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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1002967..1004106+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006971-T1 ID=KJC3_006971-T1|Name=KJC3_006971-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1140bp|location=Sequence derived from alignment at ch5:1002967..1004106+ (Aspergillus niger KJC3)
CACTAACCGTCCCAATGAGGAAAATGTTCAACCCTCGCATATTAATTCCT
TAGCTTTAAATGCCTGCGTTACTTCCTACACTTCAACTCAACCCCACTAC
CTTTGGAACGGTTTACAGTTCGCTGCAGATATCCTTCATTTCTTGTTTCT
TCACCTCTTAGTCGTACTTTGCATCCGTGGAAGAAGGAGGGGGAAAGCTA
CCATAGCCAAGACGAACGAGATGTCAGAAGCCACTCCCTCCCCCGCACAA
GGCGTTGGCCCCATCTACAGACCCGATGGCGAAAAGCCCACAGCGACAGT
ATCAAAGGACATATTTTACGAGAATGTCCACGTTTTACCTCAGTCCCCTC
AGCTGATCGCTCTTTTGACGTAAGATGAAGGCCGAGTCAAATCATACAGG
TTAACACTAGTCAGTATCATATGCTGACACCATTCGTAGCATGATCAGAG
ATAGAAGGACTAGCCGTGCCGATTTCATCTTCTACTCGAACAGGATCATA
CGCCTCCTCGTAGAGGAGGGGCTCAATCACCTGCCAGTGGTTGAACAATC
GGTCACGACACCTGTAGGTCGCGTCTATCTCGGAGTGCGGTTCGAAGGGA
AAATATGTGGTGTTTCCATCATGAGAGCAGGAGAGGCAATGGAGCAGGGT
TTGAGAGATTGTTGTCGTTCTGTGCGAATTGGTAAAATCCTTATACAGAG
GGACGAGGAAACCTGCAAGCCAAAACTGTTCTATGAAAAGCTCCCTGGCG
ACATCGCAAATCGATGGGTTCTTCTTCTTGATCCTATGTTTGCAACAGGC
AAGTTCGTCGAACCAACGCACTAAACGAACTAACATCAACTAGGGGGCTC
GGCAACACTCGCTGTTGAGGTCTTGAAAGCAAAGGGGGTCCCTGAGGACC
GCATTCTGTTTCTTAACCTTATCGCAAGCCCTTCAGGTGTTGCAGATTTC
GCAGAACGCTTTCCCAAACTCAGGGTAGTGACTGCTTTCATAGATCAAGG
CCTAGATGACAAAAAGTGGGTATCTCACGTTATTAAAAAGGAAAAGATAA
AATGATTACATGTACATTGCTGACCAAGGCCATTCTAGATACATAATACC
AGGGCTTGGTGACTTCGGCGACCGCTATTACACGCTGTAG back to topCoding sequence (CDS) from alignment at ch5:1002967..1004106+ >KJC3_006971-T1 ID=KJC3_006971-T1|Name=KJC3_006971-T1|organism=Aspergillus niger KJC3|type=CDS|length=2928bp|location=Sequence derived from alignment at ch5:1002967..1004106+ (Aspergillus niger KJC3)
ATGTCAGAAGCCACTCCCTCCCCCGCACAAGGCGTTGGCCCCATCTACAG
ACCCGATGGCGAAAAGCCCACAGCGACAGTATCAAAGGACATATTTTACG
AGAATGTCCACGTTTTACCTCAGTCCCCTCAGCTGATCGCTCTTTTGACC
ATGATCAGAGATAGAAGGACTAGCCGTGCCGATTTCATCTTCTACTCGAA
CAGGATCATACGCCTCCTCGTAGAGGAGGGGCTCAATCACCTGCCAGTGG
TTGAACAATCGGTCACGACACCTGTAGGTCGCGTCTATCTCGGAGTGCGG
TTCGAAGGGAAAATATGTGGTGTTTCCATCATGAGAGCAGGAGAGGCAAT
GGAGCAGGGTTTGAGAGATTGTTGTCGTTCTGTGCGAATTGGTAAAATCC
TTATACAGAGGGACGAGGAAACCTGCAAGCCAAAACTGTTCTATGAAAAG
CTCCCTGGCGACATCGCAAATCGATGGGTTCTTCTTCTTGATCCTATGTT
TGCAACAGGGGGCTCGGCAACACTCGCTGTTGAGGTCTTGAAAGCAAAGG
GGGTCCCTGAGGACCGCATTCTGTTTCTTAACCTTATCGCAAGCCCTTCA
GGTGTTGCAGATTTCGCAGAACGCTTTCCCAAACTCAGGGTAGTGACTGC
TTTCATAGATCAAGGCCTAGATGACAAAAAATACATAATACCAGGGCTTG
GTGACTTCGGCGACCGCTATTACACGCTGTAGATGTCAGAAGCCACTCCC
