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KJC3_006877-T1, KJC3_006877-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006877-T1
Unique NameKJC3_006877-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:717521..719155+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006877-T1 ID=KJC3_006877-T1|Name=KJC3_006877-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1635bp|location=Sequence derived from alignment at ch5:717521..719155+ (Aspergillus niger KJC3)
TCTCAATCTTACTATCTACAAGTTTTAAATCCCTCCGGTGTCAAAACCCG
CGGGTCCGAAATCCTTCCGTTCACACAGATACCTACCTCCATTCTTATAA
AATACCACCCATCATGACCGACCCCGCCCTCCAAATCCCCGAAGTCATCC
AAACCGCCTCCATCAACCCGGCGCCGTCCCCGGAACACGACGTCAACCCG
CCCACCGCAGCCTCCGAGAAGCAGCCCATCGTGGAAGATGATGTCGCCTC
CGAAGCAGGCAGTATCCCCTCCGATGTTGTCGATCCTCACCGCATGATCA
AGCCCGTCTCGCGACGACACCATCTGCCCCCATTGCCCGATCTGCGCTTC
GAGCAGAGCTATCTCGCCAGCTTGCGGGGAGCTGATACCTGGGGCCGAGT
AGCTTGGATTACCATCAGAGACCAGGTAGGACACCAGTCTGCCCTGCAAT
ACACTACTGGAACAAGTCAACTGGAAGCAAAAGAGTCCTCAAAACTGACA
CGAATTGTCTATATAGGTCCTCCTCCCTCTAATCCAGGGCACCGTCTGGA
CTCTCGCTCTCTCTGGCTGGCGATTCTGGAACCGCAACGCGTCCCTCAGT
GGCCAGACACTCGGAAGCAAGATCCGGAGATGGTGGTACGAGGTGAACAA
CTGGAAGCTGCCTCCTTTGCGATCGGCCAGGGATCCTCACATGGCGGCGA
AGGTGGAAGACGTGAGTGCATCCATCCCAATATCCATTCGCGTCGCTCTA
TTTTCCTTTCTCCCCCCCCCCCCCCCCCCCCCACCAACCTTTCCTTGAGA
TATCTTTCTATTTTCATTTCAATTGGTTATTCCTCTAAGCCGAGATATTC
GGTCACATATGCCAATGAGACGGACACTGACATTTGCGGAGTTTTTGCAG
TTCTACACGGCCCAGTTCTCGAATGCCGGTGCTGACTAGGTTGTCTTTTT
TGAGTTGATTTGTATGGTTGTCAAAGGTATTGACGTGACTGTGGGTGTCT
AGTAAAGTCTGCATTTGGGGAGTTTAGCGTACGGCGTTTATCCTTTCGAA
CCAGTGAGCCTTCCTTGATTGATATTAAGCTTCCGTATATAGCCTGGGGC
TTTCATTTTCCTACACGCTATTTCTGGTGTCTAGAGCCGAGGGATACGGA
ACTTCTATTGTTTCATCCCAATCTTGCAATTTAAGTACTGTACATAGCGC
ATAGCAGCCCCGGCAAGAGGTCCGTCCATCTGGTATGACAGGTTATGTCT
TGGAGTCCTCATCTCTCTAATACCTAATCGATCCACAGCATGGTCATGCT
ATATAGTAGTATAGCAGTCACGGGGAAAGAACTCCATACCACACACATCG
CATTTCTAATAACAGCACAATTTTTTTGCCGCAAAGTTGAACCCGACAAA
TTCCACCCACGAACAGAACGCCTCGAAGAAAAATGTGAGCGAGTCTTGTC
TCAAGTCTGAGAAGAAAGGTATTCCGATGGATAACTCTATCAAGACGCGG
GGAATCGGCCACTGAGGGATTCCGACCATTGGTACTGTGTTATAGTATAT
GTGCCTTGCCTAGTTCTTTTTCTTAAGCTGTTTGAGTCTTCGTCTCAGTC
GCAGTAGGCTGCGATACTTCGACACTAGTAGAAGT
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Coding sequence (CDS) from alignment at ch5:717521..719155+

>KJC3_006877-T1 ID=KJC3_006877-T1|Name=KJC3_006877-T1|organism=Aspergillus niger KJC3|type=CDS|length=1638bp|location=Sequence derived from alignment at ch5:717521..719155+ (Aspergillus niger KJC3)
