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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:998998..1001682- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006970-T1 ID=KJC3_006970-T1|Name=KJC3_006970-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2685bp|location=Sequence derived from alignment at ch5:998998..1001682- (Aspergillus niger KJC3)
CCAAGATATGGTACGTTCCAACGCGATCTCACACCTGCCTCTAAAACAAA
GTCCTCTACATTCTTTTAACACTACAAGAAGATCTGGATGCCACCAACCT
TTATCAAGCGCCTCGCACCCCGCTACGGTTGGGAGATAATAGACTCATGC
GCAGTTGATTGGCATAACTTATCCTAAATGCCCCAGAAAGATACGGCCAG
AAGAGCTTTGGGGAAGTCAAGCCGTTCATCAGCGGAAGCATCCCCTGGCA
CTCGATCGCAAACGCCTAAAGTTACAACTGGACCCCCGACATTGTTTGAC
AAACGCAGTGGATCTGCAGGCCGTCATTTAGCCCAACAGCCTTATACCCC
TTCGAATAGAGGCCCGATTCAATCCGAGCGCAGTCGAAAAAAGAGGAGGT
ATATGCATCCGGAGCAGTCACGGCCAGCCCTTGACCAGAGTGACGTACAC
AATAGCGATGACGCAGCCTCAAACATCCACGAGCCTATATATGATTGTGC
GGCTGATGCTGTGTACAAATTCAATGATATTGAAGGAGGTTCCAGTTCTC
AGAATGAATCCGATATTGAACGCAGAGGATCAGATTACCCTTACACTTCA
GCTACATCTGTATCACGACGGCTTCACATCGAAGAACAACAACCCATCTC
AGACAGTAACACTCCCAGCCAGACTTCGGCGGAAGCTGGGCATGACAGGA
GAACTGTCTCTGCTCGGAAGAGACTGGTTGATATGCTAGGTATATCAGTA
CCGTCCACGGAGACTAGCTCGAGTGATTTTGACTCAGTTGTAGCTGAAAA
CATACATTCAGACAACTCCCGGCCTTCGCAAGAAACCGACAACCCTCGCG
CAAATCAGAGTGAACATCCAGATGAAGTAGCAGATCATAACTCTGAAAAG
GCTATCAAAGCAGAAACTCCGATGCTATCCAGATTACGGGGCTCTAGGAT
CACTTATGCACGCCAACGCTCTTTCTTGGGTAATACTCTGAGCTTGACAG
CTCTTGAACAGCGGGACACTTCGGTACCCTCTCCAGATCCTGGTGATGCA
GATCTGGGACACATCACAAACAATGATGGTAACCAGAATTTGGTTAGTGA
CGACGAAGAGATTGAATCCAGACCTGTGCGTAGCATACATGAGCTTAGAC
AGGCTGGAGATAACGCTCGGTTTCGGGAGTCAGTTGAGGTGATATTTGAA
GACATTGAGGATCCATATAACTCTCTCTCAGGGAAATGTAGTAGCTTCGC
ACAGCTATGCACAAAACTTCTCGAGCATGCCTTCGTGCGTCGTTTCTCAG
AATATGGTTTCAATGAACGGCTTGTCAAGTGCATAGCGGATGACCAAGAC
GTTCTCATTACGTCCATGGCTTTATGTGCATTTAGACTAATATGCTCGAA
TGGCCTTTTCTCTCACACAAGTCTGAGGTCTTTTTGGACCATAATCCTGC
GAATGTCTCACAAGCTCCTCACCATGACCGACGACATCACAAATATGGCA
ACTGAGGGAATCACCGGCCTGTCCAAAACTGTGCAAAGATCTTTCAAAAA
GACCTTACCTCAGATTTCATCCGTGTTTTTCAGTGGGTCCCCTTCGCCGA
