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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:656682..658388+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006857-T1 ID=KJC3_006857-T1|Name=KJC3_006857-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1707bp|location=Sequence derived from alignment at ch5:656682..658388+ (Aspergillus niger KJC3)
TTTGAACCTCATGGTTTTCTTATAGACTACCCAACCTTATCCTTATAGAT
TCACTTCGTTTTATTCGAGTCCTCCCTCCCTTTCCTATTCTTATCGTTAG
GCCCCACCATCCTTCCGATGGCCGCCTCTCAACCGCCTTTTTCATACCGC
CGCCTTATCCACGACAATCAGGCCCAGTTCGAGTCCCTTGTTCAAAATGG
CGATGTAAAGCCCGTGCTCTTATGGCATCTGATGTTACCCCTCGTGCTGT
CCATTCTAGCGCTCCTTGTCCCGCAGCAAAGAGGTGGCCGCTATGTCCGT
CCCCTGGTGCTGGCGTGCGTCATAGGCATCACCAGCAATGTCCTCCAACA
TCGACGCATGCTCACAGGAGGCAATGGCTACATGGGCGGCCTTATTCCCG
TCTGGAGCACCATCTGGTCCGCGACGATTCTTCTCTTCCGCGATGTTGAG
CGCGACTTCAAACGCATCGAGCGCCACCCATTGTCATCTACCATGACTAT
CTCAAACGGCGATGCCGCCCTCAACGGCCATGCTAAAGAATCAAAATGCA
TGGTCACTACCCACAACAGCAGCGCCGAACCTGTCTCATGGCAACCATAT
CCGCAGACGCTATCCCGCCGTCTCAACTGGGTCATAAGTGTAGCCACCAG
CATGCGTGGGCCTGAATGGAACTGGCGCATCTCCACCATGGGCGCCTTAC
CGGCCTCAGTCCAGGCGCAGCTCAACAACTCCTCAGAGCATCACAGCGAA
GAAGAAAAAGCAACCACAACCACAAACACCAACCCAGAACCTATCACCAT
GCGCACTCGTCTCCGTGCCACACTCACCCTCTTCATCCAATCCTACCTCC
TCCTCGACCTGATCAAGCTCCTCATGATCCGCGACCAATACTTCATGGGC
AGCGTATCTCCTCCTGCACCTCCCCCCTTCCCCTTCCACCATCTAATCCC
CTACCCCATCCTCATCCACATCTACCGCTGTCTAGTAACAGGCACCGGCG
TCCTCGCCGCCCTCAACTACGTGACCTGCCTCAACCCCCTCATCTTCGGC
GGCCTCTCCCTCGCCTTCCCCAACGCCGCCAAATCCCTCACCTCCGTCCC
CCTCTCCGCTCCCTACCTCTACCCCCCAGCCTTCGGCCCCTTCTTCACCT
CCATCCTCGACCACAGCCTTGCCGGCTGCTGGAGCCTCTGGTGGCACCAG
CTCTTCCGCTACGGCTTCATCTCCGCCGCCCACTGGCTCCTCTCTCTCCT
TCCCTCCCGTCTATCAACTTCCCGCTCCGTCCGCCGTGTACTCACTGCCT
TCGTCGCATTCTCTCTCAGCGGCTTGGTTCATGCCTCCGGCAGCTACGTC
CAGAACCGCGAGACGTATCCCTTTGCAGGCCCGTTCCGCTTCTTTGTTCT
CCAGGCGGTGGGGGTTCTCCTTCAGGGTGTTATTTCTCCGCTGTGGTTAT
GGATGCCGCGGCCGGCGAGGCGGGCTTGTAATGCCGTGTTTGCAGTGACT
TGGCTGTTGGGGTCGGCGGGATCGCTGGTAGAAGACTTTTCAAGGGGTGG
ATTGTGGTTCACGGAGCCGTTGCCGGTGAGTTTGTTAAGGGGTTTGGGGG
TTGGTGTGGATGATGGGGATAAGGGGTGGTGGTGGTGGAGTGGGAAGTGG
TTCGGGAGGTGGGATGGTGGTGGGGGGTTCTGGGATAGGGGGGTGAGGTT
