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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:658369..661352- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006858-T1 ID=KJC3_006858-T1|Name=KJC3_006858-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2984bp|location=Sequence derived from alignment at ch5:658369..661352- (Aspergillus niger KJC3)
GCCCGTTGACGGCGGAGACCATCTTAAGGGGAGACCCGCCGTAACGTACG
TAATGTCTCGTATTATTGCCCGAGGCTTCATGTGGTCCGAGCGTCGAAGC
CAAAAATTTCCAGAAATTTGGATGTTTAGCATCACTCAATCTTGCGCCAG
ACCCGTCAATCGCTTCCCCGCGGTCGCTTGTGCAATTCTGCCCTCGTGAA
GATGGCCTACATGTCTATGTCCCTCCACGCCGTCAACCACCGGTTGACCA
ACGTGCCTGTGAAGCAACTACCGCATCTCGCATCATGCCTCGCATCCTCC
ATTAGCAATTGCGGGGAGCTGCTGTCAACTCCCCAGAGCCAAAAGTCGGG
CAAGACGGACTCTGACAATGCCGTTCAGATTCATAAGCTCATTACTCGCT
TGGGGAGTTTGCTGCAGGACCGCACGTACGAAGGTCGCTGGACCGCGGTG
GTGCTTGTGAAGGCGCTGGTCGAGGCTGGCCAGTGGGAGATTCTACGCTC
GAGCGAACCGTTTGTTCGCGGATTGATCAGCATTTTGGCTGTAAGATGCT
CAATTGAAGATAATACTGCATGGTAGATGCTCACTGAACTGCTGCGAATA
GAAATCGGACCCCGTTTCCACGAAGAAAATGTGCATTATCACCTTAACTC
GCATCTTCCACCTGACCTACCAGTATCCGACCCTCGTTCGCGAGATCACC
ACTCCGTCTCTGCCAGGCTTCATTACCTCTGCCTTGAATCTGATCTCCGT
CAAGCCATCTTCTGAACCCGTCCGGAGACTCAAGCCGAATACTCCCTTCG
TCGAAGTTGTACTCCAAGCCGTCAATGAACTGATCGCAAGGCACCCGACT
ATCTTCCGGCCGTTCACCGCGCAGATTCACAGTATTCTTCAGGTCATCAT
CGGATCCACGTCGCCCACTTTCCCGGAACATGTATTGGAAATCGCTCAGC
AGCTATTCATCTCCCTCCACAACTGCGCCCCGAAGAACACCGGCGGCGAT
GAATGGAAGAGCGCTTGTCGCATGACCATCACCTCTGTTCACGCGGCGTC
GTCTTACGTGCTGAGGGCCATTGTGGAACAATGGGAGTCCGTTGACCCGT
CGCTACGACAGATGTCGCAACCGCAGAACTACAGCCAAGAAGTGGGCAAC
GGCCCTGACGCTTTGGGGCTTGAGGGCTGGCAGGGTCTGAATTCCGGTGT
CAACCGGCTGGTTGTGCTCTTGCGCATGCTCTCTGGATTCGTCGGCACCG
CTACTGCTTCTACCGTGACTATTCCGGTTGGAGCGATCCTGGATCTGACG
TCTCGACTGAACATGGTGTATCCCTCCGGTGGCAGCGACATCCAAGCCAA
CCCCCAGATTGGCCGCGCGGAGCGAGAGCAGCTGCTCACCGAACTCCCTC
GCATCCACATCGCGTGCATGAAGCTCCTTCTTCACCTGGTCAAGGCTCTC
GAAACCAGCGCCATCCCTGTGGCACAGAACATCCTGGAGCAGGCGCTGTG
GGTTTTCCGTGCGGAGCAATTCAGCCGGGATGTCCGCACCGCCGTGTATG
ATCTGGTCTGCGCCCTGCTCACCCGCATCGGCCCCTCCATGACCAAGCAG
AGCGTGTCCTCCCTCGCCTCTATGATCCGCAAATGCTGCCACGACCTCCT
GCCTCCCACCGGCAACCAGGGCGCAGCCACTGAGAAGCCGGACCCCAAGT
CGAAGAACAAGTCCAGCCAAGCCACCGTCAACGCCGACTCCTTCCTGAAC
CCCGGCCTGAAACAAGTCCGTCAGACCAGCTCCTCCTCGTCCTTCCCTGA
