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KJC3_006942-T1, KJC3_006942-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006942-T1
Unique NameKJC3_006942-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:935039..936705+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006942-T1 ID=KJC3_006942-T1|Name=KJC3_006942-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1667bp|location=Sequence derived from alignment at ch5:935039..936705+ (Aspergillus niger KJC3)
ATGGCGAATGCGTGAGTATCTCCCTTTTATTGAAACACACCTGGCCACGT
CTCCCGAGAATCCAAGTTCAGCGGTTGACGCTTTTCTAAACCATCCACAG
CATCGGCTCAGCATGGCGGTCCTTTTGGCATACGATGACTTCTTATGATC
GCCATGCTTCCCATGACTCGCCGTATCGAACCGGTAAACATGTGCCTCTT
AGTCAAAGTCGACATGAGCCTCTCACATCCATTGCAACAAGCGCTATCGA
ATCTCGACCGGATCTGACTTCCCCGTATGATGACGATCAGCCGAAAGGCT
CAAATGGCTGGTCCGGCTCCCCTACGGGAGGGGGCTCGCCCAATCGCCCA
TACTCTCCTGGAATGCGATCACTGTCATCTCAGAAGCGTCAATCCGCAGA
TCCCAATGCGGATGGTGCTCCGGAGATCCAGATGCAAAGTTTCCATGATG
GTGCACCGCCCCCTCCACCCATCGCTCATTCATGGAGGAAGATTGAGAAA
TGGCTGGAAAATAATTACCAGGAGCTTTGGGATAATCTATGTGAGGGCTG
CACCCAAAATGACATTAACGAACTGGAGCACGAACTGGACTGCAGCCTAC
CGTTGGAACTGCGGGAATCTTTGATGGTCCATGATGGTCAGGAGCGGGGA
GGGTTGCCCACCGGTGTCATCTTTGGCTGCATGCTTCTGGACTGTGAGGA
GATCGTTCAAGAATGGAAGAACTGGAGGGTAGTCAACGAGGAGTTTTTGA
GCTCGTCTATGATGAACGCTCCTTCAAGGCCAACTCCCAGTTCATCGTCC
GCCGTGCCCCCTGCCCCGGGTGCTAATGGTGCGTGGAGAAATGATCTGCT
CGAGCGACAGGACTCGCAGCCCCCCGGTGCAGTCCAGAAGGCCTATGCTC
ATCCGGCTTGGATTCCCCTGGCTCGCGACTGGGGCGGCAACCATATCGCT
ATCGACTTGGCCCCAGGACCTGCTGGAAAGTGGGGACAGGTTATCATCTT
TGGCCGGGACTACGATTGTAAATACGTTGTTGCTCGGTCCTGGTCTGCCT
TCCTTGCTACACTAGCAGATGATATTTGCAGTGGCAAAGTTTCTGTGGAT
GAAGAGACGAATGAGATGAAGCTTTTGGAGTTCAAGTCGCAAAACGTGGA
ACCCCCCTACTTGGAGATCTTGAGGTGGAGGGCCGATCAGAAGTACGGCA
GGAGACAACCTAGGCGCAAGGCTCCGAATGGCCTGGGATTGAGTACGGGT
GGCAAGTCGGGCAAAGAGTCACCCTATGGCAGCCCAACGCCCAGTGAAGA
GCGTGGAAGGTCGCCGCATCGCTTCCCCAACCGGGGGTCTACTCAAAGTC
CTAAGACTCAATTCGGCATGTCAAGTCCGCTGGCTCGCGTCACAGAAGAG
GCACCGAGCCCGGTACACACTGTTGAGGAGACTGGGCTTCCAGAAAAGGC
CGCTAAGGAGAACGAGGAAGAGCGTTCATCCGAAGACTTGATGGAGGTAG
CCACGCCTCAAATCGGCGGAAAAGAGAACGAGGGAGCCGGAAAGAGTGAG
GAGGAGCGCCAGTCATTGGAAGCGGACAAGGCGCAAAAGCGTGATTCGAA
