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KJC3_006955-T1, KJC3_006955-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006955-T1
Unique NameKJC3_006955-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:960834..961510-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006955-T1 ID=KJC3_006955-T1|Name=KJC3_006955-T1|organism=Aspergillus niger KJC3|type=mRNA|length=677bp|location=Sequence derived from alignment at ch5:960834..961510- (Aspergillus niger KJC3)
GATTCCGATGGTTGAGCATCATCGGAGACCAGCAAACCATCCCATCTGTT
CTTCATAACCTGTGCTGAGCATACTCGCGATCCATTTTTGAACCAATTTT
CACCATCAAATTCTACCTTTCAGTCTTTTTCACAGAAATCCGCCTGCACC
ATGGATGCACAGACCCAGGTCGATATTAGCAAGCTGAATGATGCCGACAA
GAACGAACTGAGCCAGATGCTGGCAAACGAACAACAAAAGGCCACGATGC
AGCAAAGTGAGTTAATATGACTGAGTCGCTATTCTATGGCCGATTCGTCC
CCGACTTGAGATGCTCCAATGCAATAATGTGCTAATGGTCGTCATTTAGC
CGTCCATTCGTTGTCGGATGTTTGCTGGAAGAAATGTATCACGGGAAAGA
TCTCGTCAGGTCGCCTGGAACAACCCGAGGAATCATGCGCGCAGAACTGT
GTTGAGCGGTGGATGGACTCGAACCTTGCGATTCTGAAGCATCTCGAAGC
CCTGCGTGGATAGATGTATATTTCTTGTCTTCTACTGTCGAAAAGCAGCG
AGCTCATGCATAGAGCACGTCTGCCGCCACCCTGCATGTAAACGGGTACC
TCATGTATTATATCAGTCATACCAATAGAAAGGACGTGCTGGCTTTGCCA
CATGGAATAGCACCGTGAGCGTACCGG
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Coding sequence (CDS) from alignment at ch5:960834..961510-

>KJC3_006955-T1 ID=KJC3_006955-T1|Name=KJC3_006955-T1|organism=Aspergillus niger KJC3|type=CDS|length=540bp|location=Sequence derived from alignment at ch5:960834..961510- (Aspergillus niger KJC3)
CCGTCCATTCGTTGTCGGATGTTTGCTGGAAGAAATGTATCACGGGAAAG
ATCTCGTCAGGTCGCCTGGAACAACCCGAGGAATCATGCGCGCAGAACTG
TGTTGAGCGGTGGATGGACTCGAACCTTGCGATTCTGAAGCATCTCGAAG
CCCTGCGTGGATAGATGGATGCACAGACCCAGGTCGATATTAGCAAGCTG
AATGATGCCGACAAGAACGAACTGAGCCAGATGCTGGCAAACGAACAACA
AAAGGCCACGATGCAGCAAACCGTCCATTCGTTGTCGGATGTTTGCTGGA
AGAAATGTATCACGGGAAAGATCTCGTCAGGTCGCCTGGAACAACCCGAG
GAATCATGCGCGCAGAACTGTGTTGAGCGGTGGATGGACTCGAACCTTGC
GATTCTGAAGCATCTCGAAGCCCTGCGTGGATAGATGGATGCACAGACCC
AGGTCGATATTAGCAAGCTGAATGATGCCGACAAGAACGAACTGAGCCAG
ATGCTGGCAAACGAACAACAAAAGGCCACGATGCAGCAAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006955KJC3_006955Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006955-T1KJC3_006955-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006955-T1.cdsKJC3_006955-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006955-T1.utr3p1KJC3_006955-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006955-T1.exon2KJC3_006955-T1.exon2Aspergillus niger KJC3exon
KJC3_006955-T1.exon1KJC3_006955-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006955-T1.utr5p1KJC3_006955-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004217
DBxrefInterPro:IPR035427
DBxrefPFAM:PF02953
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:960834..961510 -
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