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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:661370..665213+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006859-T2 ID=KJC3_006859-T2|Name=KJC3_006859-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3844bp|location=Sequence derived from alignment at ch5:661370..665213+ (Aspergillus niger KJC3)
CTGCTGCCTCGAGTGGGCATTCGTCCCTGTTATGGACGCTGCTTCTTTCT
CTTTCCTCCGATTGTAATCATTGATCCCTCCGTCTCTGTCTGACCTCTCT
CAATCATGACTGTAAGTGGTGGCTTCTCATTCCCCCCTGGGAACATCTCA
ATCGCTACCTTGTGAAGCTTCCCCCCTCAATCTGCCACCACATGCCTTCC
GCTGACCGAGGCACCGATTACCACTCACGCAGGGTCGAGACTCTGATAAG
GGGCATCGCTATGTTACGGCCCTGGACAATGCGCGTTGCCAGAATAAATG
GGAAGAAGTGCCAGAGTTGATTCGAAAAGTGACCAAACATGCTCCGCAGA
GAACATGTAATGCCAACTTGCCTTTCCCCGGAAATACTGGCCTGCCAGCA
GATGAACTAATGAGGATGCCACAGGTCTCCTCGAAGTAGCCAGCGCTGAA
TACCAGCTGGCCTCACATCTTCAAAAGCATCCCTCCACCCCCCGCCCTTC
CTCCGCCGCCGGTCTTCATGACCTGATTCCGTCACTTTTATCCACCGTCA
ACCGGGCAGAAGGATCAAAGCAAGAAGTTTTCCAGGCGCAGGTCTGCTTG
GGATGGGTACATTGGACTGTCAATGAGCTAGGCTTGGCGGCTGCTCGGTT
TCCTCAGGATTTTGAAGAAGCCGTGAGCGAGCTCGAGCAGGCAGGGGAAG
AGCTCTCTCCATGGACCAAGACGTGTCTCGTCAAGGCATGTTATCTCAAG
GGTGCGTATGCTCCACCGTAAGATGGGATTTGCATCTGCTAATCCATGAT
AGGTTCGGCACAGCGCATGACCTCCGATCCAGAAGGCGCCCTGGAGACCC
TTCATTCGCTTACGCCATGGGTGAACATTCAACTCCAATCCTCTACCAAC
AGCCCACAGTTTCTCTACTGGTCTGAGAAATTATTGGGTCAAGGTGCCTC
ACTGGCGTGCGAGGAAGCCAGCAAAGACCTTGCCGCTGCTAATGCTCAAA
CGATAGCCACGACGCTAGGGTTCTTCAGACTGTGGGCGTCTCATCCTTCA
GTCAAGCAGATGACTTTACCCCAAGGCATGCTTATGGACAGCACTACCGA
GCCGGTTTCGAAATCACCAACATGGAAGTCGTACTACAATTTGCTATCAA
GGATCCTGCAACAGGGCCTGCCGTATTGCCCTCCTGCAAATGGGCCTGAA
CGCCCGCAGCTCGCCAGTGAAATCCGGCGCGTTGAGTCGCTTTGTGAAGC
TAGCATTCTGCGCGAAACAAAATTCCCCACGGCTGACTCGAGCAACCCGG
AAGTTGAGGCTTGGGTTGAACAAGTCATCCAGAACTGGGAGGTGCTTTGC
GGTGCCGGTTGGACAGATGAAGAGCTTGGGGAGGGTGGCCAGAATGCTGT