TCAATTGTCTTCGGCCACTGGCTTGGACGCCGAGGTCTTGGGTGAAATGA
AAAATGTTGCGATCTAG
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Coding sequence (CDS) from alignment at ch5:935039..936705+

>KJC3_006942-T1 ID=KJC3_006942-T1|Name=KJC3_006942-T1|organism=Aspergillus niger KJC3|type=CDS|length=3156bp|location=Sequence derived from alignment at ch5:935039..936705+ (Aspergillus niger KJC3)
ATGGCGAATGCCATCGGCTCAGCATGGCGGTCCTTTTGGCATACGATGAC
TTCTTATGATCGCCATGCTTCCCATGACTCGCCGTATCGAACCGGTAAAC
ATGTGCCTCTTAGTCAAAGTCGACATGAGCCTCTCACATCCATTGCAACA
AGCGCTATCGAATCTCGACCGGATCTGACTTCCCCGTATGATGACGATCA
GCCGAAAGGCTCAAATGGCTGGTCCGGCTCCCCTACGGGAGGGGGCTCGC
CCAATCGCCCATACTCTCCTGGAATGCGATCACTGTCATCTCAGAAGCGT
CAATCCGCAGATCCCAATGCGGATGGTGCTCCGGAGATCCAGATGCAAAG
TTTCCATGATGGTGCACCGCCCCCTCCACCCATCGCTCATTCATGGAGGA
AGATTGAGAAATGGCTGGAAAATAATTACCAGGAGCTTTGGGATAATCTA
TGTGAGGGCTGCACCCAAAATGACATTAACGAACTGGAGCACGAACTGGA
CTGCAGCCTACCGTTGGAACTGCGGGAATCTTTGATGGTCCATGATGGTC
AGGAGCGGGGAGGGTTGCCCACCGGTGTCATCTTTGGCTGCATGCTTCTG
GACTGTGAGGAGATCGTTCAAGAATGGAAGAACTGGAGGGTAGTCAACGA
GGAGTTTTTGAGCTCGTCTATGATGAACGCTCCTTCAAGGCCAACTCCCA
GTTCATCGTCCGCCGTGCCCCCTGCCCCGGGTGCTAATGGTGCGTGGAGA
AATGATCTGCTCGAGCGACAGGACTCGCAGCCCCCCGGTGCAGTCCAGAA
GGCCTATGCTCATCCGGCTTGGATTCCCCTGGCTCGCGACTGGGGCGGCA
ACCATATCGCTATCGACTTGGCCCCAGGACCTGCTGGAAAGTGGGGACAG
GTTATCATCTTTGGCCGGGACTACGATTGTAAATACGTTGTTGCTCGGTC
CTGGTCTGCCTTCCTTGCTACACTAGCAGATGATATTTGCAGTGGCAAAG
TTTCTGTGGATGAAGAGACGAATGAGATGAAGCTTTTGGAGTTCAAGTCG
CAAAACGTGGAACCCCCCTACTTGGAGATCTTGAGGTGGAGGGCCGATCA
GAAGTACGGCAGGAGACAACCTAGGCGCAAGGCTCCGAATGGCCTGGGAT
TGAGTACGGGTGGCAAGTCGGGCAAAGAGTCACCCTATGGCAGCCCAACG
CCCAGTGAAGAGCGTGGAAGGTCGCCGCATCGCTTCCCCAACCGGGGGTC
TACTCAAAGTCCTAAGACTCAATTCGGCATGTCAAGTCCGCTGGCTCGCG
TCACAGAAGAGGCACCGAGCCCGGTACACACTGTTGAGGAGACTGGGCTT
CCAGAAAAGGCCGCTAAGGAGAACGAGGAAGAGCGTTCATCCGAAGACTT
GATGGAGGTAGCCACGCCTCAAATCGGCGGAAAAGAGAACGAGGGAGCCG
GAAAGAGTGAGGAGGAGCGCCAGTCATTGGAAGCGGACAAGGCGCAAAAG
CGTGATTCGAATCAATTGTCTTCGGCCACTGGCTTGGACGCCGAGGTCTT
GGGTGAAATGAAAAATGTTGCGATCTAGATGGCGAATGCCATCGGCTCAG
CATGGCGGTCCTTTTGGCATACGATGACTTCTTATGATCGCCATGCTTCC
CATGACTCGCCGTATCGAACCGGTAAACATGTGCCTCTTAGTCAAAGTCG
