|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:920641..922701- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006937-T1 ID=KJC3_006937-T1|Name=KJC3_006937-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2061bp|location=Sequence derived from alignment at ch5:920641..922701- (Aspergillus niger KJC3)
ATGTCCGAGTCACCGAAGTCCGAGAAATACATGTGCCTGACCAGGTTCAG
CACCCCGGTCCCCGAATTGGATGATCATCGATTTCAATTAGATGCGCCAC
GCCTGGAAGCCACCCCCGATGTCCCGCTGAGTCGGCAAAATACCGTCCCG
CAGGCTTTCAACCCCGAGACGCCCCAGCGCCCAGACTTGCTTAACATCGA
GGATGCGCTTCGGGAAGCTGGCTCTCTATCGCGTGATTTCGAAACCGCGG
TAGTGGATGATGATCGATCAGACAAGGATTTCAATGCTATGGGACGTCGC
TTTTCAGTTGATCCCACGGGGAACATCCGCCACGGCCGTACCTATAGTCG
CACGCATCAGGATATTGCGAACTTGTCGCGCGAGTCGTCTGTGTCCGCTC
GGTCGACGTCTCCGCCCAACTCGGTTGAAGCATTCGCAGACCCGCGTCGC
CGGGAGCGTGCGAATACTTTGGAAAGCCATGCTGCTCCAGATTTGGAAGC
CATTCTCCAGCGCACGGTATCTGGTGGCACACATCCTCGCCGCCCGACCT
TCAGCAACGCGAGTGTGGTTAGGCCGCAGCCTGGAGATTTAACTTTGGAG
CCAACCGATGATGGCTGTCTGCCGACGTTTGAACAGCCTGGCAGGATTCC
AGTGATCGACTACGAGGAACTGGAGGAGTTCGTTGCTCTCAACCAAAAGG
CGAAACCTTCCGCAAACCGGCGCAAGCACAGCGTCAGCTCGCAAAGCCAG
AAGCCGCGGGTGTTTTATGACCTTCGTCCAGGTGCTCAGAAGTCCGAGAA
GGACGTGGAGAAGCGTTCGTCAAGCATTGAGCGTTCGTCAGAAGACATTT
TGGAGTCCAGTTTGGAGAAGGATGACAAGAAGGATTTTTCTGAAGTTGTC
AACGAAAAAGAACTGTTGGCAACCCTAAAAAACGCGAATGAGCCTACTCG
CTTCGGATTCTTTTCGTCGGAGGCACAGAGTACCGTGCATGCTGCCGAGC
TGGGTGACCTGGTTTTGCCGGGAGACACTTTCCGAGACCTTTTCCAATTG
GGCCCGGACGGAGGTGTCTGGTGGCTTGATGTCTTGAACCCCACTGAGGA
TGAGGTGGGCGCTCTGTCCAGAGCTTTCTCTATCCATCCTTTGACAACAG
AGGATATCTTGACTCAGGAAGCGCGCGAGAAAGTCGAGCTCTTCAAGCAG
TATTACTTTGTCTGTTTCCGGACATTCTACCAGGTGGACAAGGCGGACGA
GCGTTTCATGGAGCCAGTCAATTTCTATATGGTCGTTTTCCGTGATGGGG
TGCTTTCGTTCTCTTTCACCGACAACCCTCACGCCGCTAACGTCCGGAGG
AGAATTGGAAAGCTCCGTGACTATGTATCGCTGAGTAGTGACTGGATCTG
TTATGCCATGATGTAAGTTTGTACAAGCACTTTGAGATGATGAGTGTTTC
GCTTGGACCAGTCTTGCTAATTCCCATATAGCGACGATATCGTTGATAGT
TTTGGGCCCGTCATTCGGGAAATTGAGGTCGAGTCCGAGGCCATTGAGGA
TCTCGTGTTCATTGCGCGTATGGATGACTTCGAGTCATTCTTGCCGCGCA
TCGGTGGCCTGCGCAAGAAAGTCATGAGTCTGATGCGTCTGCTAGGAGGC
AAGGCGGATGTCATCCGGGGCTTCTCCAAGCGCTGCAACGAGCAGTACTC
GGTGACGCCGCGTGGCGATATCGGTCTCTACCTGGGTGACATTCAGGATC
ACGTCGTAACCATGATGTCCAACCTGGCGCACTTTGAGAAGATGCTTAGC
CGCTCGCATACCAACTATCTTGCGCAGCTGAACGTGACTAATTTGATGCT
GGGCAATCACGTCAACAAAGTTCTGAGCAAGGTGACGCTCATTGCCACCA
TGCTGGTCCCCATGAACCTGATCTGCGGTCTCTTCGGAATGAACGTTCGC