CCTCACACGCGCTGCTTCCGAGCTCCTCGCCGCCGCGCTGACGCACACAC
CGTCCGAGTTCATGTCACCGGCCCTTCGCGCCGAGGTCGACCGCACCCTC
ATCCTGACCTCGGACAAGAACGCTATGCTCGCCAGCGTCCTCAACCCATT
CCCAGCTATGCAAGGCCGTGGTGTCGGCACCAGCATTCTCCCCTTCCTGG
CGCGCAGCTATCCCGCCGAAACGGAAGTGGAATGCCTCATCCGCCCGCGC
ATGCCTGTGGTGATGAGCGGCCCCACAACCAACGGCTACGTGCCCATGGA
AGACGACGAAGACGAAGATGAAGACGCTGCAGCCACCGCCGTTCCCACAT
CTACAGCAACCGGGTTCCTTAAGCCCACTCCCACCCCCACCCTCCAACAC
CATGACATGATGGACGTGGAGAAAGATATTCCCTCGCCGCCAAGCAAACG
CAGCTACGCCGATGAAGTCGAGCAGCCGGCGGCATCATCTGCTGTCCCAT
CAGCGACGACGACGACGAGTAGCCCCGGCTCGCAGAGCAAAAAGGCCCGG
TTCGAACCAAAGGCTGCTGCTGCGGTGACCCAGCCGCCTCTGGACGCAGC
ATCTCCGGCAACTTTCACCGGCACGGCTGCTATCTCTGTCCCTACGTCGT
CCATCGCCGGGCCGGCTCCGGTGCAGACGCCAAAGCCCGCTCAGTCTTCT
ATTGCTAAGGCATCTGCCTCGGCCGCGGCGGGAGCAGCTGAGGATGAGAG
CGATGATGAAATGCCCTCTCTGAATGTCGACCCGGATACAGATGATGAGG
ATGAGGATGAGGAGTAAACGAAAGGTTAGAGGGCATATGCATGTGCCATA
TACGATATAAACCTCAAAAGTCTAGGTCTAGCGCTTGTTCAAAAGTTCAT
AAATAGATTAATCTTGGAAAGGCTCGCTCAACATGGCAGTAGATCAAAAC
AAACGCCATCGTCAATGCTTCATTTGAATCCAACACAAACCTGCACCATA
TGTATAAGTTCGCAGATAAGATAAGACGCCAGACACAGACAGATCCAACT
CTACTATCTATCATCTACTCTCACCATCTATGATCTATCCTAAATCTATA
TAGACTAAATAGTGTATACACCAACTCGCCAAAAGTCCCAAAATACCAAA
AATATAAGTAAACATCAATAAAACCTCACCCCCC back to topCoding sequence (CDS) from alignment at ch5:658369..661352- >KJC3_006858-T1 ID=KJC3_006858-T1|Name=KJC3_006858-T1|organism=Aspergillus niger KJC3|type=CDS|length=4710bp|location=Sequence derived from alignment at ch5:658369..661352- (Aspergillus niger KJC3)
AAATCGGACCCCGTTTCCACGAAGAAAATGTGCATTATCACCTTAACTCG
CATCTTCCACCTGACCTACCAGTATCCGACCCTCGTTCGCGAGATCACCA
CTCCGTCTCTGCCAGGCTTCATTACCTCTGCCTTGAATCTGATCTCCGTC
AAGCCATCTTCTGAACCCGTCCGGAGACTCAAGCCGAATACTCCCTTCGT
CGAAGTTGTACTCCAAGCCGTCAATGAACTGATCGCAAGGCACCCGACTA
TCTTCCGGCCGTTCACCGCGCAGATTCACAGTATTCTTCAGGTCATCATC
GGATCCACGTCGCCCACTTTCCCGGAACATGTATTGGAAATCGCTCAGCA
GCTATTCATCTCCCTCCACAACTGCGCCCCGAAGAACACCGGCGGCGATG
AATGGAAGAGCGCTTGTCGCATGACCATCACCTCTGTTCACGCGGCGTCG
TCTTACGTGCTGAGGGCCATTGTGGAACAATGGGAGTCCGTTGACCCGTC
GCTACGACAGATGTCGCAACCGCAGAACTACAGCCAAGAAGTGGGCAACG
GCCCTGACGCTTTGGGGCTTGAGGGCTGGCAGGGTCTGAATTCCGGTGTC
AACCGGCTGGTTGTGCTCTTGCGCATGCTCTCTGGATTCGTCGGCACCGC
TACTGCTTCTACCGTGACTATTCCGGTTGGAGCGATCCTGGATCTGACGT
