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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1200472..1202960+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007008-T1 ID=KJC3_007008-T1|Name=KJC3_007008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2489bp|location=Sequence derived from alignment at ch5:1200472..1202960+ (Aspergillus niger KJC3)
ATGGGCAATTCTCAGGCGAAAGAGAGCCGGCCGCTTGCTTCATCCAGTCG
CCGCAGCCATCACCATGGCCCATACGGTGACCGCCACCATGGTGATGGTT
CTAGGTCGAACCGGGGTAGCCGGCCCGACCTGTCCCTGCTCGGAATAGGC
GGAAGTTCAGAGCGAGATCTGGCGTCGCTCGAACATCGACGAGAAACAAG
ACAGGAACGAGAGGCTCGCCGGCTAGAGAAAGAGCGGGTAGCTCGGCTCA
AGGAGCGGGAGCGTAGTATGAAGGAAGAACATGTGGATGGTGGTTATCTG
GTGACCCAAGGTGTCTATACAGGTCCAGAGGACTTCAACAAGGCTGTGGT
CCGGCAGCTAATGGTGAGTTTGCTTTGCTGCCAATTCTGGCCTTGGAGAG
CCCGGAGCCGATGCTGACTATTTCCTTATAGATCGAACGACGACTTGCGC
CGTTTTGGAGAGGACTGAATGACTTTTCGGACTCGTGGACAGAGCACCAG
CTTATGGCTGCGGCGCGTGGCCTTCCCATTCCCCCTCCCGACGAGATTCC
CCCTGAACTGGAGTATAAGAACCCTCCCAAGGCCGCGGAAGACGCAAAGG
AGGTTTCGGATTCAGCCGCAGTGCAATATTTGATGGTCCCCATTACGTCA
AGATCACAATCATACGGCTCCGACGCTTCCCAGTCATCCACGCCCGCACA
TTCCCTCCCCTCCCCAACATCTCCTATCGCGTCCGGCACATCGAGCTCAC
CACTGTTCAGAGCGCGAGCCAAGACACTTGCGTCGCTAACCACGCCGAAG
CATGGAGTTCAGTCTGATGCGGCTTCACGTGAAATGCAGTTACCCCGTGA
CCCGTTTGTGAACGGACAACCCATTGAAGCTTACCTATATAAAGACGCGG
CGGAATGTCCCATTTGTTTTCTGTACTATCCTCCGTATCTCAATCGGACG
AGGTGTTGCGACCAGCCTATATGCTCCGAATGTTTCGTTCAGATCAAACG
CCCCGACCCTCATCCGCCGGAGCATGGAGACGCTAACCCAGATTCTGCTC
CAGCTGAGGGTGGTGAACAAGCCGAAAGCCAAGACTGCCAGCTAGTGTCA
GAACCCTCGGCATGTCCATTTTGTGTCCAGCCGGAGTTTGGGGTGACATA
TGCGCCCCCGCCGTTCCGGAGAGGGCTAGCGTACGCTTCTGATCCGAGCT
CACGCCCCAATATGGCCTCTCCACTGTCTTCCACATCCTCTCTATCCTCT
GGGAACACCCCCACCACCGGCCGTCGACGCGCGACCTCGTTATCGGCAAA
CGATCCAACCGTGATTACTACCGATAGGATTCGTCCCGACTGGGCTCAAA
AGCTTGCAAATGCCCGAGCTCATGCTGCGCGGCGGTCGGCAGCAGCGACT
GCCCTTCATACTGCGGCTTACTTGATGCACTCTAACGGCGCTGGAAATGA
TTCCCGGATTGGTCTGGGAAGAAGAAGCGTCATGCGGAGAAACGGCGCGC
CAGAAGCTCAGAACTCTAGCGCGCGCACCGGATCCCCGGCGCTGCAGGCG
CTGGCATTCCTCACGGATAGGCGCGCAGCTGGCCACGAAGCCGACTCGGC
GGAAGAAGGGTCCGGTAACATTGCCCCACCTCGTCAGAGCTCGAGGCGGA
ATCGCATAGATGATCTGGAAGAAATGATGATGATGGAGGCGATCCGACTC
