCTCCCACTATGGGTTCCCATGGCTACTCCGCATTCCC
CCCTCCCCGCCACTACCGTCACTCGCCATGACCATTTCAACATCCAATTG
AAAGGCATTAATAGAATACTAACATGATATCTGCAGGACTACATCTCGGA
TCACCTCTGGAAAGCTTCCGGAAACTTCTGAATCCACTTCACACAACCCG
CCGTATTCTTTTCTCGCAACAAATAAATTCATATCACAATGTTCGCTCGT
GTGTTCAAGGCCATGCCCGCCAGGGCCCCTGCCTTCACCTCCGTGAATGC
TTCTATCCAGTCCCGATTCATGGCTACCGTCCGTCAGGGACGTCCCGCCA
CTGAACGTGCCACTTTCACGATCCGAGATGGCCCCATCTTCCATGGGAAG
TCCTTTGGAGCCCGCTCCAACATTTCGGGTGAAGCCGTTTTCACCACTTC
CCTGGTCGGATACCCCGAGTCTCTGACCGACCCCTCCTACCGTGGTCAGA
TCCTGGTCTTCACCCAGCCTCTGATCGGTAACTATGGTGTTCCCTCCGCT
GAGAGGGACCAGCACGGTCTGCTCAAGTACTTTGAGTCTCCCAACCTCCA
GGCCGCTGGTGTCGTCGTCGCCGATGTGGCTGAGCAGTACAGCCACTGGA
CTGCCGTCGAGAGTCTCGGTGAATGGTGTGCCCGTGAGGGTGTGCCCGCC
ATCTCCGGCGTCGACACTCGTGCCATTGTCACCTACCTCCGTGAGCAGGG
TTCTTCCCTCGCTCGTATCACCGTCGGTGAGGAGTACGACGCTGACCAGG
ATGAGGCCTTCGTCGACCCTGAGCAGATCCACCTGGTCCGTCAGGTCAGC
ACCAAGGCTCCTTTCCACGTCAGCGCCGCCGACCCCCAGTGCCACGTCGC
TGTGATCGACTGCGGTGTCAAGGAGAACATTCTGCGTAGCTTGGTCAGCC
GTGGAGCCAGTATCACTGTGTTCCCCTTCGACTACCCCATCCACAAGGTC
GCTCACCACTTTGATGGTGTCTTCATCTCCAACGGCCCCGGTGACCCGAC
TCACTGCCAGGACACCGTCTACCACCTCCGTCGCCTGATGGAGACCTCCC
AGGTGCCCATCTTCGGTATCTGTCTGGGTCACCAGCTCCTGGCTCTGGCC
AACGGTGCTCGTACCATCAAGCTCAAGTATGGTAACCGTGCTCACAACAT
CCCGGCACTGGACACCACTACTGGCCGCTGCCACATCACCAGCCAGAACC
ACGGTTATGCTGTTGATGCCTCCACCCTGCCTTCCGACTGGAAGCCCTAC
TTCGTCAACCTGAACGATTCTAGCAACGAGGGTATGATCCACAAGACTCG
TCCCATATTCAGCACCCAGTTCCACCCCGAGGCCAAGGGCGGTCCCCTGG
ACTCCTCTTACCTCTTCGACATCTACCTGGACAGCGTCGTCAAGTACAAG
AACCACCAGCTGGCGTTCCACCCCAACCGGAACACCGTCCCCAGCCCTCT
CTTGGTTGACCTCTTGGCCAAGGAGCGTGTGGGCGTCCAGCCTACCATTG
GCATGCAGAACGTGGCTGCCGCCGCTGCTGCTGCCGTTGCTGCCGCTTAA
AAGGAATGTCATATGGAACTGGAGTTTGGGTTTGGGTTTAGGTCGGAATA
TCTTTGGTTGTACATGATTCTTTCGGTTTAGTTTGGGTACATTTCGGTTT
AGGAATATATTTTACTTCACATACTACTTCAATCTCCCTCTTCAACATCA
AAGTAGACAATAGTCATGTAGCCGATAACTTGGTTTGTCCCGTGTACCAC
TCAGAACTCGCAGCCCATACCTGCGCTGCTCATTTCGTTACACGTGCGTA
AGAGTTGAGGCATTATTCATTTGCTGATACGGGCCCCAATCACCTTTGCC
TAGC back to topCoding sequence (CDS) from alignment at ch5:594356..596409+ >KJC3_006837-T1 ID=KJC3_006837-T1|Name=KJC3_006837-T1|organism=Aspergillus niger KJC3|type=CDS|length=1362bp|location=Sequence derived from alignment at ch5:594356..596409+ (Aspergillus niger KJC3)
