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KJC3_006963-T2, KJC3_006963-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006963-T2
Unique NameKJC3_006963-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:980668..983027-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006963-T2 ID=KJC3_006963-T2|Name=KJC3_006963-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2360bp|location=Sequence derived from alignment at ch5:980668..983027- (Aspergillus niger KJC3)
ACTCTCTTCGCCAGACCCCTCTACCAAACCATCTCCTCATTCCCTCCCCC
ACCCCCTAAACAGCACTGTCACGATGTCTGAGCCCATCAGGAATAAGAAA
GCGGACTTTCCAGTGGCTCCGTAAGAATCCCTTCTTCGAACTACCAACAT
CTCAAACATTTTGGTATGGTATGCTCTTTGATTTCTGACGAGATATGACG
CTTGCAGGACACCACAAAATACCCCGGCCAACAATGCTCCTATTTCTTCT
CATGCCCAGCAACCTGGAATTGCTAGTATCAAAGAAGGTAAGTTTCCTCG
TTTCCTTCAAGATACTTTCTCATACAAACCAAATATAGAGTCTCTTGACC
ACGCTACGGCGGCTTCCCTGTTTGCACGCAACCCCGGGCTCGTTTCCATG
ATTCAGGGAAAACTTGGATCCCTAGTTGGCCGCTCTTCGGGTTACATTGA
ATCCTTACCCGTGTCAGTCCGCCGGCGCGTTGCTGGCCTGAAGGGCATCC
AGAAGGAGCACGCTAAATTGGAAGCCCAGTTTCAGGAAGAGGTACTGGAA
CTTGAGAAGAAATATTTCGCGAAGTTTACTCCGTTGTATCAGAGGCGTTC
CACGATAGTCAACGGAGCCGCAGAGCCTACGGATGGTGAAGTCGAGGCGG
GACAGGGTGATGAAGAGGATGTTGACTCTAAAGATGAGGCTGAAGCCACC
AAAGAAGAGGACCAGGAGTCTCAAATCGCCGGCATACCTGAATTCTGGCT
CTCAGCTATGAAAAACCAGATTTCTCTTGCAGAAATGATCACCGAACGAG
ATGAAGAGGCTTTGAAACATCTCGTCGATATCCGTATGGAATACCTCGAT
CGCCCAGGCTTCCGTCTCATCTTCGAATTCTCGGAGAATGCCTATTTCAC
AAACAAGACTATTTCGAAGACCTACTACTACAAGGAAGAAAACGGCTACG
GCGGTGATTTCATCTACGATCACGCCGAAGGCACTAAGATCGATTGGAAG
GCTGATAAAGATCTCACTGTCCGCATTGAGAGCAAGAAACAGAGAAACAA
GAGTGAGTGTCGAAATAGCATTTATCGAATGTGCACTGTAGCTGACATCG
CCTAGACACGAAACAGACTCGGATTGTCAAAATTACCGTCCCCACGGAGT
CATTTTTCAACTTCTTCTCCCCCCCTCAGCCCCCGACTGACGACGATGAT
ACCGTTGCTACTGATATCGAAGAGCGACTGGAACTTGATTATCAGCTCGG
TGAAGACATCAAGGAGAAGCTTATCCCCAGAGCCATCGACTGGTTCACGG
GAGAGGCCCTTCAGTTCGAAGAGTTGGGTGACGACATGGATGCCGATGAA
TACGACGAGGAGGACGATGAAGACGAGGATGAAGATGATGAAGACGATGA
TGATGAGAGGAGGTCCGACCGGGACGTCGATGATGACTCCGACGAAGAGG
TGCGCATTAATTGATTATCGTTTGCTTATACCGTCTGTCCGTGCTGACAC
CAGAACAGGATGGCGCCTCAAAGCCGAAGAAGGAGGCAGCGGAATGTAAA
CAGAGCTGAGAACGTTCAGCATGGCTCAATAAATCAAGCTCGGAGCATGC