CGGCAGGAACGTTCTTGATGTAAGTTCCACGCCGAGGGACTGAGAGATGG
AAAGCAACTTGCTGATGACTATAGATCCTTTACCGCGCTGCTACCAAGAC
ATACCATTCACATCTGATTTTGCGGCGTCTGTTCCACGTGCATTGTGCAC
TCGCTGACTACGACCTTGCTCTGAGGGCGCTTGACTCATATATCGAAATT
GTCACGAGTGCCAAAGAGCGAGCAGCAAAAGGGGCTGAATCGGGAGATCT
GGAGAATGATGGCATCCTTTTGCGCACCGTGTCGGAGGGTGTTACGATGT
TGAGTTGCTTTGGTTCGGAGAAAGAGGCCGAGAAAGCAAAGGATCTCACT
TCTCTCCTGAAGGAATTTGCCGAGAAGCATGTGCAAGATGATGAAGAGCA
AGGCATAACTCTCATTGCGCCTGAATCTGCTTCAACCCGCTCCCAGGCCG
TTGCTCCGTCGGACATCGCTGCAGCTTACAGAGGAATTGGTATCGGGCTT
GCTAACTGGGCTTATTGGACTCCTGTGAACGAGGATCGCGACGACATCCG
GGCAGAAGCGATCGACTATCTGGAAAGAAGTCTAGCCCCGGAGCTTGAAG
ACGATGCCAACTGCTCCTCACTATATACGCTGGCTGTTCTATTGGCAGAG
AACCGTGATCTGGACGGTGCCATTGATTACGTCAAATCGGCCCTGACATC
TGACGCACAGCATAAGATAGGTCAAGCCGATTTTGCTCGGGAGAGAGATC
TGGTGCCCCTGTGGCATCTGCTTGCTCTTCTTCTCAGCGCGAAGCAGGAC
TTCGACATTGCCGAGCGCTCGTGTGAAGCCGCATTTGAGCAGTTCCCTGC
AACGGTGACGTCACTCGCCCATAGCGACAGACGACCCCAGAAGCAGAACC
AGACTGCTCAAGACCAGATCGCGGGCATCACTCATGAGCTTATCGATAAG
CTACGAGTCCGCGAGAAGGAACGTATCATTGAGACCAGGATGACCCAGTT
GGCATTTGTGGAACTTGTCGAGGGTCCGGGGGCTGCTGTCAATCATAGCG
ACCAGCTCCTCAGTCTGTTCGCCACGCTTTTCCGCTCTCTGAACCTGGAA
GGTAGCGAGAAGGCCAATACCAAGACCGAGAACGAGCACCTTGTACCCCC
GAAAAGCTCTGCTGGAACTGTGAAGAGCCTCCGCGGCAGCTTCTTTGGAC
GCCACAAGGGACCCCGCGCCCCTGACCGAAGGGCAGAATTCGGACAGGAG
CCCAAGACAGACAATTCAGCCTATACGGATTCGGCACCGGCGATACAGGT
CACAGATGGGGAGAAGTCCGGGCTTAACGAGGGGACAGACTCACGTCAGG
CCCGTAAGAGGAGCAATACTCTGAGGAAGGGAGATGATGCCCATAATGCC
AACTCAAGCCATGTCAACGGCGATAGCGGGACTCAGGCTGGGCCTGAAGC
CGGCAACCCTGTCCCAGACATGGTTGGACTAGCTGTGTCGGACGCAGCGG
CCCAGCCGCAGAGCGCAAAGCAGCCACTGGGACCTATGGCTCACAATATG
AAGCACAACCAACCACCCGCTCCAGCCGGGCATTCCAAGCAGCCACCGGA
GCAGGATATCCGACTACCTACATCGTACGCCTTCGACTCTCCCACCAGGG
CAGTGACCAAGGTTCCACCTACTCAAGCCCAAAAGCATGGCCTGTGCATC
CTCATCAAGGTTTGGCTACTCATCGCGGGTCTCTATCGTCGAGCCTCGTC
