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KJC3_006948-T1, KJC3_006948-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006948-T1
Unique NameKJC3_006948-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:947651..949393-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006948-T1 ID=KJC3_006948-T1|Name=KJC3_006948-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1743bp|location=Sequence derived from alignment at ch5:947651..949393- (Aspergillus niger KJC3)
CATTAACCCAATTTTGTTGTTGTTAAAACAACTCTGAACGCCGCGTCCCT
TTCGGTGACACTGAATGATGTGTCTTGAATAGTATCTGTACTCAGATCAC
AGGATTATAACCGTGACTGCTCATCATAGCAGCTTCCTTGCAATCACAAT
GGACCAGTTTTGGGCTGCTCCTCCTGTTACTAGGTACGCCACATCACTCG
TGTTTGATATCAGGACCCATAACTGACTCTCTTTTAGAACACTCACTGCA
CTTACCTTTCTACAGTCTATACTGGTACATGGTGGCCTTCTCAGCGGTTA
CTATGTACTGTTCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGATAT
GGAGGCTGTTCTCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTGATC
TTTGATCTCTACTTTAGTATGGCTTTTGCGCTGTTCCGATGAACGGGCGT
GCTAACTGCCGGTAGTGTTTACCTATGGCAGTCGCCTGGAGACTGAATCT
CCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTAGC
CTCCATCATCATGGTAAGTTGTGGGAACATCCCAGTCTCATCTGCAAGCG
ATGACTTCGACCCTCGTTGTCTCCCAATCTTGCTCTGCGCCTATCTTTGT
TATTGTTGTCATTTCTTTTTTTCATCTGTTTACTTGCCACCTCGTATATC
TGCCCGCCCAGCGCAGCATCAGCTGAAGCGGTTCCTGGAAACGAGGGAGA
TCGCCCCTGCATCCCGTATAGCTCCACAACTGATTTTTACCGGAGCTATA
TGCGTTGTGGGTATGGTGGGACGACCAGTGAGATAGCTAGTGTGATGAAC
CTGTTCACACTGGTGGTTATGGTGCCCTACATCTCTATAACTATATATCC
TATTGATTTGTCACTATTTTCATAGACCCTTCCTGCTTTCCAATGTAGCC
TCCTTGAATTGCCAGTACTGACAGCCCAAAGCTCACGGCAGGTTGTCTAT
TGAATAGTGTAATTTTCACTTCTGGTGAGCTTGCCGTGGTACCAAAATTA
TGCTTGCCTATACTGATATTTTCTCGACTCAGCGTTGATCATGGCTTTCG
TTTACACGTATTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCATC
GTCCAAATACCCGTCGAGTTCTTGCCATGGGCAATGCTCACATTAACGCT
GGTCGTTTCCGGATGGCCTGCGGCGTTAAGGGACGGCATGGGCATAGTAG
CTGCCCACTTCTACGATTTTCTTACCCGTATTTATCCAACTTTCGGAGGT
GGTAAGAATTACCTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCTGC
TCGCAAGCCGCGGAGCGAACCTCGCGCCTTTGGGACCGCCTACCGTGCGA
CGGACCAGGCCCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGAGC
CCTTGGAGCAGAAGAGGGCCAGGAAGAAGACTTGGTGGTGACTGAATAAG
GCACGTCGTTCCTGCCAGGTTGAGCAGTCGCTCCAAGTCCAGTGGGGAGG
TCAGCTCAAGCGCGCAATGTTTAATGCAGTCGTATTTAGCTCGATGCTGG
ATGAGCCAAGGGCTCAATGCAATACGACTGTCAACTTCTTGCAAAGCTTT
CCAAGTCGTTCCGATGCTTAGAATCCTTATTAAAAGAGAAGTAGCAGATA
CTTGAGTAGGCACGCAAGTAGACCAATACCTACTATACCACCA
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Coding sequence (CDS) from alignment at ch5:947651..949393-

>KJC3_006948-T1 ID=KJC3_006948-T1|Name=KJC3_006948-T1|organism=Aspergillus niger KJC3|type=CDS|length=3840bp|location=Sequence derived from alignment at ch5:947651..949393- (Aspergillus niger KJC3)