GGCTTTCTCCCTGCTTGGTGACCCTTTCGTGCATCCAGTTCTGCCTTTCT
ACCTTCCTTGAAAAGGGTGACGACATTAAGCCTTTGCCCGCGACGCTGAC
GGAACAAATTGTCGAGTTGCTGATAACACAGCGTGACAATGCCGCCTCCA
TAGCGAGACTTGAGAGTTATGAGTTAACAAGGATGTCATTTTTGATTCTG
GAATCTCACTCGATGTTACCGGGAACATCAACGTCTTCTTATCGCAACTT
TTCCCGGCTGCTTTTCGAGAATCATGGTAAATTTCTGCCATACTGTCAGT
TTGATCGGAATAAGCAGATTCAGATGTTATATGCCAGGGTTATTCTCAAC
CTTACAAATAATGCGCCTTCGCTCTGCGAAGAGTTTGCTACTCCTGAGAT
GGTCTCGGACTTTGTCGAACTTGCCACTACTGGATTGTCTGGCACATCCA
TGGATTGCAATGTGGATGAAGATGGACCTTTCAATGCCCCTATCTTAGCT
TTGGGTGTGCTCATAAACTTGTCGGAGCAAAGCGAGCTCTCACGAGCTGC
TTTTCTTAATCCAGCGTCTGATTCTACGTCACTACTTCAGTTACTTCTCC
AGCATTTCTCCGCGGGGCTTACATTTGTTGACCAGGTAAGAGTACAACAC
CCTGGAAAGGAGGAGAAATTGAGCTAATCTAGATAAGGCGCGCTCTGTGT
CCGAAGTGCATTACAATGTTGTTATTGGGTACCTCTCGATTGTCTTGGTT
ACTTTGTGTCTCAACGAGGAAGCATTGAATCAAATCAGGGAGTCGATTCG
TGGCGAAGGCCTTAACCTAGTCTTATCGACGGCAGAAGAATTCTTAAAGT
TCCACCAGAAGGTTGAGCAAGACTCCCAGCTTTTTGAGAGTTCGGGAGAA
CGTGGAGGTAGATCTACAACGCGCTTGAAGGATGTCCTGAATCAGATACG
CCAAAAAGCACGTCTTTAAACGCCGAGATACTTTATATGCAATCTTGATT
CTCATTCAACTCCGTAATTATTCCATATGCAATCTGTAACAACAAAGACC
TATTCTTGCAATGGTCGCTATGAGCGGGCTGCCCA back to topCoding sequence (CDS) from alignment at ch5:998998..1001682- >KJC3_006970-T1 ID=KJC3_006970-T1|Name=KJC3_006970-T1|organism=Aspergillus niger KJC3|type=CDS|length=4092bp|location=Sequence derived from alignment at ch5:998998..1001682- (Aspergillus niger KJC3)
CTGAAAACATACATTCAGACAACTCCCGGCCTTCGCAAGAAACCGACAAC
CCTCGCGCAAATCAGAGTGAACATCCAGATGAAGTAGCAGATCATAACTC
TGAAAAGGCTATCAAAGCAGAAACTCCGATGCTATCCAGATTACGGGGCT
CTAGGATCACTTATGCACGCCAACGCTCTTTCTTGGGTAATACTCTGAGC
TTGACAGCTCTTGAACAGCGGGACACTTCGGTACCCTCTCCAGATCCTGG
TGATGCAGATCTGGGACACATCACAAACAATGATGGTAACCAGAATTTGG
TTAGTGACGACGAAGAGATTGAATCCAGACCTGTGCGTAGCATACATGAG
CTTAGACAGGCTGGAGATAACGCTCGGTTTCGGGAGTCAGTTGAGGTGAT
ATTTGAAGACATTGAGGATCCATATAACTCTCTCTCAGGGAAATGTAGTA
GCTTCGCACAGCTATGCACAAAACTTCTCGAGCATGCCTTCGTGCGTCGT
TTCTCAGAATATGGTTTCAATGAACGGCTTGTCAAGTGCATAGCGGATGA
CCAAGACGTTCTCATTACGTCCATGGCTTTATGTGCATTTAGACTAATAT
