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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:835293..837495+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006913-T1 ID=KJC3_006913-T1|Name=KJC3_006913-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2203bp|location=Sequence derived from alignment at ch5:835293..837495+ (Aspergillus niger KJC3)
TAGGATTGGTATGATTCTCATCTGCTCCTCTGGCAGCCCCTGCTAGTCTA
GTGAGATCGAGACCCTGGAGGCGTAGATTGCTCGGCTCCAGGTCCATTCG
CCATTGCCATTCGACCGCTGCTCGAAGTAGTCAACGCCCCCCCTGTCATG
ATAATCCTGGTAAATGCATACGCGCTTTTTCTTCGAACAATCCATGCGTC
CTTATTCAATTATCCTCGGGGAACCCATTCCCCCCGTCTTTCCCTCTTTA
GCTTAATTGATTGACTCTCGTTCTTTCCGGGTTGTTGGGTATTTACTCCG
GCTCGACCCTCGTCCACTATTGTCCCTCGTTTAATCGTTGCTAACTCGTC
ACGCCCACGATTTTGTCCGCCCGATCTTTTTCATCGAGACATTATCACTG
TCCCTTCCATGCTAGTACTTTGTCTCTGCGCTCTTCAGGCTTCACCTTAA
AGTCCAGAAAGTTTTCGACTTCACTATCAGCTCACATCACGACGGCCGGC
TTGGCTTGGTACCGATAGCCTCAATCGCTTCAGCTGAGCTGTGCTGCCAG
ACTCGACATCTTTGGAGCCCCTTAATCAAAATATCTGAGAAGGCCTTTGG
AGATATTTTGACATCTGCATCTGTCCCTTCAGGGCGATCGTTGAACACTG
TCCTTTCCACAGAGCCCGCTGCATCCATATTTCGTATAGTCCTGACTCCC
CTATTTCATGTCTCTTAGCATGCCCAGGGCCTCCCCGGCCCGGATCCTGG
GTGGTACTACTTTATTATCGACGTTCATTACTACTATCCTCGATGGCATG
TGCTTCACCTTCTCCAGATCCCTCTCATCTCGTGTGTCTTCTGTTGAATC
CGCCATTGTCAGCCTAAGTGCAGTCAGCTGTGTTGCGCTTGTATCGTTGA
TGCTCCTCTGGATCAAAGATATCAAAAGTGAGCCCACAGAGCAGAGCAGA
AACCACCGAGCCATCACATATGGGCTTATCGCTGCATATTTATCAGTGGC
CACTGGCGTGACAGCAGGAGGGATAGCATGGAGTGCTGCTCAATCCGTGT
CAGCTAAGAAGTCGACGGTCACAAGACATCAGTCTTTGCTAGTGGCTCGC
TGCACCATATGGGCCATATCGGTTCTCAGCCAAGGCATACTAGGAGGATA
CCTCCTGACAACCTTGACGAGACGGGAGCCCACAAGAAACTGGTCGCCAC
CATCCGTATCCCAAGAGCTTGAGGTTCTTTCTGATAAAGCAAGCGTAAAA
GACGCAAGCACCGTGCAATCATCCTCTCTGGCCAGCGAGTCCCAGCGACC
ATCCGCTGATTTGAAGACGAGTCCTGATACTGTACCTCCGATCCAACCGT
CTGTCTCAAATACCGAGTCCCAGGCCTCAAACCGCTATTCTGGACGTACA
CTATTCCAGCATGACTCCAAGCAAAGCTCCTTTGACCTGCAGCGATCATA
CGTACCTCCTGGAGATACCACAGTCACACCAGCCACAGTAGAGGAGCATC
CCGGTGACCAAACCGGCAGCGCTGCAGTCGGGGCCAAGCTTCGCCCCGAA
CCCCCCAAGATTCGACGAAGCTACTCCGATACAAAGCGGTCCTTGGATGG
CTTGGTTCGCCAACCCTCGTCAGCACGGTCATCGCCCGCGACTTCATCAA
CACAGCTGGTGACTCCTGCCAGACCTGCCCCTCCCAAGCTGAAGCTCCCC
GATGAGAGCTTCATTCACCCGTTATTCCGCTCCGACAGCTCATCGCCACC
CCCAACCCCAATGCCAGGTACCACGGTGATTGCCTCACCAGCAGCCGGCC
AGACCATTTCCGTGCAGGCCTTGAACCGGGTCAGATCTACTCGTTCGCTC
