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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1217400..1220288+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007016-T1 ID=KJC3_007016-T1|Name=KJC3_007016-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2889bp|location=Sequence derived from alignment at ch5:1217400..1220288+ (Aspergillus niger KJC3)
TGCAATCCTCGCTCTTGTGCTCTTTTCCAGCTGTCGGTCGGTGTTATTTT
GCATCTATATACACCCTTGTTCCATGATTTAAATCGCTCATACTTGATGC
TCCGCCAGGCTGTCCGAGGAGCTCGTTGGTATCAGCATGTGGCCCGCGGA
AGCCCGTTCTTCCCGCGAGCATTCGCCGCTGTAGCGCCACGCTCCATACA
CTATGGCGGTCCCAAAGACAAGATCAACTTCTACGAGCAGGATACTCGTA
AGAGCAAGATAAGGCGGAAGGTCGACCCAGAAGCAGAGGGGCGCGCCGAG
CAGGAAGACGCCGAGAAGGAACTCGCCCGCCTGACCCAAGAGCTAGAAGA
GCTGAAGGAAGGCCCGTTCGGCCCCAACAGCCAGTTCATTCGAGAACTAC
CCGAGGAGGACAGGGCTATTGCACTCGAAGCACTCCGGAAATATGAGGAG
GACGAGGCGGCCGGGACGGTCGATGTCAGCCTTAAGGATCTCTACGAGAA
GGAGCTCGACGGTCTCTTGAAGAACGAATTTGAAAGCCTGGTCAAGGAAG
AGGAGAACTGGCAGTCTGACGAGGAGGACGATTCACGTACACTGGTTGTG
CGCCGCCCTTACGAAGTGGAATTGGAGGACTCAGACCTGCAGCCATATGC
CGACAAGTTGAACAAATGCCTTCGACGGATCGCGAGTGGCGACTCTAGCC
TGCGCTGGGAACAGGAATTGTGGAGGTGGTATCGGCGATGCAAACAGGTC
GTCCCGGGATTCGTGGAGTCCTTGTCGGAGGAGACGCTGACTCTCCTATG
GAATACTCTGGCCTCGAAGAAGTCCGCCAAACCCCAGGAAACCGCACGGG
TACGCACCCTGGCTGAAGACTCGCTATCAGCTGGCCTCACCCTTTCCACG
CCTCGTATTCTTTCGTACATTGAAACACTTCATGAATGCGGGGATACTCA
AGTGGCATTGGAGAAATGGGAAGCATACCAGGCCGAGCTCAGCCAAAGGA
AAGAGGACCTGGAAGCATACTGGAAATTAGGCGTCCGGCTGTTCGCAGCT
GAAGACGACCCTCAGCGAGCACAAGATATTGCGCTGGCCTTCTTAGCCAA
CGATAAGTCACGGCAACCACGCATTCTGATCCCTGTCATCACGGCCTGGG
GCAAACGGTCCGGGAAGGAAGCAGAAGTCAAGGCGTGGGCGATGTATCTG
CAGCTCAAGGCATTCCTGGACCGGAAGATGACGATGGACGACTACGATCA
AGTCAGCATTGGCTTGCTCAAAGCCGGCCGACCGAGCCTTGCCATAGCCG
TTTTCAAAGATATGATGGTCACCAACAGCGATCCCCGACACGACTCGACT
TCTCTCTACAAAGCCGCCGTCGGCTTAGCAGGCAACCTGCAAGCGTCCAG
TATTTCCGAACAAGACGTGAACAAGGTCTCGCTCTCTACCCTGACTGTCC
TTCCGCGGAAGTTCCAGAATCGCTTCTTCTATGCCAGCTGGATGAAGAAA
CTAATCGGCATGGGCGAGGTCGACTCCGCCGCCATGGTTATCGAGCTGAT
GTACGAACGTGGCGTCAAGCCAGATGCAAAGCACCTCAACGGAGTCATTG
CCGCCTGGCTGCGCGACGGCAGCAGCACCTCGCGAGAGAAAGCCGAACGC
CTCGGATGGGCCATGGTCCAGCAGCGTATTGACCAAGTCTGGGCGCGCAC
CACCACCGAGAAGGCTCCCCAACTCGACGTGAACCAGGAGAGCACAGAGG
GCGTCCGACTGCCCGAATTCATGAAACGGCCCATGCCAGCCGCCACCATC