TTATTGA back to topCoding sequence (CDS) from alignment at ch5:656682..658388+ >KJC3_006857-T1 ID=KJC3_006857-T1|Name=KJC3_006857-T1|organism=Aspergillus niger KJC3|type=CDS|length=1590bp|location=Sequence derived from alignment at ch5:656682..658388+ (Aspergillus niger KJC3)
ATGGCCGCCTCTCAACCGCCTTTTTCATACCGCCGCCTTATCCACGACAA
TCAGGCCCAGTTCGAGTCCCTTGTTCAAAATGGCGATGTAAAGCCCGTGC
TCTTATGGCATCTGATGTTACCCCTCGTGCTGTCCATTCTAGCGCTCCTT
GTCCCGCAGCAAAGAGGTGGCCGCTATGTCCGTCCCCTGGTGCTGGCGTG
CGTCATAGGCATCACCAGCAATGTCCTCCAACATCGACGCATGCTCACAG
GAGGCAATGGCTACATGGGCGGCCTTATTCCCGTCTGGAGCACCATCTGG
TCCGCGACGATTCTTCTCTTCCGCGATGTTGAGCGCGACTTCAAACGCAT
CGAGCGCCACCCATTGTCATCTACCATGACTATCTCAAACGGCGATGCCG
CCCTCAACGGCCATGCTAAAGAATCAAAATGCATGGTCACTACCCACAAC
AGCAGCGCCGAACCTGTCTCATGGCAACCATATCCGCAGACGCTATCCCG
CCGTCTCAACTGGGTCATAAGTGTAGCCACCAGCATGCGTGGGCCTGAAT
GGAACTGGCGCATCTCCACCATGGGCGCCTTACCGGCCTCAGTCCAGGCG
CAGCTCAACAACTCCTCAGAGCATCACAGCGAAGAAGAAAAAGCAACCAC
AACCACAAACACCAACCCAGAACCTATCACCATGCGCACTCGTCTCCGTG
CCACACTCACCCTCTTCATCCAATCCTACCTCCTCCTCGACCTGATCAAG
CTCCTCATGATCCGCGACCAATACTTCATGGGCAGCGTATCTCCTCCTGC
ACCTCCCCCCTTCCCCTTCCACCATCTAATCCCCTACCCCATCCTCATCC
ACATCTACCGCTGTCTAGTAACAGGCACCGGCGTCCTCGCCGCCCTCAAC
TACGTGACCTGCCTCAACCCCCTCATCTTCGGCGGCCTCTCCCTCGCCTT
CCCCAACGCCGCCAAATCCCTCACCTCCGTCCCCCTCTCCGCTCCCTACC
TCTACCCCCCAGCCTTCGGCCCCTTCTTCACCTCCATCCTCGACCACAGC
CTTGCCGGCTGCTGGAGCCTCTGGTGGCACCAGCTCTTCCGCTACGGCTT
CATCTCCGCCGCCCACTGGCTCCTCTCTCTCCTTCCCTCCCGTCTATCAA
CTTCCCGCTCCGTCCGCCGTGTACTCACTGCCTTCGTCGCATTCTCTCTC
AGCGGCTTGGTTCATGCCTCCGGCAGCTACGTCCAGAACCGCGAGACGTA
TCCCTTTGCAGGCCCGTTCCGCTTCTTTGTTCTCCAGGCGGTGGGGGTTC
TCCTTCAGGGTGTTATTTCTCCGCTGTGGTTATGGATGCCGCGGCCGGCG
AGGCGGGCTTGTAATGCCGTGTTTGCAGTGACTTGGCTGTTGGGGTCGGC
GGGATCGCTGGTAGAAGACTTTTCAAGGGGTGGATTGTGGTTCACGGAGC
CGTTGCCGGTGAGTTTGTTAAGGGGTTTGGGGGTTGGTGTGGATGATGGG
GATAAGGGGTGGTGGTGGTGGAGTGGGAAGTGGTTCGGGAGGTGGGATGG
TGGTGGGGGGTTCTGGGATAGGGGGGTGAGGTTTTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006857-T1.utr5p1 | KJC3_006857-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032805 |
| DBxref | PFAM:PF13813 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:656682..658388 + |
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