AGTCTAGCGAGCGAGGAAGAGCGGCGCAAGAGAGAGGAGAAAGAGGCCAA
GAAAGAGGCAAAGAAAAAGGAGAAGGAAGCCAAGAAGGCAGAAAAGGTTG
CGCGCAAAACCGGGCTCACCAGTAACAATGCGAGCAGCTCCGCCTTGGAT
GTGCTTCCGGATGCGCGGCTAGGTAGGGTCACGAGCAGTTCCTCTTCCAT
TGCGGCTGAGGAGGTTGTATCGGCCGGCAAGGGTAAGGAGGTAGACCGTT
CTGTACCAGCTGGTGGCTCTGCTGCTGAACCCAGTACTGCGGCCGAGGAA
GTGCAGCCCGCGGCGGCATCGGCAAGCCCGGCCGATCAAGCGCCGAGTAT
GTCACCTCCAACGATTGTCCAATCGTCGTCCAAAGATGTCACGAGGCCTT
CGCATCTTCGGCATGTTTCTAGTGCATCGTCATCGTTCTCCTCGCTGGTC
GAATCGATGTCGGAAGATCATGCGGGCTCCGCGGAGGGAGCAGGCTCCTT
TGCAGAGCCCCTTTACAATTTCCGCAGTCTGGCAGCCGTGATTGGAGATG
AAGAGAAGGGCGACGAGGCACCCGAGCATGTTGAAGAGACCTCGTCCAAG
CCGAATGTGGAGGGGTCAGCCTCGCAGTCCGTTCAGCCGGTGGCAGAGGC
ATCGGTTGCTGAACCCGCGACTACCACTGAGGCCAAGGTACCGATGGAGG
AGCAGCGCGACAATTTGATACCGAAAGAGCTGGAGACCCAATCCGTCGAA
ATTACAGGTACCACACATGATACGGAAGCGACGTCCTGA back to topCoding sequence (CDS) from alignment at ch5:1200472..1202960+ >KJC3_007008-T1 ID=KJC3_007008-T1|Name=KJC3_007008-T1|organism=Aspergillus niger KJC3|type=CDS|length=4842bp|location=Sequence derived from alignment at ch5:1200472..1202960+ (Aspergillus niger KJC3)
ATGGGCAATTCTCAGGCGAAAGAGAGCCGGCCGCTTGCTTCATCCAGTCG
CCGCAGCCATCACCATGGCCCATACGGTGACCGCCACCATGGTGATGGTT
CTAGGTCGAACCGGGGTAGCCGGCCCGACCTGTCCCTGCTCGGAATAGGC
GGAAGTTCAGAGCGAGATCTGGCGTCGCTCGAACATCGACGAGAAACAAG
ACAGGAACGAGAGGCTCGCCGGCTAGAGAAAGAGCGGGTAGCTCGGCTCA
AGGAGCGGGAGCGTAGTATGAAGGAAGAACATGTGGATGGTGGTTATCTG
GTGACCCAAGGTGTCTATACAGGTCCAGAGGACTTCAACAAGGCTGTGGT
CCGGCAGCTAATGATCGAACGACGACTTGCGCCGTTTTGGAGAGGACTGA
ATGACTTTTCGGACTCGTGGACAGAGCACCAGCTTATGGCTGCGGCGCGT
GGCCTTCCCATTCCCCCTCCCGACGAGATTCCCCCTGAACTGGAGTATAA
GAACCCTCCCAAGGCCGCGGAAGACGCAAAGGAGGTTTCGGATTCAGCCG
CAGTGCAATATTTGATGGTCCCCATTACGTCAAGATCACAATCATACGGC
TCCGACGCTTCCCAGTCATCCACGCCCGCACATTCCCTCCCCTCCCCAAC
ATCTCCTATCGCGTCCGGCACATCGAGCTCACCACTGTTCAGAGCGCGAG
CCAAGACACTTGCGTCGCTAACCACGCCGAAGCATGGAGTTCAGTCTGAT
GCGGCTTCACGTGAAATGCAGTTACCCCGTGACCCGTTTGTGAACGGACA
ACCCATTGAAGCTTACCTATATAAAGACGCGGCGGAATGTCCCATTTGTT
TTCTGTACTATCCTCCGTATCTCAATCGGACGAGGTGTTGCGACCAGCCT
ATATGCTCCGAATGTTTCGTTCAGATCAAACGCCCCGACCCTCATCCGCC
