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KJC3_006949-T1, KJC3_006949-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006949-T1
Unique NameKJC3_006949-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:949942..951118-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006949-T1 ID=KJC3_006949-T1|Name=KJC3_006949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1177bp|location=Sequence derived from alignment at ch5:949942..951118- (Aspergillus niger KJC3)
ATGCGCATGTTCAGTTTGGATTCCAGACGGATGCGACTATTACTGCGTTC
ATGGCAGCAGCAGCAACAACAGCAACAACAATGGCGGATACTGCCGGCTT
CATTACGTGCATGCTCGTCTCTTTCCGAAAGGCTACATCGAGATTTGACA
TCACGACGCCTTCCCTTGACTTTTGATTATCTACATCCCCAGCCGTCATA
CCTCCTGAGCTTAACTTTGGCCGAACTTCTTCCCACGCTAACCCCAGCGT
CAAATGAGCTTCCTTCCGCACACAGCAGATTTCCCGTGCCAGCAGGCCAC
CATCTAGTCTACTTCCCTCCCCAGGTCACGTTGTCGCAGATCCTTCCAGA
CGGTACAGACACCTTACATGCCCCAGGGAGTCCCTTTGATCGGCGCTTGT
GGGCTGGTGGAAGTGTCAGATTCTCCACTCCAAACGGCCTGGTTCTCAAT
GGCAGCCGCGCCGTTTGTATCGAAACTATTCGTGACGTGGTGATGAAGGG
CCGGTCAGGCGAAGAAAAGGTTATGGTCAGAATTGAAAGGCGGATCGGCG
CAGTTCAAGAGGGCGAAGACCATCGCAATATTAGAGAGCGGATATGGAAG
GAAGCCGAGGAAGACGTTGGCGATGCTTGTGTCATTGAGACTAGGAATCT
ATTGTTCATGCGCAAGAAGACTCCCGAGCAATTAAGTCATGACAAGGCTG
GTTTTGACATGGAAAATAGGGCTATAAGATGTGCGAGATTCCTCGAAGAT
TGCCAGTCACTAAATCTTTGCTAACGGTGCTCGGTGGCGCGTAGCACCCT
CAGGTTCATACTTTCTCCACAGACTCATACCTAACAAAACCCTGCTGTTC
CGCTTCTCGGCTCTTACTTTCAACGCTCATTCTATACATATCGACAAAAC
CTACACACAAGACGTTGAAGGCTACCGCAACCTTCTCGTACATGGGCCGT
TGACTTTGGCGTTGCTTCTCGCGGCTCTGCAGGGCCATCTGAGTAAGTTT
GAATTGGCTGTCACGCACATTGAGTATAGGAACATAGCTCCTCTATATGT
TGATGAGGAGTTGGCAGTATGCGGCAAACCCAAATCCGGAAAAGGCTACG
CAATCTGGGATGTTTGGATTGAGGGCAGGGACGGACGACTTGCCGTCCGA
GGCACCGCTTTCACTAGCCCCTTGTAG
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Coding sequence (CDS) from alignment at ch5:949942..951118-

>KJC3_006949-T1 ID=KJC3_006949-T1|Name=KJC3_006949-T1|organism=Aspergillus niger KJC3|type=CDS|length=2226bp|location=Sequence derived from alignment at ch5:949942..951118- (Aspergillus niger KJC3)
CACCCTCAGGTTCATACTTTCTCCACAGACTCATACCTAACAAAACCCTG
CTGTTCCGCTTCTCGGCTCTTACTTTCAACGCTCATTCTATACATATCGA
CAAAACCTACACACAAGACGTTGAAGGCTACCGCAACCTTCTCGTACATG
GGCCGTTGACTTTGGCGTTGCTTCTCGCGGCTCTGCAGGGCCATCTGAGT
AAGTTTGAATTGGCTGTCACGCACATTGAGTATAGGAACATAGCTCCTCT
ATATGTTGATGAGGAGTTGGCAGTATGCGGCAAACCCAAATCCGGAAAAG
GCTACGCAATCTGGGATGTTTGGATTGAGGGCAGGGACGGACGACTTGCC
GTCCGAGGCACCGCTTTCACTAGCCCCTTGTAGATGCGCATGTTCAGTTT
