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KJC3_006982-T1, KJC3_006982-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006982-T1
Unique NameKJC3_006982-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1115553..1116601+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006982-T1 ID=KJC3_006982-T1|Name=KJC3_006982-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1049bp|location=Sequence derived from alignment at ch5:1115553..1116601+ (Aspergillus niger KJC3)
AAGCATATAAGACCCATACCCAAAAGAGACGGGCACTTGGAGCAGAAGAA
GAGTGAAAATGCAACGCCGTGCAGCACTTACCGGCCTCAGCTATATGCGT
CGCTGCTCAACGTTTACTGGGTTGCGTTATAACTTGCTTCCTGAGCATCA
ACTTCCGCCTTGGACTCAGCATAAGGTAGCACTTCCGTCTAATAAAAGGA
GCTTTTCCAGTTCGCCCTTTTGGTGTAAAAAGAAGGACAAGACGAAAACT
ACATCTGCTGCAGATTCTGCGAAGCCGTTGCCAAAAGCAGGCGCAGGCTC
CGAAGACCCGCATGATTTTTCACAGCTGCATGACGGCATAGCGGCTGCCC
TGTCTCGACTCAGAGACGAACTCTCTAAGATGCGTGTCGGGGGGAGGTTC
AATACCGTATCAATTGAGAGTCTTCGTGTGCAGCTGAGCAAGAGCAGCAA
GCAATCGATCAAGCTGGGCGACCTTGCTCAAGTTGTTCCTAAGGGTGGAC
GAATGGTGACTATCTTGGCCTCTGACGAAGATGTGAGTTACTGGCGCCTT
AAAAGAATGTCTTTGCTATCACGAAGCCTACAGATCCTCTCAATCTTCCA
TTTTTGCTCTAACGCAGACTGTTATCGATATAGCATGTGAAGCCCATTCG
CTCGTCAATAGTCTCCTCCAACTTGTCGTTAACCCCGCAAGCCGACCCTC
ACAACTCCCTTCAGCTCAATGTCACGATCCCCCCACCGACTAAAGAGTCC
CGGGATCAAACGATCGCTATGGCAAAGGCGGCAATGGAGAAAGCTGCCGG
TGCCGTCCGTGATTCACGCAGCGCTGTGCATAAACGTCTTCAGGATCTGC
AGAAAAAGAAGATTGCCAGGCCAGATGACGTTCGGAAGGCCCAGGAACAG
ATGGAAAAGCTTGCAGAGAAAGGGCAGAAGGAGGTGAAGGAACTGTTTGA
GACTACAAGGAAGGCTATGGAGCGGGCGTAATGAGGAATCACGCTGCTGA
AAGTCCAGCTTTGAATGAACTCAAAGCGTGATATGAGTACGAGTTCTGT
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Coding sequence (CDS) from alignment at ch5:1115553..1116601+

>KJC3_006982-T1 ID=KJC3_006982-T1|Name=KJC3_006982-T1|organism=Aspergillus niger KJC3|type=CDS|length=1644bp|location=Sequence derived from alignment at ch5:1115553..1116601+ (Aspergillus niger KJC3)
ATGCAACGCCGTGCAGCACTTACCGGCCTCAGCTATATGCGTCGCTGCTC
AACGTTTACTGGGTTGCGTTATAACTTGCTTCCTGAGCATCAACTTCCGC
CTTGGACTCAGCATAAGGTAGCACTTCCGTCTAATAAAAGGAGCTTTTCC
AGTTCGCCCTTTTGGTGTAAAAAGAAGGACAAGACGAAAACTACATCTGC
TGCAGATTCTGCGAAGCCGTTGCCAAAAGCAGGCGCAGGCTCCGAAGACC
CGCATGATTTTTCACAGCTGCATGACGGCATAGCGGCTGCCCTGTCTCGA
CTCAGAGACGAACTCTCTAAGATGCGTGTCGGGGGGAGGTTCAATACCGT
ATCAATTGAGAGTCTTCGTGTGCAGCTGAGCAAGAGCAGCAAGCAATCGA
TCAAGCTGGGCGACCTTGCTCAAGTTGTTCCTAAGGGTGGACGAATGGTG
ACTATCTTGGCCTCTGACGAAGATCATGTGAAGCCCATTCGCTCGTCAAT
AGTCTCCTCCAACTTGTCGTTAACCCCGCAAGCCGACCCTCACAACTCCC
TTCAGCTCAATGTCACGATCCCCCCACCGACTAAAGAGTCCCGGGATCAA
ACGATCGCTATGGCAAAGGCGGCAATGGAGAAAGCTGCCGGTGCCGTCCG
TGATTCACGCAGCGCTGTGCATAAACGTCTTCAGGATCTGCAGAAAAAGA
AGATTGCCAGGCCAGATGACGTTCGGAAGGCCCAGGAACAGATGGAAAAG
CTTGCAGAGAAAGGGCAGAAGGAGGTGAAGGAACTGTTTGAGACTACAAG
GAAGGCTATGGAGCGGGCGTAAATGCAACGCCGTGCAGCACTTACCGGCC
TCAGCTATATGCGTCGCTGCTCAACGTTTACTGGGTTGCGTTATAACTTG
CTTCCTGAGCATCAACTTCCGCCTTGGACTCAGCATAAGGTAGCACTTCC
GTCTAATAAAAGGAGCTTTTCCAGTTCGCCCTTTTGGTGTAAAAAGAAGG
ACAAGACGAAAACTACATCTGCTGCAGATTCTGCGAAGCCGTTGCCAAAA
GCAGGCGCAGGCTCCGAAGACCCGCATGATTTTTCACAGCTGCATGACGG
CATAGCGGCTGCCCTGTCTCGACTCAGAGACGAACTCTCTAAGATGCGTG
TCGGGGGGAGGTTCAATACCGTATCAATTGAGAGTCTTCGTGTGCAGCTG
AGCAAGAGCAGCAAGCAATCGATCAAGCTGGGCGACCTTGCTCAAGTTGT
TCCTAAGGGTGGACGAATGGTGACTATCTTGGCCTCTGACGAAGATCATG
TGAAGCCCATTCGCTCGTCAATAGTCTCCTCCAACTTGTCGTTAACCCCG
CAAGCCGACCCTCACAACTCCCTTCAGCTCAATGTCACGATCCCCCCACC
GACTAAAGAGTCCCGGGATCAAACGATCGCTATGGCAAAGGCGGCAATGG
AGAAAGCTGCCGGTGCCGTCCGTGATTCACGCAGCGCTGTGCATAAACGT
CTTCAGGATCTGCAGAAAAAGAAGATTGCCAGGCCAGATGACGTTCGGAA
GGCCCAGGAACAGATGGAAAAGCTTGCAGAGAAAGGGCAGAAGGAGGTGA
AGGAACTGTTTGAGACTACAAGGAAGGCTATGGAGCGGGCGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006982KJC3_006982Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006982-T1.utr5p1KJC3_006982-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006982-T1.exon1KJC3_006982-T1.exon1Aspergillus niger KJC3exon
KJC3_006982-T1.exon2KJC3_006982-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006982-T1.cdsKJC3_006982-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006982-T1.utr3p1KJC3_006982-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006982-T1KJC3_006982-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036191
DBxrefInterPro:IPR023584
DBxrefPFAM:PF01765
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1115553..1116601 +
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