ATGAACCAGTTCATGACGCCTAGCCCTCAAGTGGTGTTTTTTTTTTTTTC
TTTTTTTCTTTTTTTGTTATTTCAATGTTTTTCGCCTTTACTTTATCATA
TTTTATTATTTATTTGTCACTGCTCCACCCCTCAGTCCTTTTGACTTGTC
GTTTCCGCCTAGTAATATTGCCTCAGAATGTCGTCCCAATGTCTTGGGAA
GCGCCTTTGCGGTGCAATTGATCCCTTGGCGTTTCCTTGTTCAAGGCATT
GTGCGCATCGCTAGTCTTGTTGCGTGACACATTTTCTAATCACTTTCTAT
CCATATATTGTGTCCAAGCAACGATTGTGCAGTATGAACATACTCCAGAC
TTGAGAAGTACACAGAGGTCGTATCTCCGCTTGCTCCCTTGATGGCCATG
TGTGGGAAAAGAAAAACAGCACTTCATGGCCAGAGTATCATAATTCCCAT
AGTTGCTAATGAAAGCGCTGATATCTTCCCTTTTTCCAAACCAGCGAGTT
CATACTAGACGGACGAAAAAGCTGCTTTTACCCCCATAGTGGGTAGCATG
GTGCATGGGTCATAGTAATGAGTGGTCCGTCTTAGCTAATCGCTAGTGTT
TCTTCACCGCCTGTTCTGTCACCATCTTCTGTTGATGTAAGTAACACTGT
CTATGCTCTGCAGAGCATCTGCCACAACTTGGACTCGCAGCTGCATATGA
GCTAGAAAATTGTCCGTTTCAGTCATTCTTGTATATGTATGTTTCTGGGG
TAGAGTAGAT
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Coding sequence (CDS) from alignment at ch5:980668..983027-

>KJC3_006963-T2 ID=KJC3_006963-T2|Name=KJC3_006963-T2|organism=Aspergillus niger KJC3|type=CDS|length=6180bp|location=Sequence derived from alignment at ch5:980668..983027- (Aspergillus niger KJC3)
GATGGCGCCTCAAAGCCGAAGAAGGAGGCAGCGGAATGTAAACAGAGCTG
AACACGAAACAGACTCGGATTGTCAAAATTACCGTCCCCACGGAGTCATT
TTTCAACTTCTTCTCCCCCCCTCAGCCCCCGACTGACGACGATGATACCG
TTGCTACTGATATCGAAGAGCGACTGGAACTTGATTATCAGCTCGGTGAA
GACATCAAGGAGAAGCTTATCCCCAGAGCCATCGACTGGTTCACGGGAGA
GGCCCTTCAGTTCGAAGAGTTGGGTGACGACATGGATGCCGATGAATACG
ACGAGGAGGACGATGAAGACGAGGATGAAGATGATGAAGACGATGATGAT
GAGAGGAGGTCCGACCGGGACGTCGATGATGACTCCGACGAAGAGAGTCT
CTTGACCACGCTACGGCGGCTTCCCTGTTTGCACGCAACCCCGGGCTCGT
TTCCATGATTCAGGGAAAACTTGGATCCCTAGTTGGCCGCTCTTCGGGTT
ACATTGAATCCTTACCCGTGTCAGTCCGCCGGCGCGTTGCTGGCCTGAAG
GGCATCCAGAAGGAGCACGCTAAATTGGAAGCCCAGTTTCAGGAAGAGGT
ACTGGAACTTGAGAAGAAATATTTCGCGAAGTTTACTCCGTTGTATCAGA
GGCGTTCCACGATAGTCAACGGAGCCGCAGAGCCTACGGATGGTGAAGTC
GAGGCGGGACAGGGTGATGAAGAGGATGTTGACTCTAAAGATGAGGCTGA
AGCCACCAAAGAAGAGGACCAGGAGTCTCAAATCGCCGGCATACCTGAAT
TCTGGCTCTCAGCTATGAAAAACCAGATTTCTCTTGCAGAAATGATCACC
GAACGAGATGAAGAGGCTTTGAAACATCTCGTCGATATCCGTATGGAATA
CCTCGATCGCCCAGGCTTCCGTCTCATCTTCGAATTCTCGGAGAATGCCT