CGATCCCAAGCACCACGCAGCAGATCGCCGCTGTTCGATCAACCCCTCAA
CGGGATGGAACGGAACACCGAGTCCCCGGAACCCAGCGGTCGAGGGTCTC
CGATGCCCAGCTTCATCATGGCGGCAGATGTGCGGAGCAGTATATCACGG
TATGAAAAGAAATATGATCTGAACGAATCACCGGATGAGAGCTAGCTGGA
CCGGAAGAGGGTGCGACCGCATTGCAGGTTTGAGCTTACATGTCTTTCCT
TTGTTTGTGTTTTCCTATGTTGATAGATATCCTGGACATAGCGTTTGATG
TAGTTAGCAAAGTACTTTCATAGATAAGTATAGATCATATAATGCATCAT
GGC back to topCoding sequence (CDS) from alignment at ch5:835293..837495+ >KJC3_006913-T1 ID=KJC3_006913-T1|Name=KJC3_006913-T1|organism=Aspergillus niger KJC3|type=CDS|length=1338bp|location=Sequence derived from alignment at ch5:835293..837495+ (Aspergillus niger KJC3)
ATGTCTCTTAGCATGCCCAGGGCCTCCCCGGCCCGGATCCTGGGTGGTAC
TACTTTATTATCGACGTTCATTACTACTATCCTCGATGGCATGTGCTTCA
CCTTCTCCAGATCCCTCTCATCTCGTGTGTCTTCTGTTGAATCCGCCATT
GTCAGCCTAAGTGCAGTCAGCTGTGTTGCGCTTGTATCGTTGATGCTCCT
CTGGATCAAAGATATCAAAAGTGAGCCCACAGAGCAGAGCAGAAACCACC
GAGCCATCACATATGGGCTTATCGCTGCATATTTATCAGTGGCCACTGGC
GTGACAGCAGGAGGGATAGCATGGAGTGCTGCTCAATCCGTGTCAGCTAA
GAAGTCGACGGTCACAAGACATCAGTCTTTGCTAGTGGCTCGCTGCACCA
TATGGGCCATATCGGTTCTCAGCCAAGGCATACTAGGAGGATACCTCCTG
ACAACCTTGACGAGACGGGAGCCCACAAGAAACTGGTCGCCACCATCCGT
ATCCCAAGAGCTTGAGGTTCTTTCTGATAAAGCAAGCGTAAAAGACGCAA
GCACCGTGCAATCATCCTCTCTGGCCAGCGAGTCCCAGCGACCATCCGCT
GATTTGAAGACGAGTCCTGATACTGTACCTCCGATCCAACCGTCTGTCTC
AAATACCGAGTCCCAGGCCTCAAACCGCTATTCTGGACGTACACTATTCC
AGCATGACTCCAAGCAAAGCTCCTTTGACCTGCAGCGATCATACGTACCT
CCTGGAGATACCACAGTCACACCAGCCACAGTAGAGGAGCATCCCGGTGA
CCAAACCGGCAGCGCTGCAGTCGGGGCCAAGCTTCGCCCCGAACCCCCCA
AGATTCGACGAAGCTACTCCGATACAAAGCGGTCCTTGGATGGCTTGGTT
CGCCAACCCTCGTCAGCACGGTCATCGCCCGCGACTTCATCAACACAGCT
GGTGACTCCTGCCAGACCTGCCCCTCCCAAGCTGAAGCTCCCCGATGAGA
GCTTCATTCACCCGTTATTCCGCTCCGACAGCTCATCGCCACCCCCAACC
CCAATGCCAGGTACCACGGTGATTGCCTCACCAGCAGCCGGCCAGACCAT
TTCCGTGCAGGCCTTGAACCGGGTCAGATCTACTCGTTCGCTCCGATCCC
AAGCACCACGCAGCAGATCGCCGCTGTTCGATCAACCCCTCAACGGGATG
GAACGGAACACCGAGTCCCCGGAACCCAGCGGTCGAGGGTCTCCGATGCC
CAGCTTCATCATGGCGGCAGATGTGCGGAGCAGTATATCACGGTATGAAA
AGAAATATGATCTGAACGAATCACCGGATGAGAGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006913-T1.utr5p1 | KJC3_006913-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006913-T1.utr3p1 | KJC3_006913-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:835293..837495 + |
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