TCCCCCGCACAAGGCGTTGGCCCCATCTACAGACCCGATGGCGAAAAGCC
CACAGCGACAGTATCAAAGGACATATTTTACGAGAATGTCCACGTTTTAC
CTCAGTCCCCTCAGCTGATCGCTCTTTTGACCATGATCAGAGATAGAAGG
ACTAGCCGTGCCGATTTCATCTTCTACTCGAACAGGATCATACGCCTCCT
CGTAGAGGAGGGGCTCAATCACCTGCCAGTGGTTGAACAATCGGTCACGA
CACCTGTAGGTCGCGTCTATCTCGGAGTGCGGTTCGAAGGGAAAATATGT
GGTGTTTCCATCATGAGAGCAGGAGAGGCAATGGAGCAGGGTTTGAGAGA
TTGTTGTCGTTCTGTGCGAATTGGTAAAATCCTTATACAGAGGGACGAGG
AAACCTGCAAGCCAAAACTGTTCTATGAAAAGCTCCCTGGCGACATCGCA
AATCGATGGGTTCTTCTTCTTGATCCTATGTTTGCAACAGGGGGCTCGGC
AACACTCGCTGTTGAGGTCTTGAAAGCAAAGGGGGTCCCTGAGGACCGCA
TTCTGTTTCTTAACCTTATCGCAAGCCCTTCAGGTGTTGCAGATTTCGCA
GAACGCTTTCCCAAACTCAGGGTAGTGACTGCTTTCATAGATCAAGGCCT
AGATGACAAAAAATACATAATACCAGGGCTTGGTGACTTCGGCGACCGCT
ATTACACGCTGTAGATGTCAGAAGCCACTCCCTCCCCCGCACAAGGCGTT
GGCCCCATCTACAGACCCGATGGCGAAAAGCCCACAGCGACAGTATCAAA
GGACATATTTTACGAGAATGTCCACGTTTTACCTCAGTCCCCTCAGCTGA
TCGCTCTTTTGACCATGATCAGAGATAGAAGGACTAGCCGTGCCGATTTC
ATCTTCTACTCGAACAGGATCATACGCCTCCTCGTAGAGGAGGGGCTCAA
TCACCTGCCAGTGGTTGAACAATCGGTCACGACACCTGTAGGTCGCGTCT
ATCTCGGAGTGCGGTTCGAAGGGAAAATATGTGGTGTTTCCATCATGAGA
GCAGGAGAGGCAATGGAGCAGGGTTTGAGAGATTGTTGTCGTTCTGTGCG
AATTGGTAAAATCCTTATACAGAGGGACGAGGAAACCTGCAAGCCAAAAC
TGTTCTATGAAAAGCTCCCTGGCGACATCGCAAATCGATGGGTTCTTCTT
CTTGATCCTATGTTTGCAACAGGGGGCTCGGCAACACTCGCTGTTGAGGT
CTTGAAAGCAAAGGGGGTCCCTGAGGACCGCATTCTGTTTCTTAACCTTA
TCGCAAGCCCTTCAGGTGTTGCAGATTTCGCAGAACGCTTTCCCAAACTC
AGGGTAGTGACTGCTTTCATAGATCAAGGCCTAGATGACAAAAAATACAT
AATACCAGGGCTTGGTGACTTCGGCGACCGCTATTACACGCTGTAGATGT
CAGAAGCCACTCCCTCCCCCGCACAAGGCGTTGGCCCCATCTACAGACCC
GATGGCGAAAAGCCCACAGCGACAGTATCAAAGGACATATTTTACGAGAA
TGTCCACGTTTTACCTCAGTCCCCTCAGCTGATCGCTCTTTTGACCATGA
TCAGAGATAGAAGGACTAGCCGTGCCGATTTCATCTTCTACTCGAACAGG
ATCATACGCCTCCTCGTAGAGGAGGGGCTCAATCACCTGCCAGTGGTTGA
ACAATCGGTCACGACACCTGTAGGTCGCGTCTATCTCGGAGTGCGGTTCG
AAGGGAAAATATGTGGTGTTTCCATCATGAGAGCAGGAGAGGCAATGGAG
CAGGGTTTGAGAGATTGTTGTCGTTCTGTGCGAATTGGTAAAATCCTTAT
ACAGAGGGACGAGGAAACCTGCAAGCCAAAACTGTTCTATGAAAAGCTCC
CTGGCGACATCGCAAATCGATGGGTTCTTCTTCTTGATCCTATGTTTGCA
ACAGGGGGCTCGGCAACACTCGCTGTTGAGGTCTTGAAAGCAAAGGGGGT
CCCTGAGGACCGCATTCTGTTTCTTAACCTTATCGCAAGCCCTTCAGGTG
TTGCAGATTTCGCAGAACGCTTTCCCAAACTCAGGGTAGTGACTGCTTTC
ATAGATCAAGGCCTAGATGACAAAAAATACATAATACCAGGGCTTGGTGA
CTTCGGCGACCGCTATTACACGCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006971-T1.utr5p1 | KJC3_006971-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000836 |
| DBxref | InterPro:IPR029057 |
| DBxref | PFAM:PF14681 |
| Product | synthesizes UMP from uracil |
| Product | Uracil phosphoribosyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1002967..1004106 + |
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