GCTCGAATGGCCTTTTCTCTCACACAAGTCTGAGGTCTTTTTGGACCATA
ATCCTGCGAATGTCTCACAAGCTCCTCACCATGACCGACGACATCACAAA
TATGGCAACTGAGGGAATCACCGGCCTGTCCAAAACTGTGCAAAGATCTT
TCAAAAAGACCTTACCTCAGATTTCATCCGTGTTTTTCAGTGGGTCCCCT
TCGCCGAGGCTTTCTCCCTGCTTGGTGACCCTTTCGTGCATCCAGTTCTG
CCTTTCTACCTTCCTTGAAAAGGGTGACGACATTAAGCCTTTGCCCGCGA
CGCTGACGGAACAAATTGTCGAGTTGCTGATAACACAGCGTGACAATGCC
GCCTCCATAGCGAGACTTGAGAGTTATGAGTTAACAAGGATGTCATTTTT
GATTCTGGAATCTCACTCGATGTTACCGGGAACATCAACGTCTTCTTATC
GCAACTTTTCCCGGCTGCTTTTCGAGAATCATGGTAAATTTCTGCCATAC
TGTCAGTTTGATCGGAATAAGCAGATTCAGATGTTATATGCCAGGGTTAT
TCTCAACCTTACAAATAATGCGCCTTCGCTCTGCGAAGAGTTTGCTACTC
CTGAGATGGTCTCGGACTTTGTCGAACTTGCCACTACTGGATTGTCTGGC
ACATCCATGGATTGCAATGTGGATGAAGATGGACCTTTCAATGCCCCTAT
CTTAGCTTTGGGTGTGCTCATAAACTTGTCGGAGCAAAGCGAGCTCTCAC
GAGCTGCTTTTCTTAATCCAGCGTCTGATTCTACGTCACTACTTCAGTTA
CTTCTCCAGCATTTCTCCGCGGGGCTTACATTTGTTGACCAGGTAAGAGT
ACAACACCCTGGAAAGGAGGAGAAATTGAGCTAAATGCCCCAGAAAGATA
CGGCCAGAAGAGCTTTGGGGAAGTCAAGCCGTTCATCAGCGGAAGCATCC
CCTGGCACTCGATCGCAAACGCCTAAAGTTACAACTGGACCCCCGACATT
GTTTGACAAACGCAGTGGATCTGCAGGCCGTCATTTAGCCCAACAGCCTT
ATACCCCTTCGAATAGAGGCCCGATTCAATCCGAGCGCAGTCGAAAAAAG
AGGAGGTATATGCATCCGGAGCAGTCACGGCCAGCCCTTGACCAGAGTGA
CGTACACAATAGCGATGACGCAGCCTCAAACATCCACGAGCCTATATATG
ATTGTGCGGCTGATGCTGTGTACAAATTCAATGATATTGAAGGAGGTTCC
AGTTCTCAGAATGAATCCGATATTGAACGCAGAGGATCAGATTACCCTTA
CACTTCAGCTACATCTGTATCACGACGGCTTCACATCGAAGAACAACAAC
CCATCTCAGACAGTAACACTCCCAGCCAGACTTCGGCGGAAGCTGGGCAT
GACAGGAGAACTGTCTCTGCTCGGAAGAGACTGGTTGATATGCTAGCTGA
AAACATACATTCAGACAACTCCCGGCCTTCGCAAGAAACCGACAACCCTC
GCGCAAATCAGAGTGAACATCCAGATGAAGTAGCAGATCATAACTCTGAA
AAGGCTATCAAAGCAGAAACTCCGATGCTATCCAGATTACGGGGCTCTAG
GATCACTTATGCACGCCAACGCTCTTTCTTGGGTAATACTCTGAGCTTGA
CAGCTCTTGAACAGCGGGACACTTCGGTACCCTCTCCAGATCCTGGTGAT
GCAGATCTGGGACACATCACAAACAATGATGGTAACCAGAATTTGGTTAG
TGACGACGAAGAGATTGAATCCAGACCTGTGCGTAGCATACATGAGCTTA
GACAGGCTGGAGATAACGCTCGGTTTCGGGAGTCAGTTGAGGTGATATTT
GAAGACATTGAGGATCCATATAACTCTCTCTCAGGGAAATGTAGTAGCTT
CGCACAGCTATGCACAAAACTTCTCGAGCATGCCTTCGTGCGTCGTTTCT
