You are here

Home

KJC3_006864-T1, KJC3_006864-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006864-T1
Unique NameKJC3_006864-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:672884..674415-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006864-T1 ID=KJC3_006864-T1|Name=KJC3_006864-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1532bp|location=Sequence derived from alignment at ch5:672884..674415- (Aspergillus niger KJC3)
ATGTCAGCCTCCACCCGCATCCCCGTCATCGCTCAGCCCTTCGTCAGCGA
CCGGGCCAAGCGTACCCTTGACCAAGTATTACCTCCCCATACCTCCTTCC
CACAGCTACATCCCCCACACCCCCCATTCACCACCCCCAACCAAACACAA
CATTAATGATGTATAGGTCGAACAATTCGTCGAAAAAGAATGTATCCCCT
CTGAAGCCATCTTCCGCGCCCAACTGGGCACCGGCTCCCAACGCTGGTCG
ACCTACCCAGCCATCATGGAGACCCTGAAACAGAAGGCGCGCGAACAAGG
TCTCTGGAACATGTTCCTGCCCAAGAACCACTTCGCGCAGGGGGCCGGGT
TCAGCAACCTCGAGTACGGGCTGATGGCAGAGTACCTGGGCAAGAGCACG
ATTGCATCAGAGGCGACGAACAACGCCGCCCCGGACACAGGCAACATGGA
AGTCCTGGCGAAGTACGGCAACGAGCAGCAGAAAAAGCAATGGTTGGAGC
CGCTGCTTGAGGGCAAGATCCGGTCTGCCTTCCTCATGACGGAGCCGGAG
GTCGCGAGCAGTGATGCTATTAATATTCAGTTGGATATTAAGAGGGAGGG
CGATGAGTGGGTTTTGAATGGATCTGTATGTCTCACTCGCGCCCTCTCTT
TCACTTCCTACCTTCTCTGCATTAATATATACTCTCCCGAGTATACATGA
TATATATACTAATGCTGGTGTTTAGAAATGGTGGTCCTCCGGCGCCGGAG
ACCCCCGCTGCGCCATCTACCTGGTAATGGGCAAGACAGACCCCACGAAC
TCAGACCCCTACAAACAACAATCCGTGATCCTCGTCCCAGCACACAACAC
CCCCGGCATCACCGTCCACCGCATGCTTACCGTCTACGGGTACGACGACG
CGCCACACGGCCACGGCCACATCACATTCAAGAACGTGCGCGTGCCCGTC
TCCAACATCGTCCTCGGCGAAGGCCGCGGTTTCGAAATCATCCAAGGCCG
ACTCGGCCCCGGCCGCATCCACCACGCCATGCGCACCATCGGAGCGGCCG
AAAAGGCCCTCGAATGGATGATTGCGCGCATCAACGACGAACGCAAGAAG
CCCTTCGGACAGAGTCTCTCCTCGCACGGCGTGATTCTGGAGTGGGTAGC
CAAGTCACGGATTGAGATTGATGCTGCGCGGTTGATTGTGTTGAACGCGG
CGATTAAGATCGATCAAGGGGATGCGAAGAGTGCGTTGAAGGAGATTGCG
CAGGCGAAGGTCATGGTGCCGAGTATGGCGTGCGGGGTTATTGATCGTGC
GGTGCAGGCGTATGGCGCTATGGGCGTGTGTCAGGATACGCCGTTGGCGT
ATATGTGGGCTTGGGTGCGGACGTTGAGGATTGCGGATGGGCCCGATGAG
GTGCATTTGTTGCAGATGGGCAGGAGGGAGAATAAGAGTCGGAAGGAGGA
GGTGAGGAGGAAGTTGAAGTGGCAGGCGGAGGAGACGGAGAAGTTGTTGG
GTGTTACTGCTGGTGGAAGGAGTCGGTTGTAA
back to top

Coding sequence (CDS) from alignment at ch5:672884..674415-

>KJC3_006864-T1 ID=KJC3_006864-T1|Name=KJC3_006864-T1|organism=Aspergillus niger KJC3|type=CDS|length=4023bp|location=Sequence derived from alignment at ch5:672884..674415- (Aspergillus niger KJC3)
AAATGGTGGTCCTCCGGCGCCGGAGACCCCCGCTGCGCCATCTACCTGGT
AATGGGCAAGACAGACCCCACGAACTCAGACCCCTACAAACAACAATCCG