ATGTTCGCTCGTGTGTTCAAGGCCATGCCCGCCAGGGCCCCTGCCTTCAC
CTCCGTGAATGCTTCTATCCAGTCCCGATTCATGGCTACCGTCCGTCAGG
GACGTCCCGCCACTGAACGTGCCACTTTCACGATCCGAGATGGCCCCATC
TTCCATGGGAAGTCCTTTGGAGCCCGCTCCAACATTTCGGGTGAAGCCGT
TTTCACCACTTCCCTGGTCGGATACCCCGAGTCTCTGACCGACCCCTCCT
ACCGTGGTCAGATCCTGGTCTTCACCCAGCCTCTGATCGGTAACTATGGT
GTTCCCTCCGCTGAGAGGGACCAGCACGGTCTGCTCAAGTACTTTGAGTC
TCCCAACCTCCAGGCCGCTGGTGTCGTCGTCGCCGATGTGGCTGAGCAGT
ACAGCCACTGGACTGCCGTCGAGAGTCTCGGTGAATGGTGTGCCCGTGAG
GGTGTGCCCGCCATCTCCGGCGTCGACACTCGTGCCATTGTCACCTACCT
CCGTGAGCAGGGTTCTTCCCTCGCTCGTATCACCGTCGGTGAGGAGTACG
ACGCTGACCAGGATGAGGCCTTCGTCGACCCTGAGCAGATCCACCTGGTC
CGTCAGGTCAGCACCAAGGCTCCTTTCCACGTCAGCGCCGCCGACCCCCA
GTGCCACGTCGCTGTGATCGACTGCGGTGTCAAGGAGAACATTCTGCGTA
GCTTGGTCAGCCGTGGAGCCAGTATCACTGTGTTCCCCTTCGACTACCCC
ATCCACAAGGTCGCTCACCACTTTGATGGTGTCTTCATCTCCAACGGCCC
CGGTGACCCGACTCACTGCCAGGACACCGTCTACCACCTCCGTCGCCTGA
TGGAGACCTCCCAGGTGCCCATCTTCGGTATCTGTCTGGGTCACCAGCTC
CTGGCTCTGGCCAACGGTGCTCGTACCATCAAGCTCAAGTATGGTAACCG
TGCTCACAACATCCCGGCACTGGACACCACTACTGGCCGCTGCCACATCA
CCAGCCAGAACCACGGTTATGCTGTTGATGCCTCCACCCTGCCTTCCGAC
TGGAAGCCCTACTTCGTCAACCTGAACGATTCTAGCAACGAGGGTATGAT
CCACAAGACTCGTCCCATATTCAGCACCCAGTTCCACCCCGAGGCCAAGG
GCGGTCCCCTGGACTCCTCTTACCTCTTCGACATCTACCTGGACAGCGTC
GTCAAGTACAAGAACCACCAGCTGGCGTTCCACCCCAACCGGAACACCGT
CCCCAGCCCTCTCTTGGTTGACCTCTTGGCCAAGGAGCGTGTGGGCGTCC
AGCCTACCATTGGCATGCAGAACGTGGCTGCCGCCGCTGCTGCTGCCGTT
GCTGCCGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004088 | carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process |
| GO:0006541 | glutamine metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006837-T1.utr3p1 | KJC3_006837-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262914 |
| Note | MEROPS:MER0060647 |
| DBxref | InterPro:IPR035686 |
| DBxref | InterPro:IPR006274 |
| DBxref | InterPro:IPR017926 |
| DBxref | InterPro:IPR036480 |
| DBxref | InterPro:IPR029062 |
| DBxref | InterPro:IPR002474 |
| DBxref | PFAM:PF00117 |
| DBxref | PFAM:PF00988 |
| Product | Multifunctional pyrimidine synthesis protein CAD |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:594356..596409 + |
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