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KJC3_006945-T1, KJC3_006945-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006945-T1
Unique NameKJC3_006945-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:941840..943656+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006945-T1 ID=KJC3_006945-T1|Name=KJC3_006945-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1817bp|location=Sequence derived from alignment at ch5:941840..943656+ (Aspergillus niger KJC3)
ATCGGTAACATATATATATAATCTGTACTGTACACTATTCCTACCTGAAA
AAGAGAACCCCCTCCCCCCTTCCAGATCCATCCCTAATATCAACTCTCTC
CGGCCCCTAATAACACCCTGACATACCCTAAAACACCAGACAAAAAAGAA
GGAAGGGAAGGGAAAAAAAAGGAAAAGAAAGAATGCCCAAGTCCAAAAAA
GCTGGGGTCTCATCCCCAGCAGGCCAGCAACAGCAACAGCATCCAAAAAA
GCATCGCAAAATGGCATCATTTGCCAAGCTTTCGACTACCACAACTACGA
ACCCTGCAAAGCCTAAAGCCGCTCAGAGTGCTCATCACCAACCTGGGTCG
GGTAATGCTAAAAACAGCAACAATGATCGGAAGATGAAGAATTCACAGCA
GCAGCAGCAACAGCTGCAGAAGAATCAGCGGCCTATTGTGCCTTTTGGGA
GAAAGGATCGGATTTTGTTGGTTGGGGAAGGTGAGTTGGGTTCATCCTTT
CTTCCCATTCTACTTTCATGTGCCCTTCTTCCGGTTCGATCGATGCATGC
GTTGCCTTATACATTCTTGATACTTGCTTTTGTGCCTTTCTTTTCCCTTG
TCCCCCGGCTCCCGGAGAGTAAATGCTCATGGTCTGCGGGCCAAGCTCAC
GTTGGCCTTTGTCTACATCCTACTTGCTATTCCAGCATCGGGGAAGGGGG
GACCTGCCCCAGAGAACCATGTCATAAAGTTGTCTTGTTGGACCGCAGTC
CTAACTAGATTGGTGTAGGCGACTTCTCCTTTGCCCGCTCATTAGTCCTC
CAGCACCGTTGCAAGAATGTCATGGCTACCTGCTATGATTCCAAAGACAC
GCTCCACAGCAAATACCCCAAAGCTGGAAATAACATCCACGATATACAGT
ATGCATTTTCCAAGGCGACGACGGAGGAGCTTGCTTCGGACAGTAAGGAG
ATTTCTTCCATCGGCGGCGATGCAGGAATTGTGGAAACCAATGCACAAGG
GTTCCTTGAGGACCAGGCGCAACGTCGTGGACCCAAAGTCATTTACTCAG
TTGACGCTCGAAAACTCGGTCTTCCTGCGGGTGGCGGTAAAGAAATTCGG
ACAGGCTTTCCACGACAGGAGCGAAGACGCCCGGCCTGGAAAGAAGCAAA
GAGCGGCGCCTCATCTGCACCACAAGGTGGGCCGTGGGATGTGATTTGCT
TCAACTTCCCCCATGTCGGCGGTATCTCCACCGACGTCAATCGGCAGGTG
CGAGCCAACCAGGAACTCTTGGTGGCGTTCTTCAAAGCGTGTGTGCCTTT
GTTGTCTCATCGCCCCGAGCGCGTAGATAGTGATGATGAAGACGACTGGG
ATAACTGGGAGGGTTCTGGAGTTGAATCAAGCGGGGGTGAGAACGATCAT
GATAGCAGTGGAGACGGCAACCAACTGCGAACAGCCAATACCACGGGGCA
GGCGACATGCCGAAATAGAGTGGAACCAGGTCAAATTCTAGTGTCGATGT
TTGAGGGTGAGCCTTACACCCTTTGGAATATCAAAGACCTTGCAAGGCAT
GCTGGCTTGCAAGTGGTCACCAGTTTTCGATTTCCGTGGGCCTCTTATAA
GGAGTATTCCCATGCACGGACGCTGGGCGACATTGAAGGAAAGGACGGTG
GAAGAGGCGGCTGGAGGGGGGAAGATAGGGACGCGAGAATGTACGTCTTT
GAGGTCAAACATGAAGACCATCCGGTGATGAGAAGGAACGCCCCATCTTC
CAAAGCTGGGCAGAGTGCGAGAAAGAAGAGGCCAAGAGATGCATCCGACA
GCGACGACAGCGAATAG
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Coding sequence (CDS) from alignment at ch5:941840..943656+

>KJC3_006945-T1 ID=KJC3_006945-T1|Name=KJC3_006945-T1|organism=Aspergillus niger KJC3|type=CDS|length=2694bp|location=Sequence derived from alignment at ch5:941840..943656+ (Aspergillus niger KJC3)
ATGCCCAAGTCCAAAAAAGCTGGGGTCTCATCCCCAGCAGGCCAGCAACA
GCAACAGCATCCAAAAAAGCATCGCAAAATGGCATCATTTGCCAAGCTTT
CGACTACCACAACTACGAACCCTGCAAAGCCTAAAGCCGCTCAGAGTGCT
CATCACCAACCTGGGTCGGGTAATGCTAAAAACAGCAACAATGATCGGAA
GATGAAGAATTCACAGCAGCAGCAGCAACAGCTGCAGAAGAATCAGCGGC
CTATTGTGCCTTTTGGGAGAAAGGATCGGATTTTGTTGGTTGGGGAAGGC
GACTTCTCCTTTGCCCGCTCATTAGTCCTCCAGCACCGTTGCAAGAATGT
CATGGCTACCTGCTATGATTCCAAAGACACGCTCCACAGCAAATACCCCA
