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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:961746..962398+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006956-T1 ID=KJC3_006956-T1|Name=KJC3_006956-T1|organism=Aspergillus niger KJC3|type=mRNA|length=653bp|location=Sequence derived from alignment at ch5:961746..962398+ (Aspergillus niger KJC3)
ATGCCCCCGGTACGGACCTCGCGCAATCGCAAACCGCCCCCGGCAGGCTT
CGATGATATAGAGGATACACTGCTGGAGTTCAGTAATAAGATGAAAGATG
CGGAGAATGCATCGCATGACGGAAAGAAGAAGCACGAGATGCTGTGGCCC
ATATTCCAGATCAGCCATCAGAGTAGGTGGTCTTCCATCCAAGTCATATC
CCAGTTGTCGACCGTTCCAAGTCACTCATAATATGACACACAGGGTCCAG
ATACGTATATGACTTGTACTACGAGAAAGAAGCCATATCAAAACAGCTGT
ACGAATGGCTTCTGAAGAACAACTATGCGGACGCCAACCTGATCGCTAAA
TGGAAGAAGCAAGGCTACGAAAAGGTTACTATCTACCCGTTCTCTACTCT
TGCTCTTATGTCTCCTTCTGTCATTATCCGAGCGATACTACCATGGAGTT
CGCCTGCCAAGACCTGGCATAAGATTAATCTACTAACACGTACCATGTCT
TCAATACAGTTATGCTGCCTCCGGTGCATTCAGACGAAGGAAACGAACTT
TAATGCAACTTGCATCTGCCGGGTACCCAAGGCGCAGCTCAAAGAGGATC
AAACAATTCAATGTGTTAGCTGTGGGTGCCGCGGTTGTGCTAGCAGCGAC
TAG back to topCoding sequence (CDS) from alignment at ch5:961746..962398+ >KJC3_006956-T1 ID=KJC3_006956-T1|Name=KJC3_006956-T1|organism=Aspergillus niger KJC3|type=CDS|length=1341bp|location=Sequence derived from alignment at ch5:961746..962398+ (Aspergillus niger KJC3)
ATGCCCCCGGTACGGACCTCGCGCAATCGCAAACCGCCCCCGGCAGGCTT
CGATGATATAGAGGATACACTGCTGGAGTTCAGTAATAAGATGAAAGATG
CGGAGAATGCATCGCATGACGGAAAGAAGAAGCACGAGATGCTGTGGCCC
ATATTCCAGATCAGCCATCAGAGGTCCAGATACGTATATGACTTGTACTA
CGAGAAAGAAGCCATATCAAAACAGCTGTACGAATGGCTTCTGAAGAACA
ACTATGCGGACGCCAACCTGATCGCTAAATGGAAGAAGCAAGGCTACGAA
AAGTTATGCTGCCTCCGGTGCATTCAGACGAAGGAAACGAACTTTAATGC
AACTTGCATCTGCCGGGTACCCAAGGCGCAGCTCAAAGAGGATCAAACAA
TTCAATGTGTTAGCTGTGGGTGCCGCGGTTGTGCTAGCAGCGACTAGATG
CCCCCGGTACGGACCTCGCGCAATCGCAAACCGCCCCCGGCAGGCTTCGA
TGATATAGAGGATACACTGCTGGAGTTCAGTAATAAGATGAAAGATGCGG
AGAATGCATCGCATGACGGAAAGAAGAAGCACGAGATGCTGTGGCCCATA
TTCCAGATCAGCCATCAGAGGTCCAGATACGTATATGACTTGTACTACGA
GAAAGAAGCCATATCAAAACAGCTGTACGAATGGCTTCTGAAGAACAACT
ATGCGGACGCCAACCTGATCGCTAAATGGAAGAAGCAAGGCTACGAAAAG
TTATGCTGCCTCCGGTGCATTCAGACGAAGGAAACGAACTTTAATGCAAC
TTGCATCTGCCGGGTACCCAAGGCGCAGCTCAAAGAGGATCAAACAATTC
AATGTGTTAGCTGTGGGTGCCGCGGTTGTGCTAGCAGCGACTAGATGCCC
CCGGTACGGACCTCGCGCAATCGCAAACCGCCCCCGGCAGGCTTCGATGA
TATAGAGGATACACTGCTGGAGTTCAGTAATAAGATGAAAGATGCGGAGA
ATGCATCGCATGACGGAAAGAAGAAGCACGAGATGCTGTGGCCCATATTC
CAGATCAGCCATCAGAGGTCCAGATACGTATATGACTTGTACTACGAGAA
AGAAGCCATATCAAAACAGCTGTACGAATGGCTTCTGAAGAACAACTATG
CGGACGCCAACCTGATCGCTAAATGGAAGAAGCAAGGCTACGAAAAGTTA
TGCTGCCTCCGGTGCATTCAGACGAAGGAAACGAACTTTAATGCAACTTG
CATCTGCCGGGTACCCAAGGCGCAGCTCAAAGAGGATCAAACAATTCAAT
GTGTTAGCTGTGGGTGCCGCGGTTGTGCTAGCAGCGACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092652KR |
| DBxref | InterPro:IPR018230 |
| DBxref | InterPro:IPR001748 |
| DBxref | PFAM:PF01125 |
| Product | G10 protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:961746..962398 + |
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