GGAGCATGGAGACGCTAACCCAGATTCTGCTCCAGCTGAGGGTGGTGAAC
AAGCCGAAAGCCAAGACTGCCAGCTAGTGTCAGAACCCTCGGCATGTCCA
TTTTGTGTCCAGCCGGAGTTTGGGGTGACATATGCGCCCCCGCCGTTCCG
GAGAGGGCTAGCGTACGCTTCTGATCCGAGCTCACGCCCCAATATGGCCT
CTCCACTGTCTTCCACATCCTCTCTATCCTCTGGGAACACCCCCACCACC
GGCCGTCGACGCGCGACCTCGTTATCGGCAAACGATCCAACCGTGATTAC
TACCGATAGGATTCGTCCCGACTGGGCTCAAAAGCTTGCAAATGCCCGAG
CTCATGCTGCGCGGCGGTCGGCAGCAGCGACTGCCCTTCATACTGCGGCT
TACTTGATGCACTCTAACGGCGCTGGAAATGATTCCCGGATTGGTCTGGG
AAGAAGAAGCGTCATGCGGAGAAACGGCGCGCCAGAAGCTCAGAACTCTA
GCGCGCGCACCGGATCCCCGGCGCTGCAGGCGCTGGCATTCCTCACGGAT
AGGCGCGCAGCTGGCCACGAAGCCGACTCGGCGGAAGAAGGGTCCGGTAA
CATTGCCCCACCTCGTCAGAGCTCGAGGCGGAATCGCATAGATGATCTGG
AAGAAATGATGATGATGGAGGCGATCCGACTCAGTCTAGCGAGCGAGGAA
GAGCGGCGCAAGAGAGAGGAGAAAGAGGCCAAGAAAGAGGCAAAGAAAAA
GGAGAAGGAAGCCAAGAAGGCAGAAAAGGTTGCGCGCAAAACCGGGCTCA
CCAGTAACAATGCGAGCAGCTCCGCCTTGGATGTGCTTCCGGATGCGCGG
CTAGGTAGGGTCACGAGCAGTTCCTCTTCCATTGCGGCTGAGGAGGTTGT
ATCGGCCGGCAAGGGTAAGGAGGTAGACCGTTCTGTACCAGCTGGTGGCT
CTGCTGCTGAACCCAGTACTGCGGCCGAGGAAGTGCAGCCCGCGGCGGCA
TCGGCAAGCCCGGCCGATCAAGCGCCGAGTATGTCACCTCCAACGATTGT
CCAATCGTCGTCCAAAGATGTCACGAGGCCTTCGCATCTTCGGCATGTTT
CTAGTGCATCGTCATCGTTCTCCTCGCTGGTCGAATCGATGTCGGAAGAT
CATGCGGGCTCCGCGGAGGGAGCAGGCTCCTTTGCAGAGCCCCTTTACAA
TTTCCGCAGTCTGGCAGCCGTGATTGGAGATGAAGAGAAGGGCGACGAGG
CACCCGAGCATGTTGAAGAGACCTCGTCCAAGCCGAATGTGGAGGGGTCA
GCCTCGCAGTCCGTTCAGCCGGTGGCAGAGGCATCGGTTGCTGAACCCGC
GACTACCACTGAGGCCAAGGTACCGATGGAGGAGCAGCGCGACAATTTGA
TACCGAAAGAGCTGGAGACCCAATCCGTCGAAATTACAGGTACCACACAT
GATACGGAAGCGACGTCCTGAATGGGCAATTCTCAGGCGAAAGAGAGCCG
GCCGCTTGCTTCATCCAGTCGCCGCAGCCATCACCATGGCCCATACGGTG
ACCGCCACCATGGTGATGGTTCTAGGTCGAACCGGGGTAGCCGGCCCGAC
CTGTCCCTGCTCGGAATAGGCGGAAGTTCAGAGCGAGATCTGGCGTCGCT
CGAACATCGACGAGAAACAAGACAGGAACGAGAGGCTCGCCGGCTAGAGA
AAGAGCGGGTAGCTCGGCTCAAGGAGCGGGAGCGTAGTATGAAGGAAGAA
CATGTGGATGGTGGTTATCTGGTGACCCAAGGTGTCTATACAGGTCCAGA
GGACTTCAACAAGGCTGTGGTCCGGCAGCTAATGATCGAACGACGACTTG
CGCCGTTTTGGAGAGGACTGAATGACTTTTCGGACTCGTGGACAGAGCAC
CAGCTTATGGCTGCGGCGCGTGGCCTTCCCATTCCCCCTCCCGACGAGAT
TCCCCCTGAACTGGAGTATAAGAACCCTCCCAAGGCCGCGGAAGACGCAA
AGGAGGTTTCGGATTCAGCCGCAGTGCAATATTTGATGGTCCCCATTACG