ATTTCACAAACAAGACTATTTCGAAGACCTACTACTACAAGGAAGAAAAC
GGCTACGGCGGTGATTTCATCTACGATCACGCCGAAGGCACTAAGATCGA
TTGGAAGGCTGATAAAGATCTCACTGTCCGCATTGAGAGCAAGAAACAGA
GAAACAAGAGACACCACAAAATACCCCGGCCAACAATGCTCCTATTTCTT
CTCATGCCCAGCAACCTGGAATTGCTAGTATCAAAGAAGATGTCTGAGCC
CATCAGGAATAAGAAAGCGGACTTTCCAGTGGCTCCGATGGCGCCTCAAA
GCCGAAGAAGGAGGCAGCGGAATGTAAACAGAGCTGAACACGAAACAGAC
TCGGATTGTCAAAATTACCGTCCCCACGGAGTCATTTTTCAACTTCTTCT
CCCCCCCTCAGCCCCCGACTGACGACGATGATACCGTTGCTACTGATATC
GAAGAGCGACTGGAACTTGATTATCAGCTCGGTGAAGACATCAAGGAGAA
GCTTATCCCCAGAGCCATCGACTGGTTCACGGGAGAGGCCCTTCAGTTCG
AAGAGTTGGGTGACGACATGGATGCCGATGAATACGACGAGGAGGACGAT
GAAGACGAGGATGAAGATGATGAAGACGATGATGATGAGAGGAGGTCCGA
CCGGGACGTCGATGATGACTCCGACGAAGAGAGTCTCTTGACCACGCTAC
GGCGGCTTCCCTGTTTGCACGCAACCCCGGGCTCGTTTCCATGATTCAGG
GAAAACTTGGATCCCTAGTTGGCCGCTCTTCGGGTTACATTGAATCCTTA
CCCGTGTCAGTCCGCCGGCGCGTTGCTGGCCTGAAGGGCATCCAGAAGGA
GCACGCTAAATTGGAAGCCCAGTTTCAGGAAGAGGTACTGGAACTTGAGA
AGAAATATTTCGCGAAGTTTACTCCGTTGTATCAGAGGCGTTCCACGATA
GTCAACGGAGCCGCAGAGCCTACGGATGGTGAAGTCGAGGCGGGACAGGG
TGATGAAGAGGATGTTGACTCTAAAGATGAGGCTGAAGCCACCAAAGAAG
AGGACCAGGAGTCTCAAATCGCCGGCATACCTGAATTCTGGCTCTCAGCT
ATGAAAAACCAGATTTCTCTTGCAGAAATGATCACCGAACGAGATGAAGA
GGCTTTGAAACATCTCGTCGATATCCGTATGGAATACCTCGATCGCCCAG
GCTTCCGTCTCATCTTCGAATTCTCGGAGAATGCCTATTTCACAAACAAG
ACTATTTCGAAGACCTACTACTACAAGGAAGAAAACGGCTACGGCGGTGA
TTTCATCTACGATCACGCCGAAGGCACTAAGATCGATTGGAAGGCTGATA
AAGATCTCACTGTCCGCATTGAGAGCAAGAAACAGAGAAACAAGAGACAC
CACAAAATACCCCGGCCAACAATGCTCCTATTTCTTCTCATGCCCAGCAA
CCTGGAATTGCTAGTATCAAAGAAGATGTCTGAGCCCATCAGGAATAAGA
AAGCGGACTTTCCAGTGGCTCCGATGGCGCCTCAAAGCCGAAGAAGGAGG
CAGCGGAATGTAAACAGAGCTGAACACGAAACAGACTCGGATTGTCAAAA
TTACCGTCCCCACGGAGTCATTTTTCAACTTCTTCTCCCCCCCTCAGCCC
CCGACTGACGACGATGATACCGTTGCTACTGATATCGAAGAGCGACTGGA
ACTTGATTATCAGCTCGGTGAAGACATCAAGGAGAAGCTTATCCCCAGAG
CCATCGACTGGTTCACGGGAGAGGCCCTTCAGTTCGAAGAGTTGGGTGAC
GACATGGATGCCGATGAATACGACGAGGAGGACGATGAAGACGAGGATGA
AGATGATGAAGACGATGATGATGAGAGGAGGTCCGACCGGGACGTCGATG
ATGACTCCGACGAAGAGAGTCTCTTGACCACGCTACGGCGGCTTCCCTGT
TTGCACGCAACCCCGGGCTCGTTTCCATGATTCAGGGAAAACTTGGATCC
CTAGTTGGCCGCTCTTCGGGTTACATTGAATCCTTACCCGTGTCAGTCCG
CCGGCGCGTTGCTGGCCTGAAGGGCATCCAGAAGGAGCACGCTAAATTGG