CGTTGATCATGGCTTTCGTTTACACGTATTCCCAAGACAACCGAGGGAGA
AAGGCGAGCTTTTTCATCGTCCAAATACCCGTCGAGTTCTTGCCATGGGC
AATGCTCACATTAACGCTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGG
ACGGCATGGGCATAGTAGCTGCCCACTTCTACGATTTTCTTACCCGTATT
TATCCAACTTTCGGAGGTGGTAAGAATTACCTCGTCACTCCAGAATTTGT
GAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTG
GGACCGCCTACCGTGCGACGGACCAGGCCCAGGGTTCTTCGGGAAGTTGG
GCTTCGTCTTTTCAGAGCCCTTGGAGCAGAAGAGGGCCAGGAAGAAGACT
TGGTGGTGACTGACTCACGGCAGGTTGTCTATTGAATAGTGTAATTTTCA
CTTCTGTGTTTACCTATGGCAGTCGCCTGGAGACTGAATCTCCCCGGTTC
AGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTAGCCTCCATCAT
CATGAACACTCACTGCACTTACCTTTCTACAGTCTATACTGGTACATGGT
GGCCTTCTCAGCGGTTACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAA
GACTCTACCAGAGATATGGAGGCTGTTCTCGCCGTTTATGATCACTGGAC
CAGGCCTTTCCCTGATCTTTGATCTCTACTTTAATGGACCAGTTTTGGGC
TGCTCCTCCTGTTACTAGCGTTGATCATGGCTTTCGTTTACACGTATTCC
CAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCATCGTCCAAATACCCGT
CGAGTTCTTGCCATGGGCAATGCTCACATTAACGCTGGTCGTTTCCGGAT
GGCCTGCGGCGTTAAGGGACGGCATGGGCATAGTAGCTGCCCACTTCTAC
GATTTTCTTACCCGTATTTATCCAACTTTCGGAGGTGGTAAGAATTACCT
CGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGA
GCGAACCTCGCGCCTTTGGGACCGCCTACCGTGCGACGGACCAGGCCCAG
GGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCAGAAG
AGGGCCAGGAAGAAGACTTGGTGGTGACTGACTCACGGCAGGTTGTCTAT
TGAATAGTGTAATTTTCACTTCTGTGTTTACCTATGGCAGTCGCCTGGAG
ACTGAATCTCCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTC
CTTCGTAGCCTCCATCATCATGAACACTCACTGCACTTACCTTTCTACAG
TCTATACTGGTACATGGTGGCCTTCTCAGCGGTTACTATGTACTGTTCCT
TCGTCGCCTTGTCTTCAAGACTCTACCAGAGATATGGAGGCTGTTCTCGC
CGTTTATGATCACTGGACCAGGCCTTTCCCTGATCTTTGATCTCTACTTT
AATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAGCGTTGATCATGGCT
TTCGTTTACACGTATTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTT
CATCGTCCAAATACCCGTCGAGTTCTTGCCATGGGCAATGCTCACATTAA
CGCTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGGACGGCATGGGCATA
GTAGCTGCCCACTTCTACGATTTTCTTACCCGTATTTATCCAACTTTCGG
AGGTGGTAAGAATTACCTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTG
CTGCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTGGGACCGCCTACCGT
GCGACGGACCAGGCCCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCA
GAGCCCTTGGAGCAGAAGAGGGCCAGGAAGAAGACTTGGTGGTGACTGAC
TCACGGCAGGTTGTCTATTGAATAGTGTAATTTTCACTTCTGTGTTTACC
TATGGCAGTCGCCTGGAGACTGAATCTCCCCGGTTCAGTGCACCCGGTGA
TTTTTTCACTTATGTGTCCTTCGTAGCCTCCATCATCATGAACACTCACT
GCACTTACCTTTCTACAGTCTATACTGGTACATGGTGGCCTTCTCAGCGG
TTACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGA
TATGGAGGCTGTTCTCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTG
ATCTTTGATCTCTACTTTAATGGACCAGTTTTGGGCTGCTCCTCCTGTTA