TTTCGAGGACGCACATGAGGCATGCGAAGAGGCAGCCAAGCAGGTGACGC
GCTTCGAAGCTCTTGTGGCGTCACAAGAGACCTCCGCTAGAGCGTTTAGG
GAGCGCGGGTGGGGTGTACCCAAGAGCACTGATGAACTATGGGCAGACGT
TTATGCCGAGCGCGGTCTCCAGTCCATTGACCAGACTCGCCCGCATGAAG
CTATGGAGCACTTTGAGACGGCGCTTCTCCATTATGCGGACCATCCGAAG
GCAACTGTTGGTTTATCAAATCTGCTCCTCGATGTTTGGGAGGAGAAGAT
GCCTTTGCAGCCACCAAAGCCCCGTCTTGATGCCGCTGTGTCAACGCTAT
CGCTGTCTTCGAGCGATCAAAGCAAACCGTCATCCGAAAACAATGCGAAG
CGGTCAAGTCAAGAAGAAAAGCCGCAGGCTAAAATCGTTCCGGATTCGGA
CGAAGAGCCCCGACTCCTGAACCGCATCGCGGCCCGCGAGCGTGCCTTTG
GCCTGCTGTCCGGGTTGACCAAGCGTGGCAGTGCGTGGGACAACTCCGAG
GCGTGGTATGCACTTTCCCGCGCGTACGAGGCGGAGAATCAGATCCAAAA
GCTGAGGGATGTCCTATGGTGGTGTATCGAGCTCGAAGATCGGCGACCCA
TCCGACACTGGTCCAATATCGGCTCTGGTATATACGTTCTCTGA back to topCoding sequence (CDS) from alignment at ch5:661370..665213+ >KJC3_006859-T2 ID=KJC3_006859-T2|Name=KJC3_006859-T2|organism=Aspergillus niger KJC3|type=CDS|length=5946bp|location=Sequence derived from alignment at ch5:661370..665213+ (Aspergillus niger KJC3)
ATGACCTCCGATCCAGAAGGCGCCCTGGAGACCCTTCATTCGCTTACGCC
ATGGGTGAACATTCAACTCCAATCCTCTACCAACAGCCCACAGTTTCTCT
ACTGGTCTGAGAAATTATTGGGTCAAGGTGCCTCACTGGCGTGCGAGGAA
GCCAGCAAAGACCTTGCCGCTGCTAATGCTCAAACGATAGCCACGACGCT
AGGGTTCTTCAGACTGTGGGCGTCTCATCCTTCAGTCAAGCAGATGACTT
TACCCCAAGGCATGCTTATGGACAGCACTACCGAGCCGGTTTCGAAATCA
CCAACATGGAAGTCGTACTACAATTTGCTATCAAGGATCCTGCAACAGGG
CCTGCCGTATTGCCCTCCTGCAAATGGGCCTGAACGCCCGCAGCTCGCCA
GTGAAATCCGGCGCGTTGAGTCGCTTTGTGAAGCTAGCATTCTGCGCGAA
ACAAAATTCCCCACGGCTGACTCGAGCAACCCGGAAGTTGAGGCTTGGGT
TGAACAAGTCATCCAGAACTGGGAGGTGCTTTGCGGTGCCGGTTGGACAG
ATGAAGAGCTTGGGGAGGGTGGCCAGAATGCTGTCGGCAGGAACGTTCTT
GATATCCTTTACCGCGCTGCTACCAAGACATACCATTCACATCTGATTTT
GCGGCGTCTGTTCCACGTGCATTGTGCACTCGCTGACTACGACCTTGCTC
TGAGGGCGCTTGACTCATATATCGAAATTGTCACGAGTGCCAAAGAGCGA
GCAGCAAAAGGGGCTGAATCGGGAGATCTGGAGAATGATGGCATCCTTTT
GCGCACCGTGTCGGAGGGTGTTACGATGTTGAGTTGCTTTGGTTCGGAGA