GTCCCTGGGCAAGATGCGGCAGGACTCGGCTGGTTCTTTGGGATTCTTGG
GGTCATCGCAGCTATTGTCATTCTCAGTGGAGTGGTGGCTCGCTGCTACA
AGCTTGTATAA back to topCoding sequence (CDS) from alignment at ch5:920641..922701- >KJC3_006937-T1 ID=KJC3_006937-T1|Name=KJC3_006937-T1|organism=Aspergillus niger KJC3|type=CDS|length=3984bp|location=Sequence derived from alignment at ch5:920641..922701- (Aspergillus niger KJC3)
CGACGATATCGTTGATAGTTTTGGGCCCGTCATTCGGGAAATTGAGGTCG
AGTCCGAGGCCATTGAGGATCTCGTGTTCATTGCGCGTATGGATGACTTC
GAGTCATTCTTGCCGCGCATCGGTGGCCTGCGCAAGAAAGTCATGAGTCT
GATGCGTCTGCTAGGAGGCAAGGCGGATGTCATCCGGGGCTTCTCCAAGC
GCTGCAACGAGCAGTACTCGGTGACGCCGCGTGGCGATATCGGTCTCTAC
CTGGGTGACATTCAGGATCACGTCGTAACCATGATGTCCAACCTGGCGCA
CTTTGAGAAGATGCTTAGCCGCTCGCATACCAACTATCTTGCGCAGCTGA
ACGTGACTAATTTGATGCTGGGCAATCACGTCAACAAAGTTCTGAGCAAG
GTGACGCTCATTGCCACCATGCTGGTCCCCATGAACCTGATCTGCGGTCT
CTTCGGAATGAACGTTCGCGTCCCTGGGCAAGATGCGGCAGGACTCGGCT
GGTTCTTTGGGATTCTTGGGGTCATCGCAGCTATTGTCATTCTCAGTGGA
GTGGTGGCTCGCTGCTACAAGCTTGTATAAATGTCCGAGTCACCGAAGTC
CGAGAAATACATGTGCCTGACCAGGTTCAGCACCCCGGTCCCCGAATTGG
ATGATCATCGATTTCAATTAGATGCGCCACGCCTGGAAGCCACCCCCGAT
GTCCCGCTGAGTCGGCAAAATACCGTCCCGCAGGCTTTCAACCCCGAGAC
GCCCCAGCGCCCAGACTTGCTTAACATCGAGGATGCGCTTCGGGAAGCTG
GCTCTCTATCGCGTGATTTCGAAACCGCGGTAGTGGATGATGATCGATCA
GACAAGGATTTCAATGCTATGGGACGTCGCTTTTCAGTTGATCCCACGGG
GAACATCCGCCACGGCCGTACCTATAGTCGCACGCATCAGGATATTGCGA
ACTTGTCGCGCGAGTCGTCTGTGTCCGCTCGGTCGACGTCTCCGCCCAAC
TCGGTTGAAGCATTCGCAGACCCGCGTCGCCGGGAGCGTGCGAATACTTT
GGAAAGCCATGCTGCTCCAGATTTGGAAGCCATTCTCCAGCGCACGGTAT
CTGGTGGCACACATCCTCGCCGCCCGACCTTCAGCAACGCGAGTGTGGTT
AGGCCGCAGCCTGGAGATTTAACTTTGGAGCCAACCGATGATGGCTGTCT
GCCGACGTTTGAACAGCCTGGCAGGATTCCAGTGATCGACTACGAGGAAC
TGGAGGAGTTCGTTGCTCTCAACCAAAAGGCGAAACCTTCCGCAAACCGG
CGCAAGCACAGCGTCAGCTCGCAAAGCCAGAAGCCGCGGGTGTTTTATGA
CCTTCGTCCAGGTGCTCAGAAGTCCGAGAAGGACGTGGAGAAGCGTTCGT
CAAGCATTGAGCGTTCGTCAGAAGACATTTTGGAGTCCAGTTTGGAGAAG
GATGACAAGAAGGATTTTTCTGAAGTTGTCAACGAAAAAGAACTGTTGGC
AACCCTAAAAAACGCGAATGAGCCTACTCGCTTCGGATTCTTTTCGTCGG
AGGCACAGAGTACCGTGCATGCTGCCGAGCTGGGTGACCTGGTTTTGCCG
GGAGACACTTTCCGAGACCTTTTCCAATTGGGCCCGGACGGAGGTGTCTG
GTGGCTTGATGTCTTGAACCCCACTGAGGATGAGGTGGGCGCTCTGTCCA
GAGCTTTCTCTATCCATCCTTTGACAACAGAGGATATCTTGACTCAGGAA
GCGCGCGAGAAAGTCGAGCTCTTCAAGCAGTATTACTTTGTCTGTTTCCG
GACATTCTACCAGGTGGACAAGGCGGACGAGCGTTTCATGGAGCCAGTCA