AAGCCCAGTTTCAGGAAGAGGTACTGGAACTTGAGAAGAAATATTTCGCG
AAGTTTACTCCGTTGTATCAGAGGCGTTCCACGATAGTCAACGGAGCCGC
AGAGCCTACGGATGGTGAAGTCGAGGCGGGACAGGGTGATGAAGAGGATG
TTGACTCTAAAGATGAGGCTGAAGCCACCAAAGAAGAGGACCAGGAGTCT
CAAATCGCCGGCATACCTGAATTCTGGCTCTCAGCTATGAAAAACCAGAT
TTCTCTTGCAGAAATGATCACCGAACGAGATGAAGAGGCTTTGAAACATC
TCGTCGATATCCGTATGGAATACCTCGATCGCCCAGGCTTCCGTCTCATC
TTCGAATTCTCGGAGAATGCCTATTTCACAAACAAGACTATTTCGAAGAC
CTACTACTACAAGGAAGAAAACGGCTACGGCGGTGATTTCATCTACGATC
ACGCCGAAGGCACTAAGATCGATTGGAAGGCTGATAAAGATCTCACTGTC
CGCATTGAGAGCAAGAAACAGAGAAACAAGAGACACCACAAAATACCCCG
GCCAACAATGCTCCTATTTCTTCTCATGCCCAGCAACCTGGAATTGCTAG
TATCAAAGAAGATGTCTGAGCCCATCAGGAATAAGAAAGCGGACTTTCCA
GTGGCTCCGATGGCGCCTCAAAGCCGAAGAAGGAGGCAGCGGAATGTAAA
CAGAGCTGAACACGAAACAGACTCGGATTGTCAAAATTACCGTCCCCACG
GAGTCATTTTTCAACTTCTTCTCCCCCCCTCAGCCCCCGACTGACGACGA
TGATACCGTTGCTACTGATATCGAAGAGCGACTGGAACTTGATTATCAGC
TCGGTGAAGACATCAAGGAGAAGCTTATCCCCAGAGCCATCGACTGGTTC
ACGGGAGAGGCCCTTCAGTTCGAAGAGTTGGGTGACGACATGGATGCCGA
TGAATACGACGAGGAGGACGATGAAGACGAGGATGAAGATGATGAAGACG
ATGATGATGAGAGGAGGTCCGACCGGGACGTCGATGATGACTCCGACGAA
GAGAGTCTCTTGACCACGCTACGGCGGCTTCCCTGTTTGCACGCAACCCC
GGGCTCGTTTCCATGATTCAGGGAAAACTTGGATCCCTAGTTGGCCGCTC
TTCGGGTTACATTGAATCCTTACCCGTGTCAGTCCGCCGGCGCGTTGCTG
GCCTGAAGGGCATCCAGAAGGAGCACGCTAAATTGGAAGCCCAGTTTCAG
GAAGAGGTACTGGAACTTGAGAAGAAATATTTCGCGAAGTTTACTCCGTT
GTATCAGAGGCGTTCCACGATAGTCAACGGAGCCGCAGAGCCTACGGATG
GTGAAGTCGAGGCGGGACAGGGTGATGAAGAGGATGTTGACTCTAAAGAT
GAGGCTGAAGCCACCAAAGAAGAGGACCAGGAGTCTCAAATCGCCGGCAT
ACCTGAATTCTGGCTCTCAGCTATGAAAAACCAGATTTCTCTTGCAGAAA
TGATCACCGAACGAGATGAAGAGGCTTTGAAACATCTCGTCGATATCCGT
ATGGAATACCTCGATCGCCCAGGCTTCCGTCTCATCTTCGAATTCTCGGA
GAATGCCTATTTCACAAACAAGACTATTTCGAAGACCTACTACTACAAGG
AAGAAAACGGCTACGGCGGTGATTTCATCTACGATCACGCCGAAGGCACT
AAGATCGATTGGAAGGCTGATAAAGATCTCACTGTCCGCATTGAGAGCAA
GAAACAGAGAAACAAGAGACACCACAAAATACCCCGGCCAACAATGCTCC
TATTTCTTCTCATGCCCAGCAACCTGGAATTGCTAGTATCAAAGAAGATG
TCTGAGCCCATCAGGAATAAGAAAGCGGACTTTCCAGTGGCTCCGATGGC
GCCTCAAAGCCGAAGAAGGAGGCAGCGGAATGTAAACAGAGCTGAACACG
AAACAGACTCGGATTGTCAAAATTACCGTCCCCACGGAGTCATTTTTCAA
CTTCTTCTCCCCCCCTCAGCCCCCGACTGACGACGATGATACCGTTGCTA