CTAGCGTTGATCATGGCTTTCGTTTACACGTATTCCCAAGACAACCGAGG
GAGAAAGGCGAGCTTTTTCATCGTCCAAATACCCGTCGAGTTCTTGCCAT
GGGCAATGCTCACATTAACGCTGGTCGTTTCCGGATGGCCTGCGGCGTTA
AGGGACGGCATGGGCATAGTAGCTGCCCACTTCTACGATTTTCTTACCCG
TATTTATCCAACTTTCGGAGGTGGTAAGAATTACCTCGTCACTCCAGAAT
TTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGAGCGAACCTCGCGCC
TTTGGGACCGCCTACCGTGCGACGGACCAGGCCCAGGGTTCTTCGGGAAG
TTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCAGAAGAGGGCCAGGAAGAA
GACTTGGTGGTGACTGACTCACGGCAGGTTGTCTATTGAATAGTGTAATT
TTCACTTCTGTGTTTACCTATGGCAGTCGCCTGGAGACTGAATCTCCCCG
GTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTAGCCTCCA
TCATCATGAACACTCACTGCACTTACCTTTCTACAGTCTATACTGGTACA
TGGTGGCCTTCTCAGCGGTTACTATGTACTGTTCCTTCGTCGCCTTGTCT
TCAAGACTCTACCAGAGATATGGAGGCTGTTCTCGCCGTTTATGATCACT
GGACCAGGCCTTTCCCTGATCTTTGATCTCTACTTTAATGGACCAGTTTT
GGGCTGCTCCTCCTGTTACTAGCGTTGATCATGGCTTTCGTTTACACGTA
TTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCATCGTCCAAATAC
CCGTCGAGTTCTTGCCATGGGCAATGCTCACATTAACGCTGGTCGTTTCC
GGATGGCCTGCGGCGTTAAGGGACGGCATGGGCATAGTAGCTGCCCACTT
CTACGATTTTCTTACCCGTATTTATCCAACTTTCGGAGGTGGTAAGAATT
ACCTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCG
CGGAGCGAACCTCGCGCCTTTGGGACCGCCTACCGTGCGACGGACCAGGC
CCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCA
GAAGAGGGCCAGGAAGAAGACTTGGTGGTGACTGACTCACGGCAGGTTGT
CTATTGAATAGTGTAATTTTCACTTCTGTGTTTACCTATGGCAGTCGCCT
GGAGACTGAATCTCCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATG
TGTCCTTCGTAGCCTCCATCATCATGAACACTCACTGCACTTACCTTTCT
ACAGTCTATACTGGTACATGGTGGCCTTCTCAGCGGTTACTATGTACTGT
TCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGATATGGAGGCTGTTC
TCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTGATCTTTGATCTCTA
CTTTAATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006948KJC3_006948Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006948-T1KJC3_006948-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006948-T1.cdsKJC3_006948-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006948-T1.utr3p1KJC3_006948-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006948-T1.exon5KJC3_006948-T1.exon5Aspergillus niger KJC3exon
KJC3_006948-T1.exon4KJC3_006948-T1.exon4Aspergillus niger KJC3exon
KJC3_006948-T1.exon3KJC3_006948-T1.exon3Aspergillus niger KJC3exon
KJC3_006948-T1.exon2KJC3_006948-T1.exon2Aspergillus niger KJC3exon
KJC3_006948-T1.exon1KJC3_006948-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006948-T1.utr5p1KJC3_006948-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007599
DBxrefPFAM:PF04511
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:947651..949393 -
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