TGATCCTCGTCCCAGCACACAACACCCCCGGCATCACCGTCCACCGCATG
CTTACCGTCTACGGGTACGACGACGCGCCACACGGCCACGGCCACATCAC
ATTCAAGAACGTGCGCGTGCCCGTCTCCAACATCGTCCTCGGCGAAGGCC
GCGGTTTCGAAATCATCCAAGGCCGACTCGGCCCCGGCCGCATCCACCAC
GCCATGCGCACCATCGGAGCGGCCGAAAAGGCCCTCGAATGGATGATTGC
GCGCATCAACGACGAACGCAAGAAGCCCTTCGGACAGAGTCTCTCCTCGC
ACGGCGTGATTCTGGAGTGGGTAGCCAAGTCACGGATTGAGATTGATGCT
GCGCGGTTGATTGTGTTGAACGCGGCGATTAAGATCGATCAAGGGGATGC
GAAGAGTGCGTTGAAGGAGATTGCGCAGGCGAAGGTCATGGTGCCGAGTA
TGGCGTGCGGGGTTATTGATCGTGCGGTGCAGGCGTATGGCGCTATGGGC
GTGTGTCAGGATACGCCGTTGGCGTATATGTGGGCTTGGGTGCGGACGTT
GAGGATTGCGGATGGGCCCGATGAGGTGCATTTGTTGCAGATGGGCAGGA
GGGAGAATAAGAGTCGGAAGGAGGAGGTGAGGAGGAAGTTGAAGTGGCAG
GCGGAGGAGACGGAGAAGTTGTTGGGTGTTACTGCTGGTGGAAGGAGTCG
GTTGTAAGTCGAACAATTCGTCGAAAAAGAATGTATCCCCTCTGAAGCCA
TCTTCCGCGCCCAACTGGGCACCGGCTCCCAACGCTGGTCGACCTACCCA
GCCATCATGGAGACCCTGAAACAGAAGGCGCGCGAACAAGGTCTCTGGAA
CATGTTCCTGCCCAAGAACCACTTCGCGCAGGGGGCCGGGTTCAGCAACC
TCGAGTACGGGCTGATGGCAGAGTACCTGGGCAAGAGCACGATTGCATCA
GAGGCGACGAACAACGCCGCCCCGGACACAGGCAACATGGAAGTCCTGGC
GAAGTACGGCAACGAGCAGCAGAAAAAGCAATGGTTGGAGCCGCTGCTTG
AGGGCAAGATCCGGTCTGCCTTCCTCATGACGGAGCCGGAGGTCGCGAGC
AGTGATGCTATTAATATTCAGTTGGATATTAAGAGGGAGGGCGATGAGTG
GGTTTTGAATGGATCTATGTCAGCCTCCACCCGCATCCCCGTCATCGCTC
AGCCCTTCGTCAGCGACCGGGCCAAGCGTACCCTTGACCAAAAATGGTGG
TCCTCCGGCGCCGGAGACCCCCGCTGCGCCATCTACCTGGTAATGGGCAA
GACAGACCCCACGAACTCAGACCCCTACAAACAACAATCCGTGATCCTCG
TCCCAGCACACAACACCCCCGGCATCACCGTCCACCGCATGCTTACCGTC
TACGGGTACGACGACGCGCCACACGGCCACGGCCACATCACATTCAAGAA
CGTGCGCGTGCCCGTCTCCAACATCGTCCTCGGCGAAGGCCGCGGTTTCG
AAATCATCCAAGGCCGACTCGGCCCCGGCCGCATCCACCACGCCATGCGC
ACCATCGGAGCGGCCGAAAAGGCCCTCGAATGGATGATTGCGCGCATCAA
CGACGAACGCAAGAAGCCCTTCGGACAGAGTCTCTCCTCGCACGGCGTGA
TTCTGGAGTGGGTAGCCAAGTCACGGATTGAGATTGATGCTGCGCGGTTG
ATTGTGTTGAACGCGGCGATTAAGATCGATCAAGGGGATGCGAAGAGTGC
GTTGAAGGAGATTGCGCAGGCGAAGGTCATGGTGCCGAGTATGGCGTGCG
GGGTTATTGATCGTGCGGTGCAGGCGTATGGCGCTATGGGCGTGTGTCAG
GATACGCCGTTGGCGTATATGTGGGCTTGGGTGCGGACGTTGAGGATTGC
GGATGGGCCCGATGAGGTGCATTTGTTGCAGATGGGCAGGAGGGAGAATA
AGAGTCGGAAGGAGGAGGTGAGGAGGAAGTTGAAGTGGCAGGCGGAGGAG
ACGGAGAAGTTGTTGGGTGTTACTGCTGGTGGAAGGAGTCGGTTGTAAGT
CGAACAATTCGTCGAAAAAGAATGTATCCCCTCTGAAGCCATCTTCCGCG
CCCAACTGGGCACCGGCTCCCAACGCTGGTCGACCTACCCAGCCATCATG
GAGACCCTGAAACAGAAGGCGCGCGAACAAGGTCTCTGGAACATGTTCCT
GCCCAAGAACCACTTCGCGCAGGGGGCCGGGTTCAGCAACCTCGAGTACG
GGCTGATGGCAGAGTACCTGGGCAAGAGCACGATTGCATCAGAGGCGACG
AACAACGCCGCCCCGGACACAGGCAACATGGAAGTCCTGGCGAAGTACGG