CTGATATCGAAGAGCGACTGGAACTTGATTATCAGCTCGGTGAAGACATC
AAGGAGAAGCTTATCCCCAGAGCCATCGACTGGTTCACGGGAGAGGCCCT
TCAGTTCGAAGAGTTGGGTGACGACATGGATGCCGATGAATACGACGAGG
AGGACGATGAAGACGAGGATGAAGATGATGAAGACGATGATGATGAGAGG
AGGTCCGACCGGGACGTCGATGATGACTCCGACGAAGAGAGTCTCTTGAC
CACGCTACGGCGGCTTCCCTGTTTGCACGCAACCCCGGGCTCGTTTCCAT
GATTCAGGGAAAACTTGGATCCCTAGTTGGCCGCTCTTCGGGTTACATTG
AATCCTTACCCGTGTCAGTCCGCCGGCGCGTTGCTGGCCTGAAGGGCATC
CAGAAGGAGCACGCTAAATTGGAAGCCCAGTTTCAGGAAGAGGTACTGGA
ACTTGAGAAGAAATATTTCGCGAAGTTTACTCCGTTGTATCAGAGGCGTT
CCACGATAGTCAACGGAGCCGCAGAGCCTACGGATGGTGAAGTCGAGGCG
GGACAGGGTGATGAAGAGGATGTTGACTCTAAAGATGAGGCTGAAGCCAC
CAAAGAAGAGGACCAGGAGTCTCAAATCGCCGGCATACCTGAATTCTGGC
TCTCAGCTATGAAAAACCAGATTTCTCTTGCAGAAATGATCACCGAACGA
GATGAAGAGGCTTTGAAACATCTCGTCGATATCCGTATGGAATACCTCGA
TCGCCCAGGCTTCCGTCTCATCTTCGAATTCTCGGAGAATGCCTATTTCA
CAAACAAGACTATTTCGAAGACCTACTACTACAAGGAAGAAAACGGCTAC
GGCGGTGATTTCATCTACGATCACGCCGAAGGCACTAAGATCGATTGGAA
GGCTGATAAAGATCTCACTGTCCGCATTGAGAGCAAGAAACAGAGAAACA
AGAGACACCACAAAATACCCCGGCCAACAATGCTCCTATTTCTTCTCATG
CCCAGCAACCTGGAATTGCTAGTATCAAAGAAGATGTCTGAGCCCATCAG
GAATAAGAAAGCGGACTTTCCAGTGGCTCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006963KJC3_006963Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006963-T2KJC3_006963-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006963-T2.cdsKJC3_006963-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006963-T2.utr3p1KJC3_006963-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006963-T2.exon5KJC3_006963-T2.exon5Aspergillus niger KJC3exon
KJC3_006963-T2.exon4KJC3_006963-T2.exon4Aspergillus niger KJC3exon
KJC3_006963-T2.exon3KJC3_006963-T2.exon3Aspergillus niger KJC3exon
KJC3_006963-T2.exon2KJC3_006963-T2.exon2Aspergillus niger KJC3exon
KJC3_006963-T2.exon1KJC3_006963-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006963-T2.utr5p1KJC3_006963-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263ULA
DBxrefInterPro:IPR037231
DBxrefInterPro:IPR002164
DBxrefPFAM:PF00956
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:980668..983027 -
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