ATTTCTATATGGTCGTTTTCCGTGATGGGGTGCTTTCGTTCTCTTTCACC
GACAACCCTCACGCCGCTAACGTCCGGAGGAGAATTGGAAAGCTCCGTGA
CTATGTATCGCTGAGTAGTGACTGGATCTGTTATGCCATGATCGACGATA
TCGTTGATAGTTTTGGGCCCGTCATTCGGGAAATTGAGGTCGAGTCCGAG
GCCATTGAGGATCTCGTGTTCATTGCGCGTATGGATGACTTCGAGTCATT
CTTGCCGCGCATCGGTGGCCTGCGCAAGAAAGTCATGAGTCTGATGCGTC
TGCTAGGAGGCAAGGCGGATGTCATCCGGGGCTTCTCCAAGCGCTGCAAC
GAGCAGTACTCGGTGACGCCGCGTGGCGATATCGGTCTCTACCTGGGTGA
CATTCAGGATCACGTCGTAACCATGATGTCCAACCTGGCGCACTTTGAGA
AGATGCTTAGCCGCTCGCATACCAACTATCTTGCGCAGCTGAACGTGACT
AATTTGATGCTGGGCAATCACGTCAACAAAGTTCTGAGCAAGGTGACGCT
CATTGCCACCATGCTGGTCCCCATGAACCTGATCTGCGGTCTCTTCGGAA
TGAACGTTCGCGTCCCTGGGCAAGATGCGGCAGGACTCGGCTGGTTCTTT
GGGATTCTTGGGGTCATCGCAGCTATTGTCATTCTCAGTGGAGTGGTGGC
TCGCTGCTACAAGCTTGTATAAATGTCCGAGTCACCGAAGTCCGAGAAAT
ACATGTGCCTGACCAGGTTCAGCACCCCGGTCCCCGAATTGGATGATCAT
CGATTTCAATTAGATGCGCCACGCCTGGAAGCCACCCCCGATGTCCCGCT
GAGTCGGCAAAATACCGTCCCGCAGGCTTTCAACCCCGAGACGCCCCAGC
GCCCAGACTTGCTTAACATCGAGGATGCGCTTCGGGAAGCTGGCTCTCTA
TCGCGTGATTTCGAAACCGCGGTAGTGGATGATGATCGATCAGACAAGGA
TTTCAATGCTATGGGACGTCGCTTTTCAGTTGATCCCACGGGGAACATCC
GCCACGGCCGTACCTATAGTCGCACGCATCAGGATATTGCGAACTTGTCG
CGCGAGTCGTCTGTGTCCGCTCGGTCGACGTCTCCGCCCAACTCGGTTGA
AGCATTCGCAGACCCGCGTCGCCGGGAGCGTGCGAATACTTTGGAAAGCC
ATGCTGCTCCAGATTTGGAAGCCATTCTCCAGCGCACGGTATCTGGTGGC
ACACATCCTCGCCGCCCGACCTTCAGCAACGCGAGTGTGGTTAGGCCGCA
GCCTGGAGATTTAACTTTGGAGCCAACCGATGATGGCTGTCTGCCGACGT
TTGAACAGCCTGGCAGGATTCCAGTGATCGACTACGAGGAACTGGAGGAG
TTCGTTGCTCTCAACCAAAAGGCGAAACCTTCCGCAAACCGGCGCAAGCA
CAGCGTCAGCTCGCAAAGCCAGAAGCCGCGGGTGTTTTATGACCTTCGTC
CAGGTGCTCAGAAGTCCGAGAAGGACGTGGAGAAGCGTTCGTCAAGCATT
GAGCGTTCGTCAGAAGACATTTTGGAGTCCAGTTTGGAGAAGGATGACAA
GAAGGATTTTTCTGAAGTTGTCAACGAAAAAGAACTGTTGGCAACCCTAA
AAAACGCGAATGAGCCTACTCGCTTCGGATTCTTTTCGTCGGAGGCACAG
AGTACCGTGCATGCTGCCGAGCTGGGTGACCTGGTTTTGCCGGGAGACAC
TTTCCGAGACCTTTTCCAATTGGGCCCGGACGGAGGTGTCTGGTGGCTTG
ATGTCTTGAACCCCACTGAGGATGAGGTGGGCGCTCTGTCCAGAGCTTTC
TCTATCCATCCTTTGACAACAGAGGATATCTTGACTCAGGAAGCGCGCGA
GAAAGTCGAGCTCTTCAAGCAGTATTACTTTGTCTGTTTCCGGACATTCT
ACCAGGTGGACAAGGCGGACGAGCGTTTCATGGAGCCAGTCAATTTCTAT
ATGGTCGTTTTCCGTGATGGGGTGCTTTCGTTCTCTTTCACCGACAACCC
TCACGCCGCTAACGTCCGGAGGAGAATTGGAAAGCTCCGTGACTATGTAT
CGCTGAGTAGTGACTGGATCTGTTATGCCATGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF01544 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:920641..922701 - |
|