GAGACCTTCTCCATCCTCCTCCTCCACTACACGCGGCGCAGCGACGACGA
CATGATCAAATACCTCGTCAAATGCCTCGGCGACGGCCGCATCCACCCGA
ACTCCTACTTCATGAACCACCTGCTCTACGCCGAGCTTCGCAAACAAGAC
ATCGGCTCCCTCTGGACCAAATACCAATCCCTGTCCGCCATCACCCAACC
CGACCTCGAAACGTACGCCTGCCTCTGGGACTGCGGCAAGCTACAATACG
ACCGCGGCCGAACCGCCTACGTAACCGACTTCCCATCCGCGCGCCACCTC
TTCTCCGACATGATCCGCTGGTTCACCAAGCTATCCGCGCGCGCACAAAC
CGCCACCCGGGGCGAATTCTCCAAGGAACTCTATGACCAAATCATCCGCT
GCTTCTGTCTCTCTAAAGACCTCCCCGGCACTCTCGTCGCCCTGTGCACC
ATGCGCGCGTACTTTGGCTTCTTCCCCGACGACACCACAGCCCGTCTGAT
CGTGCTACAAGTCGCCCGGTTGGCAGGTGTGCCGGCCGAGACGCCCAAGC
GCCGACTCCGTCGGCTGTCCAGCACACCAAAGAGCAAGGAGAATATCAGC
CATGTTAACCGGCTCGTGGAGATCCTCAGTGATCGGAAGCTCGGGGCACT
CGCGGCCCGCGGTCTGGAATTGAGTGATCTCGAGCAGCAGGAGCGCGAGC
AGTATCAGTTGGAGGTTATGACGGAGCTGTTGCGCGTGGTGATGGGCCGG
CGGGCGGCTGGAGGGGAGGGTCACGGTGCGGTGGAGGAGGAGATTGCTAA
GGTGGCGGAGGAGATGGGGGTGACGGGGGTGGATTTGGGGGTGTCGTTGG
GGGATGATTTGTTGTTATAGGTGGGGGTCTATGAGCATGGTTGGCGTTTG
GTTGTATCTTTCTACTTCTTGTCCGTTGGTGTGGGTGTATATAAAAAGTG
GTGATTCTGGGGGTATACATGTAATATATTATATCATGATGATAGAATTG
GATGTCCTCTCTTCAACTAGTAGCTCGTTATTTTCACTTGTCGGTAATAC
CAGTAGGATTTACCAACCGTCGTATTATTCTTAACCATG back to topCoding sequence (CDS) from alignment at ch5:1217400..1220288+ >KJC3_007016-T1 ID=KJC3_007016-T1|Name=KJC3_007016-T1|organism=Aspergillus niger KJC3|type=CDS|length=2574bp|location=Sequence derived from alignment at ch5:1217400..1220288+ (Aspergillus niger KJC3)
ATGCTCCGCCAGGCTGTCCGAGGAGCTCGTTGGTATCAGCATGTGGCCCG
CGGAAGCCCGTTCTTCCCGCGAGCATTCGCCGCTGTAGCGCCACGCTCCA
TACACTATGGCGGTCCCAAAGACAAGATCAACTTCTACGAGCAGGATACT
CGTAAGAGCAAGATAAGGCGGAAGGTCGACCCAGAAGCAGAGGGGCGCGC
CGAGCAGGAAGACGCCGAGAAGGAACTCGCCCGCCTGACCCAAGAGCTAG
AAGAGCTGAAGGAAGGCCCGTTCGGCCCCAACAGCCAGTTCATTCGAGAA
CTACCCGAGGAGGACAGGGCTATTGCACTCGAAGCACTCCGGAAATATGA
GGAGGACGAGGCGGCCGGGACGGTCGATGTCAGCCTTAAGGATCTCTACG
AGAAGGAGCTCGACGGTCTCTTGAAGAACGAATTTGAAAGCCTGGTCAAG
GAAGAGGAGAACTGGCAGTCTGACGAGGAGGACGATTCACGTACACTGGT
TGTGCGCCGCCCTTACGAAGTGGAATTGGAGGACTCAGACCTGCAGCCAT
ATGCCGACAAGTTGAACAAATGCCTTCGACGGATCGCGAGTGGCGACTCT
AGCCTGCGCTGGGAACAGGAATTGTGGAGGTGGTATCGGCGATGCAAACA
GGTCGTCCCGGGATTCGTGGAGTCCTTGTCGGAGGAGACGCTGACTCTCC
TATGGAATACTCTGGCCTCGAAGAAGTCCGCCAAACCCCAGGAAACCGCA