CTCGACTGAACATGGTGTATCCCTCCGGTGGCAGCGACATCCAAGCCAAC
CCCCAGATTGGCCGCGCGGAGCGAGAGCAGCTGCTCACCGAACTCCCTCG
CATCCACATCGCGTGCATGAAGCTCCTTCTTCACCTGGTCAAGGCTCTCG
AAACCAGCGCCATCCCTGTGGCACAGAACATCCTGGAGCAGGCGCTGTGG
GTTTTCCGTGCGGAGCAATTCAGCCGGGATGTCCGCACCGCCGTGTATGA
TCTGGTCTGCGCCCTGCTCACCCGCATCGGCCCCTCCATGACCAAGCAGA
GCGTGTCCTCCCTCGCCTCTATGATCCGCAAATGCTGCCACGACCTCCTG
CCTCCCACCGGCAACCAGGGCGCAGCCACTGAGAAGCCGGACCCCAAGTC
GAAGAACAAGTCCAGCCAAGCCACCGTCAACGCCGACTCCTTCCTGAACC
CCGGCCTGAAACAAGTCCGTCAGACCAGCTCCTCCTCGTCCTTCCCTGAC
CTCACACGCGCTGCTTCCGAGCTCCTCGCCGCCGCGCTGACGCACACACC
GTCCGAGTTCATGTCACCGGCCCTTCGCGCCGAGGTCGACCGCACCCTCA
TCCTGACCTCGGACAAGAACGCTATGCTCGCCAGCGTCCTCAACCCATTC
CCAGCTATGCAAGGCCGTGGTGTCGGCACCAGCATTCTCCCCTTCCTGGC
GCGCAGCTATCCCGCCGAAACGGAAGTGGAATGCCTCATCCGCCCGCGCA
TGCCTGTGGTGATGAGCGGCCCCACAACCAACGGCTACGTGCCCATGGAA
GACGACGAAGACGAAGATGAAGACGCTGCAGCCACCGCCGTTCCCACATC
TACAGCAACCGGGTTCCTTAAGCCCACTCCCACCCCCACCCTCCAACACC
ATGACATGATGGACGTGGAGAAAGATATTCCCTCGCCGCCAAGCAAACGC
AGCTACGCCGATGAAGTCGAGCAGCCGGCGGCATCATCTGCTGTCCCATC
AGCGACGACGACGACGAGTAGCCCCGGCTCGCAGAGCAAAAAGGCCCGGT
TCGAACCAAAGGCTGCTGCTGCGGTGACCCAGCCGCCTCTGGACGCAGCA
TCTCCGGCAACTTTCACCGGCACGGCTGCTATCTCTGTCCCTACGTCGTC
CATCGCCGGGCCGGCTCCGGTGCAGACGCCAAAGCCCGCTCAGTCTTCTA
TTGCTAAGGCATCTGCCTCGGCCGCGGCGGGAGCAGCTGAGGATGAGAGC
GATGATGAAATGCCCTCTCTGAATGTCGACCCGGATACAGATGATGAGGA
TGAGGATGAGGAGTAAATGGCCTACATGTCTATGTCCCTCCACGCCGTCA
ACCACCGGTTGACCAACGTGCCTGTGAAGCAACTACCGCATCTCGCATCA
TGCCTCGCATCCTCCATTAGCAATTGCGGGGAGCTGCTGTCAACTCCCCA
GAGCCAAAAGTCGGGCAAGACGGACTCTGACAATGCCGTTCAGATTCATA
AGCTCATTACTCGCTTGGGGAGTTTGCTGCAGGACCGCACGTACGAAGGT
CGCTGGACCGCGGTGGTGCTTGTGAAGGCGCTGGTCGAGGCTGGCCAGTG
GGAGATTCTACGCTCGAGCGAACCGTTTGTTCGCGGATTGATCAGCATTT
TGGCTAAATCGGACCCCGTTTCCACGAAGAAAATGTGCATTATCACCTTA
ACTCGCATCTTCCACCTGACCTACCAGTATCCGACCCTCGTTCGCGAGAT
CACCACTCCGTCTCTGCCAGGCTTCATTACCTCTGCCTTGAATCTGATCT
CCGTCAAGCCATCTTCTGAACCCGTCCGGAGACTCAAGCCGAATACTCCC
TTCGTCGAAGTTGTACTCCAAGCCGTCAATGAACTGATCGCAAGGCACCC
GACTATCTTCCGGCCGTTCACCGCGCAGATTCACAGTATTCTTCAGGTCA
TCATCGGATCCACGTCGCCCACTTTCCCGGAACATGTATTGGAAATCGCT
CAGCAGCTATTCATCTCCCTCCACAACTGCGCCCCGAAGAACACCGGCGG
CGATGAATGGAAGAGCGCTTGTCGCATGACCATCACCTCTGTTCACGCGG
CGTCGTCTTACGTGCTGAGGGCCATTGTGGAACAATGGGAGTCCGTTGAC