CAGAATATGGTTTCAATGAACGGCTTGTCAAGTGCATAGCGGATGACCAA
GACGTTCTCATTACGTCCATGGCTTTATGTGCATTTAGACTAATATGCTC
GAATGGCCTTTTCTCTCACACAAGTCTGAGGTCTTTTTGGACCATAATCC
TGCGAATGTCTCACAAGCTCCTCACCATGACCGACGACATCACAAATATG
GCAACTGAGGGAATCACCGGCCTGTCCAAAACTGTGCAAAGATCTTTCAA
AAAGACCTTACCTCAGATTTCATCCGTGTTTTTCAGTGGGTCCCCTTCGC
CGAGGCTTTCTCCCTGCTTGGTGACCCTTTCGTGCATCCAGTTCTGCCTT
TCTACCTTCCTTGAAAAGGGTGACGACATTAAGCCTTTGCCCGCGACGCT
GACGGAACAAATTGTCGAGTTGCTGATAACACAGCGTGACAATGCCGCCT
CCATAGCGAGACTTGAGAGTTATGAGTTAACAAGGATGTCATTTTTGATT
CTGGAATCTCACTCGATGTTACCGGGAACATCAACGTCTTCTTATCGCAA
CTTTTCCCGGCTGCTTTTCGAGAATCATGGTAAATTTCTGCCATACTGTC
AGTTTGATCGGAATAAGCAGATTCAGATGTTATATGCCAGGGTTATTCTC
AACCTTACAAATAATGCGCCTTCGCTCTGCGAAGAGTTTGCTACTCCTGA
GATGGTCTCGGACTTTGTCGAACTTGCCACTACTGGATTGTCTGGCACAT
CCATGGATTGCAATGTGGATGAAGATGGACCTTTCAATGCCCCTATCTTA
GCTTTGGGTGTGCTCATAAACTTGTCGGAGCAAAGCGAGCTCTCACGAGC
TGCTTTTCTTAATCCAGCGTCTGATTCTACGTCACTACTTCAGTTACTTC
TCCAGCATTTCTCCGCGGGGCTTACATTTGTTGACCAGGTAAGAGTACAA
CACCCTGGAAAGGAGGAGAAATTGAGCTAAATGCCCCAGAAAGATACGGC
CAGAAGAGCTTTGGGGAAGTCAAGCCGTTCATCAGCGGAAGCATCCCCTG
GCACTCGATCGCAAACGCCTAAAGTTACAACTGGACCCCCGACATTGTTT
GACAAACGCAGTGGATCTGCAGGCCGTCATTTAGCCCAACAGCCTTATAC
CCCTTCGAATAGAGGCCCGATTCAATCCGAGCGCAGTCGAAAAAAGAGGA
GGTATATGCATCCGGAGCAGTCACGGCCAGCCCTTGACCAGAGTGACGTA
CACAATAGCGATGACGCAGCCTCAAACATCCACGAGCCTATATATGATTG
TGCGGCTGATGCTGTGTACAAATTCAATGATATTGAAGGAGGTTCCAGTT
CTCAGAATGAATCCGATATTGAACGCAGAGGATCAGATTACCCTTACACT
TCAGCTACATCTGTATCACGACGGCTTCACATCGAAGAACAACAACCCAT
CTCAGACAGTAACACTCCCAGCCAGACTTCGGCGGAAGCTGGGCATGACA
GGAGAACTGTCTCTGCTCGGAAGAGACTGGTTGATATGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006970-T1.utr3p1 | KJC3_006970-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006970-T1.utr5p1 | KJC3_006970-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR011989 |
| DBxref | InterPro:IPR022771 |
| DBxref | PFAM:PF07814 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:998998..1001682 - |
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