CGGGTACGCACCCTGGCTGAAGACTCGCTATCAGCTGGCCTCACCCTTTC
CACGCCTCGTATTCTTTCGTACATTGAAACACTTCATGAATGCGGGGATA
CTCAAGTGGCATTGGAGAAATGGGAAGCATACCAGGCCGAGCTCAGCCAA
AGGAAAGAGGACCTGGAAGCATACTGGAAATTAGGCGTCCGGCTGTTCGC
AGCTGAAGACGACCCTCAGCGAGCACAAGATATTGCGCTGGCCTTCTTAG
CCAACGATAAGTCACGGCAACCACGCATTCTGATCCCTGTCATCACGGCC
TGGGGCAAACGGTCCGGGAAGGAAGCAGAAGTCAAGGCGTGGGCGATGTA
TCTGCAGCTCAAGGCATTCCTGGACCGGAAGATGACGATGGACGACTACG
ATCAAGTCAGCATTGGCTTGCTCAAAGCCGGCCGACCGAGCCTTGCCATA
GCCGTTTTCAAAGATATGATGGTCACCAACAGCGATCCCCGACACGACTC
GACTTCTCTCTACAAAGCCGCCGTCGGCTTAGCAGGCAACCTGCAAGCGT
CCAGTATTTCCGAACAAGACGTGAACAAGGTCTCGCTCTCTACCCTGACT
GTCCTTCCGCGGAAGTTCCAGAATCGCTTCTTCTATGCCAGCTGGATGAA
GAAACTAATCGGCATGGGCGAGGTCGACTCCGCCGCCATGGTTATCGAGC
TGATGTACGAACGTGGCGTCAAGCCAGATGCAAAGCACCTCAACGGAGTC
ATTGCCGCCTGGCTGCGCGACGGCAGCAGCACCTCGCGAGAGAAAGCCGA
ACGCCTCGGATGGGCCATGGTCCAGCAGCGTATTGACCAAGTCTGGGCGC
GCACCACCACCGAGAAGGCTCCCCAACTCGACGTGAACCAGGAGAGCACA
GAGGGCGTCCGACTGCCCGAATTCATGAAACGGCCCATGCCAGCCGCCAC
CATCGAGACCTTCTCCATCCTCCTCCTCCACTACACGCGGCGCAGCGACG
ACGACATGATCAAATACCTCGTCAAATGCCTCGGCGACGGCCGCATCCAC
CCGAACTCCTACTTCATGAACCACCTGCTCTACGCCGAGCTTCGCAAACA
AGACATCGGCTCCCTCTGGACCAAATACCAATCCCTGTCCGCCATCACCC
AACCCGACCTCGAAACGTACGCCTGCCTCTGGGACTGCGGCAAGCTACAA
TACGACCGCGGCCGAACCGCCTACGTAACCGACTTCCCATCCGCGCGCCA
CCTCTTCTCCGACATGATCCGCTGGTTCACCAAGCTATCCGCGCGCGCAC
AAACCGCCACCCGGGGCGAATTCTCCAAGGAACTCTATGACCAAATCATC
CGCTGCTTCTGTCTCTCTAAAGACCTCCCCGGCACTCTCGTCGCCCTGTG
CACCATGCGCGCGTACTTTGGCTTCTTCCCCGACGACACCACAGCCCGTC
TGATCGTGCTACAAGTCGCCCGGTTGGCAGGTGTGCCGGCCGAGACGCCC
AAGCGCCGACTCCGTCGGCTGTCCAGCACACCAAAGAGCAAGGAGAATAT
CAGCCATGTTAACCGGCTCGTGGAGATCCTCAGTGATCGGAAGCTCGGGG
CACTCGCGGCCCGCGGTCTGGAATTGAGTGATCTCGAGCAGCAGGAGCGC
GAGCAGTATCAGTTGGAGGTTATGACGGAGCTGTTGCGCGTGGTGATGGG
CCGGCGGGCGGCTGGAGGGGAGGGTCACGGTGCGGTGGAGGAGGAGATTG
CTAAGGTGGCGGAGGAGATGGGGGTGACGGGGGTGGATTTGGGGGTGTCG
TTGGGGGATGATTTGTTGTTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007016-T1.utr5p1 | KJC3_007016-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007016-T1.utr3p1 | KJC3_007016-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002885 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1217400..1220288 + |
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