GGATTCCAGACGGATGCGACTATTACTGCGTTCATGGCAGCAGCAGCAAC
AACAGCAACAACAATGGCGGATACTGCCGGCTTCATTACGTGCATGCTCG
TCTCTTTCCGAAAGGCTACATCGAGATTTGACATCACGACGCCTTCCCTT
GACTTTTGATTATCTACATCCCCAGCCGTCATACCTCCTGAGCTTAACTT
TGGCCGAACTTCTTCCCACGCTAACCCCAGCGTCAAATGAGCTTCCTTCC
GCACACAGCAGATTTCCCGTGCCAGCAGGCCACCATCTAGTCTACTTCCC
TCCCCAGGTCACGTTGTCGCAGATCCTTCCAGACGGTACAGACACCTTAC
ATGCCCCAGGGAGTCCCTTTGATCGGCGCTTGTGGGCTGGTGGAAGTGTC
AGATTCTCCACTCCAAACGGCCTGGTTCTCAATGGCAGCCGCGCCGTTTG
TATCGAAACTATTCGTGACGTGGTGATGAAGGGCCGGTCAGGCGAAGAAA
AGGTTATGGTCAGAATTGAAAGGCGGATCGGCGCAGTTCAAGAGGGCGAA
GACCATCGCAATATTAGAGAGCGGATATGGAAGGAAGCCGAGGAAGACGT
TGGCGATGCTTGTGTCATTGAGACTAGGAATCTATTGTTCATGCGCAAGA
AGACTCCCGAGCAATTAAGTCATGACAAGGCTGGTTTTGACATGGAAAAT
AGGGCTATAAGATCACCCTCAGGTTCATACTTTCTCCACAGACTCATACC
TAACAAAACCCTGCTGTTCCGCTTCTCGGCTCTTACTTTCAACGCTCATT
CTATACATATCGACAAAACCTACACACAAGACGTTGAAGGCTACCGCAAC
CTTCTCGTACATGGGCCGTTGACTTTGGCGTTGCTTCTCGCGGCTCTGCA
GGGCCATCTGAGTAAGTTTGAATTGGCTGTCACGCACATTGAGTATAGGA
ACATAGCTCCTCTATATGTTGATGAGGAGTTGGCAGTATGCGGCAAACCC
AAATCCGGAAAAGGCTACGCAATCTGGGATGTTTGGATTGAGGGCAGGGA
CGGACGACTTGCCGTCCGAGGCACCGCTTTCACTAGCCCCTTGTAGATGC
GCATGTTCAGTTTGGATTCCAGACGGATGCGACTATTACTGCGTTCATGG
CAGCAGCAGCAACAACAGCAACAACAATGGCGGATACTGCCGGCTTCATT
ACGTGCATGCTCGTCTCTTTCCGAAAGGCTACATCGAGATTTGACATCAC
GACGCCTTCCCTTGACTTTTGATTATCTACATCCCCAGCCGTCATACCTC
CTGAGCTTAACTTTGGCCGAACTTCTTCCCACGCTAACCCCAGCGTCAAA
TGAGCTTCCTTCCGCACACAGCAGATTTCCCGTGCCAGCAGGCCACCATC
TAGTCTACTTCCCTCCCCAGGTCACGTTGTCGCAGATCCTTCCAGACGGT
ACAGACACCTTACATGCCCCAGGGAGTCCCTTTGATCGGCGCTTGTGGGC
TGGTGGAAGTGTCAGATTCTCCACTCCAAACGGCCTGGTTCTCAATGGCA
GCCGCGCCGTTTGTATCGAAACTATTCGTGACGTGGTGATGAAGGGCCGG
TCAGGCGAAGAAAAGGTTATGGTCAGAATTGAAAGGCGGATCGGCGCAGT
TCAAGAGGGCGAAGACCATCGCAATATTAGAGAGCGGATATGGAAGGAAG
CCGAGGAAGACGTTGGCGATGCTTGTGTCATTGAGACTAGGAATCTATTG
TTCATGCGCAAGAAGACTCCCGAGCAATTAAGTCATGACAAGGCTGGTTT
TGACATGGAAAATAGGGCTATAAGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006949KJC3_006949Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006949-T1KJC3_006949-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006949-T1.cdsKJC3_006949-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006949-T1.exon2KJC3_006949-T1.exon2Aspergillus niger KJC3exon
KJC3_006949-T1.exon1KJC3_006949-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR029069
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:949942..951118 -
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