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KJC3_006880-T1, KJC3_006880-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006880-T1
Unique NameKJC3_006880-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:724420..725630+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006880-T1 ID=KJC3_006880-T1|Name=KJC3_006880-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1211bp|location=Sequence derived from alignment at ch5:724420..725630+ (Aspergillus niger KJC3)
TATAGGATGAAATGTCAATGATGCATGACATTGCAGCAACCGAGATACGA
AACCTTGCTCTGAAAGTGACCAATCACAGCCGAATACCATCTGACCCCCC
AACTCACCATGAAGAAATAAATGGAGGCGATTTCAAGAACAATTAGCACC
ATAGACTTATATGTACAAACAAAATATCATACTCACTCAAGACCAATACC
AATCTTTTACCCCCTTGATACCTACTCCTACATCCAAAATGGTACCACCC
CCGAAACTCCCTCTCCCCAAACCATCCCTATCCCCCTCCTCCACATCCCC
ATCCACCCGCTGGCTCGCCATCCAAACCCGCGACCCCAAATTTACCAACG
CCTTCGTGTACGCCGTCCTCACAACAAAAATCTACTGCCGCCCAACCTGT
CCCGCGCGTCTCGCCCGACGAGCCAACGTCCGGTTCTACGATACAGCTTC
GCAGGCTGAGCTTGCAGGGTTTCGCCCCTGTAAGCGCTGCAAACCCGAGA
TTGTCATCAACAATAGCAACAACTTGTTGGGGGCGGGTAGCAATACCACA
GCTACTGGTAGTGGTACTTTTAGTACTACTTTCCATCCGCAAATCCCCTC
AGTGCAGAGAGCTTGTCAGACTATCAGGGCTTCTGTGCAGGCGGGTTCAA
AACCGACGTTGCGGATGCTGGCGGCGGAGGCGGGGCTGACGCCGAGTCAT
TTTCATAGGGTGTTTAAAAGGGTGATGGGCGTTACGGTGGGGAGGTATGT
GGTTGATGTTATAAGGAAGAGTGGTGATGGGGAGGTGTTGGAGGGATCGT
GTAGGGATTGGGTTGGGGGTGAGGGTGAGGGTGAGGATGCTGGAAATTGG
CCCGTGCTATGGAATGACTTCGATGTTTTACTAGCCGCTGAGGAGGAGGA
TGGGTTCGTTGTTCCTACTACTGTTACAATGCAGGATGTACAACCTGTAG
TGCCGGTGCAGGATGAGGAACTTCTTGCTTGGCGTGCAGTAGGTTCTTAC
GGCGTTGGGGGAGGGTGTTCGGTTGATGAAACGCTTGCATTGGGTCATGA
AGCGCTGTAGAAATACTTTAAGTTGTTTTAAGCACCTATTGTGTTTGAAG
ATGAGAAGGAATGAAACCTTATGAGGGGATGGGTGATCGCAGATTAAGCG
ATCCTGTCGCATGACATGCACTGCCTCGATGGGACCTGACAGTAAGGGTT
GTATACGCGTA
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Coding sequence (CDS) from alignment at ch5:724420..725630+

>KJC3_006880-T1 ID=KJC3_006880-T1|Name=KJC3_006880-T1|organism=Aspergillus niger KJC3|type=CDS|length=900bp|location=Sequence derived from alignment at ch5:724420..725630+ (Aspergillus niger KJC3)
ATGTACAAACAAAATATCATACTCACTCAAGACCAATACCAATCTTTTAC
CCCCTTGATACCTACTCCTACATCCAAAATGGTACCACCCCCGAAACTCC
CTCTCCCCAAACCATCCCTATCCCCCTCCTCCACATCCCCATCCACCCGC
TGGCTCGCCATCCAAACCCGCGACCCCAAATTTACCAACGCCTTCGTGTA
CGCCGTCCTCACAACAAAAATCTACTGCCGCCCAACCTGTCCCGCGCGTC
TCGCCCGACGAGCCAACGTCCGGTTCTACGATACAGCTTCGCAGGCTGAG
CTTGCAGGGTTTCGCCCCTGTAAGCGCTGCAAACCCGAGATTGTCATCAA
CAATAGCAACAACTTGTTGGGGGCGGGTAGCAATACCACAGCTACTGGTA
GTGGTACTTTTAGTACTACTTTCCATCCGCAAATCCCCTCAGTGCAGAGA
GCTTGTCAGACTATCAGGGCTTCTGTGCAGGCGGGTTCAAAACCGACGTT
GCGGATGCTGGCGGCGGAGGCGGGGCTGACGCCGAGTCATTTTCATAGGG
TGTTTAAAAGGGTGATGGGCGTTACGGTGGGGAGGTATGTGGTTGATGTT
ATAAGGAAGAGTGGTGATGGGGAGGTGTTGGAGGGATCGTGTAGGGATTG
GGTTGGGGGTGAGGGTGAGGGTGAGGATGCTGGAAATTGGCCCGTGCTAT
GGAATGACTTCGATGTTTTACTAGCCGCTGAGGAGGAGGATGGGTTCGTT
GTTCCTACTACTGTTACAATGCAGGATGTACAACCTGTAGTGCCGGTGCA
GGATGAGGAACTTCTTGCTTGGCGTGCAGTAGGTTCTTACGGCGTTGGGG
GAGGGTGTTCGGTTGATGAAACGCTTGCATTGGGTCATGAAGCGCTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0008168methyltransferase activity
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006880KJC3_006880Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006880-T1.utr5p1KJC3_006880-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006880-T1.exon1KJC3_006880-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006880-T1.cdsKJC3_006880-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006880-T1.utr3p1KJC3_006880-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006880-T1KJC3_006880-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR018060
DBxrefInterPro:IPR035451
DBxrefInterPro:IPR004026
DBxrefPFAM:PF00165
DBxrefPFAM:PF02805
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:724420..725630 +
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