CCGTCGCTACGACAGATGTCGCAACCGCAGAACTACAGCCAAGAAGTGGG
CAACGGCCCTGACGCTTTGGGGCTTGAGGGCTGGCAGGGTCTGAATTCCG
GTGTCAACCGGCTGGTTGTGCTCTTGCGCATGCTCTCTGGATTCGTCGGC
ACCGCTACTGCTTCTACCGTGACTATTCCGGTTGGAGCGATCCTGGATCT
GACGTCTCGACTGAACATGGTGTATCCCTCCGGTGGCAGCGACATCCAAG
CCAACCCCCAGATTGGCCGCGCGGAGCGAGAGCAGCTGCTCACCGAACTC
CCTCGCATCCACATCGCGTGCATGAAGCTCCTTCTTCACCTGGTCAAGGC
TCTCGAAACCAGCGCCATCCCTGTGGCACAGAACATCCTGGAGCAGGCGC
TGTGGGTTTTCCGTGCGGAGCAATTCAGCCGGGATGTCCGCACCGCCGTG
TATGATCTGGTCTGCGCCCTGCTCACCCGCATCGGCCCCTCCATGACCAA
GCAGAGCGTGTCCTCCCTCGCCTCTATGATCCGCAAATGCTGCCACGACC
TCCTGCCTCCCACCGGCAACCAGGGCGCAGCCACTGAGAAGCCGGACCCC
AAGTCGAAGAACAAGTCCAGCCAAGCCACCGTCAACGCCGACTCCTTCCT
GAACCCCGGCCTGAAACAAGTCCGTCAGACCAGCTCCTCCTCGTCCTTCC
CTGACCTCACACGCGCTGCTTCCGAGCTCCTCGCCGCCGCGCTGACGCAC
ACACCGTCCGAGTTCATGTCACCGGCCCTTCGCGCCGAGGTCGACCGCAC
CCTCATCCTGACCTCGGACAAGAACGCTATGCTCGCCAGCGTCCTCAACC
CATTCCCAGCTATGCAAGGCCGTGGTGTCGGCACCAGCATTCTCCCCTTC
CTGGCGCGCAGCTATCCCGCCGAAACGGAAGTGGAATGCCTCATCCGCCC
GCGCATGCCTGTGGTGATGAGCGGCCCCACAACCAACGGCTACGTGCCCA
TGGAAGACGACGAAGACGAAGATGAAGACGCTGCAGCCACCGCCGTTCCC
ACATCTACAGCAACCGGGTTCCTTAAGCCCACTCCCACCCCCACCCTCCA
ACACCATGACATGATGGACGTGGAGAAAGATATTCCCTCGCCGCCAAGCA
AACGCAGCTACGCCGATGAAGTCGAGCAGCCGGCGGCATCATCTGCTGTC
CCATCAGCGACGACGACGACGAGTAGCCCCGGCTCGCAGAGCAAAAAGGC
CCGGTTCGAACCAAAGGCTGCTGCTGCGGTGACCCAGCCGCCTCTGGACG
CAGCATCTCCGGCAACTTTCACCGGCACGGCTGCTATCTCTGTCCCTACG
TCGTCCATCGCCGGGCCGGCTCCGGTGCAGACGCCAAAGCCCGCTCAGTC
TTCTATTGCTAAGGCATCTGCCTCGGCCGCGGCGGGAGCAGCTGAGGATG
AGAGCGATGATGAAATGCCCTCTCTGAATGTCGACCCGGATACAGATGAT
GAGGATGAGGATGAGGAGTAAATGGCCTACATGTCTATGTCCCTCCACGC
CGTCAACCACCGGTTGACCAACGTGCCTGTGAAGCAACTACCGCATCTCG
CATCATGCCTCGCATCCTCCATTAGCAATTGCGGGGAGCTGCTGTCAACT
CCCCAGAGCCAAAAGTCGGGCAAGACGGACTCTGACAATGCCGTTCAGAT
TCATAAGCTCATTACTCGCTTGGGGAGTTTGCTGCAGGACCGCACGTACG
AAGGTCGCTGGACCGCGGTGGTGCTTGTGAAGGCGCTGGTCGAGGCTGGC
CAGTGGGAGATTCTACGCTCGAGCGAACCGTTTGTTCGCGGATTGATCAG
CATTTTGGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006858-T1.utr3p1 | KJC3_006858-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR012583 |
| DBxref | PFAM:PF08167 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:658369..661352 - |
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