TCAAGATCACAATCATACGGCTCCGACGCTTCCCAGTCATCCACGCCCGC
ACATTCCCTCCCCTCCCCAACATCTCCTATCGCGTCCGGCACATCGAGCT
CACCACTGTTCAGAGCGCGAGCCAAGACACTTGCGTCGCTAACCACGCCG
AAGCATGGAGTTCAGTCTGATGCGGCTTCACGTGAAATGCAGTTACCCCG
TGACCCGTTTGTGAACGGACAACCCATTGAAGCTTACCTATATAAAGACG
CGGCGGAATGTCCCATTTGTTTTCTGTACTATCCTCCGTATCTCAATCGG
ACGAGGTGTTGCGACCAGCCTATATGCTCCGAATGTTTCGTTCAGATCAA
ACGCCCCGACCCTCATCCGCCGGAGCATGGAGACGCTAACCCAGATTCTG
CTCCAGCTGAGGGTGGTGAACAAGCCGAAAGCCAAGACTGCCAGCTAGTG
TCAGAACCCTCGGCATGTCCATTTTGTGTCCAGCCGGAGTTTGGGGTGAC
ATATGCGCCCCCGCCGTTCCGGAGAGGGCTAGCGTACGCTTCTGATCCGA
GCTCACGCCCCAATATGGCCTCTCCACTGTCTTCCACATCCTCTCTATCC
TCTGGGAACACCCCCACCACCGGCCGTCGACGCGCGACCTCGTTATCGGC
AAACGATCCAACCGTGATTACTACCGATAGGATTCGTCCCGACTGGGCTC
AAAAGCTTGCAAATGCCCGAGCTCATGCTGCGCGGCGGTCGGCAGCAGCG
ACTGCCCTTCATACTGCGGCTTACTTGATGCACTCTAACGGCGCTGGAAA
TGATTCCCGGATTGGTCTGGGAAGAAGAAGCGTCATGCGGAGAAACGGCG
CGCCAGAAGCTCAGAACTCTAGCGCGCGCACCGGATCCCCGGCGCTGCAG
GCGCTGGCATTCCTCACGGATAGGCGCGCAGCTGGCCACGAAGCCGACTC
GGCGGAAGAAGGGTCCGGTAACATTGCCCCACCTCGTCAGAGCTCGAGGC
GGAATCGCATAGATGATCTGGAAGAAATGATGATGATGGAGGCGATCCGA
CTCAGTCTAGCGAGCGAGGAAGAGCGGCGCAAGAGAGAGGAGAAAGAGGC
CAAGAAAGAGGCAAAGAAAAAGGAGAAGGAAGCCAAGAAGGCAGAAAAGG
TTGCGCGCAAAACCGGGCTCACCAGTAACAATGCGAGCAGCTCCGCCTTG
GATGTGCTTCCGGATGCGCGGCTAGGTAGGGTCACGAGCAGTTCCTCTTC
CATTGCGGCTGAGGAGGTTGTATCGGCCGGCAAGGGTAAGGAGGTAGACC
GTTCTGTACCAGCTGGTGGCTCTGCTGCTGAACCCAGTACTGCGGCCGAG
GAAGTGCAGCCCGCGGCGGCATCGGCAAGCCCGGCCGATCAAGCGCCGAG
TATGTCACCTCCAACGATTGTCCAATCGTCGTCCAAAGATGTCACGAGGC
CTTCGCATCTTCGGCATGTTTCTAGTGCATCGTCATCGTTCTCCTCGCTG
GTCGAATCGATGTCGGAAGATCATGCGGGCTCCGCGGAGGGAGCAGGCTC
CTTTGCAGAGCCCCTTTACAATTTCCGCAGTCTGGCAGCCGTGATTGGAG
ATGAAGAGAAGGGCGACGAGGCACCCGAGCATGTTGAAGAGACCTCGTCC
AAGCCGAATGTGGAGGGGTCAGCCTCGCAGTCCGTTCAGCCGGTGGCAGA
GGCATCGGTTGCTGAACCCGCGACTACCACTGAGGCCAAGGTACCGATGG
AGGAGCAGCGCGACAATTTGATACCGAAAGAGCTGGAGACCCAATCCGTC
GAAATTACAGGTACCACACATGATACGGAAGCGACGTCCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263RF8 |
| Product | SNF1-interacting protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1200472..1202960 + |
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