ATGACCGACCCCGCCCTCCAAATCCCCGAAGTCATCCAAACCGCCTCCAT
CAACCCGGCGCCGTCCCCGGAACACGACGTCAACCCGCCCACCGCAGCCT
CCGAGAAGCAGCCCATCGTGGAAGATGATGTCGCCTCCGAAGCAGGCAGT
ATCCCCTCCGATGTTGTCGATCCTCACCGCATGATCAAGCCCGTCTCGCG
ACGACACCATCTGCCCCCATTGCCCGATCTGCGCTTCGAGCAGAGCTATC
TCGCCAGCTTGCGGGGAGCTGATACCTGGGGCCGAGTAGCTTGGATTACC
ATCAGAGACCAGGTCCTCCTCCCTCTAATCCAGGGCACCGTCTGGACTCT
CGCTCTCTCTGGCTGGCGATTCTGGAACCGCAACGCGTCCCTCAGTGGCC
AGACACTCGGAAGCAAGATCCGGAGATGGTGGTACGAGGTGAACAACTGG
AAGCTGCCTCCTTTGCGATCGGCCAGGGATCCTCACATGGCGGCGAAGGT
GGAAGACTTCTACACGGCCCAGTTCTCGAATGCCGGTGCTGACTAGATGA
CCGACCCCGCCCTCCAAATCCCCGAAGTCATCCAAACCGCCTCCATCAAC
CCGGCGCCGTCCCCGGAACACGACGTCAACCCGCCCACCGCAGCCTCCGA
GAAGCAGCCCATCGTGGAAGATGATGTCGCCTCCGAAGCAGGCAGTATCC
CCTCCGATGTTGTCGATCCTCACCGCATGATCAAGCCCGTCTCGCGACGA
CACCATCTGCCCCCATTGCCCGATCTGCGCTTCGAGCAGAGCTATCTCGC
CAGCTTGCGGGGAGCTGATACCTGGGGCCGAGTAGCTTGGATTACCATCA
GAGACCAGGTCCTCCTCCCTCTAATCCAGGGCACCGTCTGGACTCTCGCT
CTCTCTGGCTGGCGATTCTGGAACCGCAACGCGTCCCTCAGTGGCCAGAC
ACTCGGAAGCAAGATCCGGAGATGGTGGTACGAGGTGAACAACTGGAAGC
TGCCTCCTTTGCGATCGGCCAGGGATCCTCACATGGCGGCGAAGGTGGAA
GACTTCTACACGGCCCAGTTCTCGAATGCCGGTGCTGACTAGATGACCGA
CCCCGCCCTCCAAATCCCCGAAGTCATCCAAACCGCCTCCATCAACCCGG
CGCCGTCCCCGGAACACGACGTCAACCCGCCCACCGCAGCCTCCGAGAAG
CAGCCCATCGTGGAAGATGATGTCGCCTCCGAAGCAGGCAGTATCCCCTC
CGATGTTGTCGATCCTCACCGCATGATCAAGCCCGTCTCGCGACGACACC
ATCTGCCCCCATTGCCCGATCTGCGCTTCGAGCAGAGCTATCTCGCCAGC
TTGCGGGGAGCTGATACCTGGGGCCGAGTAGCTTGGATTACCATCAGAGA
CCAGGTCCTCCTCCCTCTAATCCAGGGCACCGTCTGGACTCTCGCTCTCT
CTGGCTGGCGATTCTGGAACCGCAACGCGTCCCTCAGTGGCCAGACACTC
GGAAGCAAGATCCGGAGATGGTGGTACGAGGTGAACAACTGGAAGCTGCC
TCCTTTGCGATCGGCCAGGGATCCTCACATGGCGGCGAAGGTGGAAGACT
TCTACACGGCCCAGTTCTCGAATGCCGGTGCTGACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006877KJC3_006877Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006877-T1KJC3_006877-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006877-T1.utr5p1KJC3_006877-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006877-T1.exon1KJC3_006877-T1.exon1Aspergillus niger KJC3exon
KJC3_006877-T1.exon2KJC3_006877-T1.exon2Aspergillus niger KJC3exon
KJC3_006877-T1.exon3KJC3_006877-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006877-T1.cdsKJC3_006877-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006877-T1.utr3p1KJC3_006877-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013898
DBxrefPFAM:PF08589
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:717521..719155 +
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