AAGAGGCCGAGAAAGCAAAGGATCTCACTTCTCTCCTGAAGGAATTTGCC
GAGAAGCATGTGCAAGATGATGAAGAGCAAGGCATAACTCTCATTGCGCC
TGAATCTGCTTCAACCCGCTCCCAGGCCGTTGCTCCGTCGGACATCGCTG
CAGCTTACAGAGGAATTGGTATCGGGCTTGCTAACTGGGCTTATTGGACT
CCTGTGAACGAGGATCGCGACGACATCCGGGCAGAAGCGATCGACTATCT
GGAAAGAAGTCTAGCCCCGGAGCTTGAAGACGATGCCAACTGCTCCTCAC
TATATACGCTGGCTGTTCTATTGGCAGAGAACCGTGATCTGGACGGTGCC
ATTGATTACGTCAAATCGGCCCTGACATCTGACGCACAGCATAAGATAGG
TCAAGCCGATTTTGCTCGGGAGAGAGATCTGGTGCCCCTGTGGCATCTGC
TTGCTCTTCTTCTCAGCGCGAAGCAGGACTTCGACATTGCCGAGCGCTCG
TGTGAAGCCGCATTTGAGCAGTTCCCTGCAACGGTGACGTCACTCGCCCA
TAGCGACAGACGACCCCAGAAGCAGAACCAGACTGCTCAAGACCAGATCG
CGGGCATCACTCATGAGCTTATCGATAAGCTACGAGTCCGCGAGAAGGAA
CGTATCATTGAGACCAGGATGACCCAGTTGGCATTTGTGGAACTTGTCGA
GGGTCCGGGGGCTGCTGTCAATCATAGCGACCAGCTCCTCAGTCTGTTCG
CCACGCTTTTCCGCTCTCTGAACCTGGAAGGTAGCGAGAAGGCCAATACC
AAGACCGAGAACGAGCACCTTGTACCCCCGAAAAGCTCTGCTGGAACTGT
GAAGAGCCTCCGCGGCAGCTTCTTTGGACGCCACAAGGGACCCCGCGCCC
CTGACCGAAGGGCAGAATTCGGACAGGAGCCCAAGACAGACAATTCAGCC
TATACGGATTCGGCACCGGCGATACAGGTCACAGATGGGGAGAAGTCCGG
GCTTAACGAGGGGACAGACTCACGTCAGGCCCGTAAGAGGAGCAATACTC
TGAGGAAGGGAGATGATGCCCATAATGCCAACTCAAGCCATGTCAACGGC
GATAGCGGGACTCAGGCTGGGCCTGAAGCCGGCAACCCTGTCCCAGACAT
GGTTGGACTAGCTGTGTCGGACGCAGCGGCCCAGCCGCAGAGCGCAAAGC
AGCCACTGGGACCTATGGCTCACAATATGAAGCACAACCAACCACCCGCT
CCAGCCGGGCATTCCAAGCAGCCACCGGAGCAGGATATCCGACTACCTAC
ATCGTACGCCTTCGACTCTCCCACCAGGGCAGTGACCAAGGTTCCACCTA
CTCAAGCCCAAAAGCATGGCCTGTGCATCCTCATCAAGGTTTGGCTACTC
ATCGCGGGTCTCTATCGTCGAGCCTCGTCTTTCGAGGACGCACATGAGGC
ATGCGAAGAGGCAGCCAAGCAGGTGACGCGCTTCGAAGCTCTTGTGGCGT
CACAAGAGACCTCCGCTAGAGCGTTTAGGGAGCGCGGGTGGGGTGTACCC
AAGAGCACTGATGAACTATGGGCAGACGTTTATGCCGAGCGCGGTCTCCA
GTCCATTGACCAGACTCGCCCGCATGAAGCTATGGAGCACTTTGAGACGG
CGCTTCTCCATTATGCGGACCATCCGAAGGCAACTGTTGGTTTATCAAAT
CTGCTCCTCGATGTTTGGGAGGAGAAGATGCCTTTGCAGCCACCAAAGCC