CAACGAGCAGCAGAAAAAGCAATGGTTGGAGCCGCTGCTTGAGGGCAAGA
TCCGGTCTGCCTTCCTCATGACGGAGCCGGAGGTCGCGAGCAGTGATGCT
ATTAATATTCAGTTGGATATTAAGAGGGAGGGCGATGAGTGGGTTTTGAA
TGGATCTATGTCAGCCTCCACCCGCATCCCCGTCATCGCTCAGCCCTTCG
TCAGCGACCGGGCCAAGCGTACCCTTGACCAAAAATGGTGGTCCTCCGGC
GCCGGAGACCCCCGCTGCGCCATCTACCTGGTAATGGGCAAGACAGACCC
CACGAACTCAGACCCCTACAAACAACAATCCGTGATCCTCGTCCCAGCAC
ACAACACCCCCGGCATCACCGTCCACCGCATGCTTACCGTCTACGGGTAC
GACGACGCGCCACACGGCCACGGCCACATCACATTCAAGAACGTGCGCGT
GCCCGTCTCCAACATCGTCCTCGGCGAAGGCCGCGGTTTCGAAATCATCC
AAGGCCGACTCGGCCCCGGCCGCATCCACCACGCCATGCGCACCATCGGA
GCGGCCGAAAAGGCCCTCGAATGGATGATTGCGCGCATCAACGACGAACG
CAAGAAGCCCTTCGGACAGAGTCTCTCCTCGCACGGCGTGATTCTGGAGT
GGGTAGCCAAGTCACGGATTGAGATTGATGCTGCGCGGTTGATTGTGTTG
AACGCGGCGATTAAGATCGATCAAGGGGATGCGAAGAGTGCGTTGAAGGA
GATTGCGCAGGCGAAGGTCATGGTGCCGAGTATGGCGTGCGGGGTTATTG
ATCGTGCGGTGCAGGCGTATGGCGCTATGGGCGTGTGTCAGGATACGCCG
TTGGCGTATATGTGGGCTTGGGTGCGGACGTTGAGGATTGCGGATGGGCC
CGATGAGGTGCATTTGTTGCAGATGGGCAGGAGGGAGAATAAGAGTCGGA
AGGAGGAGGTGAGGAGGAAGTTGAAGTGGCAGGCGGAGGAGACGGAGAAG
TTGTTGGGTGTTACTGCTGGTGGAAGGAGTCGGTTGTAAGTCGAACAATT
CGTCGAAAAAGAATGTATCCCCTCTGAAGCCATCTTCCGCGCCCAACTGG
GCACCGGCTCCCAACGCTGGTCGACCTACCCAGCCATCATGGAGACCCTG
AAACAGAAGGCGCGCGAACAAGGTCTCTGGAACATGTTCCTGCCCAAGAA
CCACTTCGCGCAGGGGGCCGGGTTCAGCAACCTCGAGTACGGGCTGATGG
CAGAGTACCTGGGCAAGAGCACGATTGCATCAGAGGCGACGAACAACGCC
GCCCCGGACACAGGCAACATGGAAGTCCTGGCGAAGTACGGCAACGAGCA
GCAGAAAAAGCAATGGTTGGAGCCGCTGCTTGAGGGCAAGATCCGGTCTG
CCTTCCTCATGACGGAGCCGGAGGTCGCGAGCAGTGATGCTATTAATATT
CAGTTGGATATTAAGAGGGAGGGCGATGAGTGGGTTTTGAATGGATCTAT
GTCAGCCTCCACCCGCATCCCCGTCATCGCTCAGCCCTTCGTCAGCGACC
GGGCCAAGCGTACCCTTGACCAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006864KJC3_006864Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006864-T1KJC3_006864-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006864-T1.cdsKJC3_006864-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006864-T1.exon3KJC3_006864-T1.exon3Aspergillus niger KJC3exon
KJC3_006864-T1.exon2KJC3_006864-T1.exon2Aspergillus niger KJC3exon
KJC3_006864-T1.exon1KJC3_006864-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036250
DBxrefInterPro:IPR009100
DBxrefInterPro:IPR009075
DBxrefInterPro:IPR013786
DBxrefInterPro:IPR037069
DBxrefInterPro:IPR006091
DBxrefPFAM:PF02771
DBxrefPFAM:PF02770
DBxrefPFAM:PF08028
DBxrefPFAM:PF00441
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:672884..674415 -
Powered by Drupal