ACATGAGCCTCTCACATCCATTGCAACAAGCGCTATCGAATCTCGACCGG
ATCTGACTTCCCCGTATGATGACGATCAGCCGAAAGGCTCAAATGGCTGG
TCCGGCTCCCCTACGGGAGGGGGCTCGCCCAATCGCCCATACTCTCCTGG
AATGCGATCACTGTCATCTCAGAAGCGTCAATCCGCAGATCCCAATGCGG
ATGGTGCTCCGGAGATCCAGATGCAAAGTTTCCATGATGGTGCACCGCCC
CCTCCACCCATCGCTCATTCATGGAGGAAGATTGAGAAATGGCTGGAAAA
TAATTACCAGGAGCTTTGGGATAATCTATGTGAGGGCTGCACCCAAAATG
ACATTAACGAACTGGAGCACGAACTGGACTGCAGCCTACCGTTGGAACTG
CGGGAATCTTTGATGGTCCATGATGGTCAGGAGCGGGGAGGGTTGCCCAC
CGGTGTCATCTTTGGCTGCATGCTTCTGGACTGTGAGGAGATCGTTCAAG
AATGGAAGAACTGGAGGGTAGTCAACGAGGAGTTTTTGAGCTCGTCTATG
ATGAACGCTCCTTCAAGGCCAACTCCCAGTTCATCGTCCGCCGTGCCCCC
TGCCCCGGGTGCTAATGGTGCGTGGAGAAATGATCTGCTCGAGCGACAGG
ACTCGCAGCCCCCCGGTGCAGTCCAGAAGGCCTATGCTCATCCGGCTTGG
ATTCCCCTGGCTCGCGACTGGGGCGGCAACCATATCGCTATCGACTTGGC
CCCAGGACCTGCTGGAAAGTGGGGACAGGTTATCATCTTTGGCCGGGACT
ACGATTGTAAATACGTTGTTGCTCGGTCCTGGTCTGCCTTCCTTGCTACA
CTAGCAGATGATATTTGCAGTGGCAAAGTTTCTGTGGATGAAGAGACGAA
TGAGATGAAGCTTTTGGAGTTCAAGTCGCAAAACGTGGAACCCCCCTACT
TGGAGATCTTGAGGTGGAGGGCCGATCAGAAGTACGGCAGGAGACAACCT
AGGCGCAAGGCTCCGAATGGCCTGGGATTGAGTACGGGTGGCAAGTCGGG
CAAAGAGTCACCCTATGGCAGCCCAACGCCCAGTGAAGAGCGTGGAAGGT
CGCCGCATCGCTTCCCCAACCGGGGGTCTACTCAAAGTCCTAAGACTCAA
TTCGGCATGTCAAGTCCGCTGGCTCGCGTCACAGAAGAGGCACCGAGCCC
GGTACACACTGTTGAGGAGACTGGGCTTCCAGAAAAGGCCGCTAAGGAGA
ACGAGGAAGAGCGTTCATCCGAAGACTTGATGGAGGTAGCCACGCCTCAA
ATCGGCGGAAAAGAGAACGAGGGAGCCGGAAAGAGTGAGGAGGAGCGCCA
GTCATTGGAAGCGGACAAGGCGCAAAAGCGTGATTCGAATCAATTGTCTT
CGGCCACTGGCTTGGACGCCGAGGTCTTGGGTGAAATGAAAAATGTTGCG
ATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042546cell wall biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006942KJC3_006942Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006942-T1.exon1KJC3_006942-T1.exon1Aspergillus niger KJC3exon
KJC3_006942-T1.exon2KJC3_006942-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006942-T1.cdsKJC3_006942-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006942-T1KJC3_006942-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009203
DBxrefInterPro:IPR018958
DBxrefPFAM:PF09346
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:935039..936705 +
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