CCGTCTTGATGCCGCTGTGTCAACGCTATCGCTGTCTTCGAGCGATCAAA
GCAAACCGTCATCCGAAAACAATGCGAAGCGGTCAAGTCAAGAAGAAAAG
CCGCAGGCTAAAATCGTTCCGGATTCGGACGAAGAGCCCCGACTCCTGAA
CCGCATCGCGGCCCGCGAGCGTGCCTTTGGCCTGCTGTCCGGGTTGACCA
AGCGTGGCAGTGCGTGGGACAACTCCGAGGCGTGGTATGCACTTTCCCGC
GCGTACGAGGCGGAGAATCAGATCCAAAAGCTGAGGGATGTCCTATGGTG
GTGTATCGAGCTCGAAGATCGGCGACCCATCCGACACTGGTCCAATATCG
GCTCTGGTATATACGTTCTCTGAATGACCTCCGATCCAGAAGGCGCCCTG
GAGACCCTTCATTCGCTTACGCCATGGGTGAACATTCAACTCCAATCCTC
TACCAACAGCCCACAGTTTCTCTACTGGTCTGAGAAATTATTGGGTCAAG
GTGCCTCACTGGCGTGCGAGGAAGCCAGCAAAGACCTTGCCGCTGCTAAT
GCTCAAACGATAGCCACGACGCTAGGGTTCTTCAGACTGTGGGCGTCTCA
TCCTTCAGTCAAGCAGATGACTTTACCCCAAGGCATGCTTATGGACAGCA
CTACCGAGCCGGTTTCGAAATCACCAACATGGAAGTCGTACTACAATTTG
CTATCAAGGATCCTGCAACAGGGCCTGCCGTATTGCCCTCCTGCAAATGG
GCCTGAACGCCCGCAGCTCGCCAGTGAAATCCGGCGCGTTGAGTCGCTTT
GTGAAGCTAGCATTCTGCGCGAAACAAAATTCCCCACGGCTGACTCGAGC
AACCCGGAAGTTGAGGCTTGGGTTGAACAAGTCATCCAGAACTGGGAGGT
GCTTTGCGGTGCCGGTTGGACAGATGAAGAGCTTGGGGAGGGTGGCCAGA
ATGCTGTCGGCAGGAACGTTCTTGATATCCTTTACCGCGCTGCTACCAAG
ACATACCATTCACATCTGATTTTGCGGCGTCTGTTCCACGTGCATTGTGC
ACTCGCTGACTACGACCTTGCTCTGAGGGCGCTTGACTCATATATCGAAA
TTGTCACGAGTGCCAAAGAGCGAGCAGCAAAAGGGGCTGAATCGGGAGAT
CTGGAGAATGATGGCATCCTTTTGCGCACCGTGTCGGAGGGTGTTACGAT
GTTGAGTTGCTTTGGTTCGGAGAAAGAGGCCGAGAAAGCAAAGGATCTCA
CTTCTCTCCTGAAGGAATTTGCCGAGAAGCATGTGCAAGATGATGAAGAG
CAAGGCATAACTCTCATTGCGCCTGAATCTGCTTCAACCCGCTCCCAGGC
CGTTGCTCCGTCGGACATCGCTGCAGCTTACAGAGGAATTGGTATCGGGC
TTGCTAACTGGGCTTATTGGACTCCTGTGAACGAGGATCGCGACGACATC
CGGGCAGAAGCGATCGACTATCTGGAAAGAAGTCTAGCCCCGGAGCTTGA
AGACGATGCCAACTGCTCCTCACTATATACGCTGGCTGTTCTATTGGCAG
AGAACCGTGATCTGGACGGTGCCATTGATTACGTCAAATCGGCCCTGACA
TCTGACGCACAGCATAAGATAGGTCAAGCCGATTTTGCTCGGGAGAGAGA
TCTGGTGCCCCTGTGGCATCTGCTTGCTCTTCTTCTCAGCGCGAAGCAGG
ACTTCGACATTGCCGAGCGCTCGTGTGAAGCCGCATTTGAGCAGTTCCCT