AAGCTGGAAATAACATCCACGATATACAGTATGCATTTTCCAAGGCGACG
ACGGAGGAGCTTGCTTCGGACAGTAAGGAGATTTCTTCCATCGGCGGCGA
TGCAGGAATTGTGGAAACCAATGCACAAGGGTTCCTTGAGGACCAGGCGC
AACGTCGTGGACCCAAAGTCATTTACTCAGTTGACGCTCGAAAACTCGGT
CTTCCTGCGGGTGGCGGTAAAGAAATTCGGACAGGCTTTCCACGACAGGA
GCGAAGACGCCCGGCCTGGAAAGAAGCAAAGAGCGGCGCCTCATCTGCAC
CACAAGGTGGGCCGTGGGATGTGATTTGCTTCAACTTCCCCCATGTCGGC
GGTATCTCCACCGACGTCAATCGGCAGGTGCGAGCCAACCAGGAACTCTT
GGTGGCGTTCTTCAAAGCGTGTGTGCCTTTGTTGTCTCATCGCCCCGAGC
GCGTAGATAGTGATGATGAAGACGACTGGGATAACTGGGAGGGTTCTGGA
GTTGAATCAAGCGGGGGTGAGAACGATCATGATAGCAGTGGAGACGGCAA
CCAACTGCGAACAGCCAATACCACGGGGCAGGCGACATGCCGAAATAGAG
TGGAACCAGGTCAAATTCTAGTGTCGATGTTTGAGGGTGAGCCTTACACC
CTTTGGAATATCAAAGACCTTGCAAGGCATGCTGGCTTGCAAGTGGTCAC
CAGTTTTCGATTTCCGTGGGCCTCTTATAAGGAGTATTCCCATGCACGGA
CGCTGGGCGACATTGAAGGAAAGGACGGTGGAAGAGGCGGCTGGAGGGGG
GAAGATAGGGACGCGAGAATGTACGTCTTTGAGGTCAAACATGAAGACCA
TCCGGTGATGAGAAGGAACGCCCCATCTTCCAAAGCTGGGCAGAGTGCGA
GAAAGAAGAGGCCAAGAGATGCATCCGACAGCGACGACAGCGAATAGATG
CCCAAGTCCAAAAAAGCTGGGGTCTCATCCCCAGCAGGCCAGCAACAGCA
ACAGCATCCAAAAAAGCATCGCAAAATGGCATCATTTGCCAAGCTTTCGA
CTACCACAACTACGAACCCTGCAAAGCCTAAAGCCGCTCAGAGTGCTCAT
CACCAACCTGGGTCGGGTAATGCTAAAAACAGCAACAATGATCGGAAGAT
GAAGAATTCACAGCAGCAGCAGCAACAGCTGCAGAAGAATCAGCGGCCTA
TTGTGCCTTTTGGGAGAAAGGATCGGATTTTGTTGGTTGGGGAAGGCGAC
TTCTCCTTTGCCCGCTCATTAGTCCTCCAGCACCGTTGCAAGAATGTCAT
GGCTACCTGCTATGATTCCAAAGACACGCTCCACAGCAAATACCCCAAAG
CTGGAAATAACATCCACGATATACAGTATGCATTTTCCAAGGCGACGACG
GAGGAGCTTGCTTCGGACAGTAAGGAGATTTCTTCCATCGGCGGCGATGC
AGGAATTGTGGAAACCAATGCACAAGGGTTCCTTGAGGACCAGGCGCAAC
GTCGTGGACCCAAAGTCATTTACTCAGTTGACGCTCGAAAACTCGGTCTT
CCTGCGGGTGGCGGTAAAGAAATTCGGACAGGCTTTCCACGACAGGAGCG
AAGACGCCCGGCCTGGAAAGAAGCAAAGAGCGGCGCCTCATCTGCACCAC
AAGGTGGGCCGTGGGATGTGATTTGCTTCAACTTCCCCCATGTCGGCGGT
ATCTCCACCGACGTCAATCGGCAGGTGCGAGCCAACCAGGAACTCTTGGT
GGCGTTCTTCAAAGCGTGTGTGCCTTTGTTGTCTCATCGCCCCGAGCGCG
TAGATAGTGATGATGAAGACGACTGGGATAACTGGGAGGGTTCTGGAGTT
GAATCAAGCGGGGGTGAGAACGATCATGATAGCAGTGGAGACGGCAACCA
ACTGCGAACAGCCAATACCACGGGGCAGGCGACATGCCGAAATAGAGTGG
AACCAGGTCAAATTCTAGTGTCGATGTTTGAGGGTGAGCCTTACACCCTT
TGGAATATCAAAGACCTTGCAAGGCATGCTGGCTTGCAAGTGGTCACCAG
TTTTCGATTTCCGTGGGCCTCTTATAAGGAGTATTCCCATGCACGGACGC
TGGGCGACATTGAAGGAAAGGACGGTGGAAGAGGCGGCTGGAGGGGGGAA
GATAGGGACGCGAGAATGTACGTCTTTGAGGTCAAACATGAAGACCATCC
GGTGATGAGAAGGAACGCCCCATCTTCCAAAGCTGGGCAGAGTGCGAGAA
AGAAGAGGCCAAGAGATGCATCCGACAGCGACGACAGCGAATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006945KJC3_006945Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006945-T1.utr5p1KJC3_006945-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006945-T1.exon1KJC3_006945-T1.exon1Aspergillus niger KJC3exon
KJC3_006945-T1.exon2KJC3_006945-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006945-T1.cdsKJC3_006945-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006945-T1KJC3_006945-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263W48
DBxrefInterPro:IPR019446
DBxrefPFAM:PF10354
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:941840..943656 +
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