GCAACGGTGACGTCACTCGCCCATAGCGACAGACGACCCCAGAAGCAGAA
CCAGACTGCTCAAGACCAGATCGCGGGCATCACTCATGAGCTTATCGATA
AGCTACGAGTCCGCGAGAAGGAACGTATCATTGAGACCAGGATGACCCAG
TTGGCATTTGTGGAACTTGTCGAGGGTCCGGGGGCTGCTGTCAATCATAG
CGACCAGCTCCTCAGTCTGTTCGCCACGCTTTTCCGCTCTCTGAACCTGG
AAGGTAGCGAGAAGGCCAATACCAAGACCGAGAACGAGCACCTTGTACCC
CCGAAAAGCTCTGCTGGAACTGTGAAGAGCCTCCGCGGCAGCTTCTTTGG
ACGCCACAAGGGACCCCGCGCCCCTGACCGAAGGGCAGAATTCGGACAGG
AGCCCAAGACAGACAATTCAGCCTATACGGATTCGGCACCGGCGATACAG
GTCACAGATGGGGAGAAGTCCGGGCTTAACGAGGGGACAGACTCACGTCA
GGCCCGTAAGAGGAGCAATACTCTGAGGAAGGGAGATGATGCCCATAATG
CCAACTCAAGCCATGTCAACGGCGATAGCGGGACTCAGGCTGGGCCTGAA
GCCGGCAACCCTGTCCCAGACATGGTTGGACTAGCTGTGTCGGACGCAGC
GGCCCAGCCGCAGAGCGCAAAGCAGCCACTGGGACCTATGGCTCACAATA
TGAAGCACAACCAACCACCCGCTCCAGCCGGGCATTCCAAGCAGCCACCG
GAGCAGGATATCCGACTACCTACATCGTACGCCTTCGACTCTCCCACCAG
GGCAGTGACCAAGGTTCCACCTACTCAAGCCCAAAAGCATGGCCTGTGCA
TCCTCATCAAGGTTTGGCTACTCATCGCGGGTCTCTATCGTCGAGCCTCG
TCTTTCGAGGACGCACATGAGGCATGCGAAGAGGCAGCCAAGCAGGTGAC
GCGCTTCGAAGCTCTTGTGGCGTCACAAGAGACCTCCGCTAGAGCGTTTA
GGGAGCGCGGGTGGGGTGTACCCAAGAGCACTGATGAACTATGGGCAGAC
GTTTATGCCGAGCGCGGTCTCCAGTCCATTGACCAGACTCGCCCGCATGA
AGCTATGGAGCACTTTGAGACGGCGCTTCTCCATTATGCGGACCATCCGA
AGGCAACTGTTGGTTTATCAAATCTGCTCCTCGATGTTTGGGAGGAGAAG
ATGCCTTTGCAGCCACCAAAGCCCCGTCTTGATGCCGCTGTGTCAACGCT
ATCGCTGTCTTCGAGCGATCAAAGCAAACCGTCATCCGAAAACAATGCGA
AGCGGTCAAGTCAAGAAGAAAAGCCGCAGGCTAAAATCGTTCCGGATTCG
GACGAAGAGCCCCGACTCCTGAACCGCATCGCGGCCCGCGAGCGTGCCTT
TGGCCTGCTGTCCGGGTTGACCAAGCGTGGCAGTGCGTGGGACAACTCCG
AGGCGTGGTATGCACTTTCCCGCGCGTACGAGGCGGAGAATCAGATCCAA
AAGCTGAGGGATGTCCTATGGTGGTGTATCGAGCTCGAAGATCGGCGACC
CATCCGACACTGGTCCAATATCGGCTCTGGTATATACGTTCTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019734 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:661370..665213 + |
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