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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1256601..1260543+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007028-T1 ID=KJC3_007028-T1|Name=KJC3_007028-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3943bp|location=Sequence derived from alignment at ch5:1256601..1260543+ (Aspergillus niger KJC3)
CTGGAGAGTGAGGTTGGCCCCACGTGAGCGGCACGCGATTCCTGATTCTG
CTCGGAACGGAACAACCAAAGAGGCTCTGTCACTGAATCTCCGGCCGCCA
TTTATTGAGTTGCGCCCTCGTCAAGCCTTCGCGATGTCGGGAGGATGGCG
TGCATGCTGTCTCTCTTTGAAGGTCGTCTGAGATCTTCTCGCCATGAACT
CCCAGGGGTTCTCTTTTCCTCCTCCCCCTCCTCCTCCTCCCTCCCAGCAA
CAACAACCGCAACAACCGCAGCCGCAGCAGCAACAATACCGTCACCATAA
TGCCAACTACCCTCCTCAATATGGCGGTCAGGGCTACTACGGCCAACGAG
GTGGTCATGCTCAGGGTGGCCATTTCAGAGGACGTGGGAGGGGCTATGGA
AACCGGGGAGGCGCCCGTGGAGGTCACTTCATGACACCAGATAACCGCGC
GTACCCTACCGCTACACCGTCGACTGGCTACGCTCAGATGAACTACTCTG
GGTATGCCTCGCACCCAAACCCAGCAACCCAAGCTACTCCTTCGCCATCG
CAAAACTTTCAACGGGCCCCGAATGCCTCCTCTTTCCCTCCTTCGCAGCC
TTTTACGCAAACCGCAGCCCGGGTGCCGCCTTACCAAGGCCAGCCTAACT
ATGGGGGAACTTATACTCCGCCTACCGCTCAACCTGGGTCTATGTATCCT
TCGGCCATGCCTACCCAGCAGCCGGTCAACCAGCCAGTTCAGACGCCCAT
GGTTGCCCCACCTATGCGCTGGGGGTTTGAGCATACGGGACCGACAGGCT
CTTTCGCCGGAACTCAGCGCGGCGGACGCTTCAATGGTCATAACGCTCAG
TCACACAACGGGGATAGAACAACGCACTATGCCAACAAACGCGATCATAA
TGCAGCCTTTGGAAAACCCCAGTCTGTCGCACCGCGAGTTCCCGCACCGC
CTCCGGTTCCAAGCTTTGGAAACCCACTCCCTGTCAAACCCCCGCCACCC
GCTGATGCCACAAGGAAGCCAAAGAAGAAGAAGAGAAAGCACAATCAGCT
TGGACTGACCCCGAGAACCGAAGAGCATGAGTCGAGCGAGGAGGAAGACG
ATGTCGATGAAGAAGCGAGGTTAGCCGGAGCAGCTGCCAACACCACAGCT
CTCAAGGTCACATATCGCGGGAAGACTTCCACACTGCAGTCGCCAGAGGA
AATTGCTGCCTGGATCGAGGAACGGCGAAAGCGGTATCCGACGCAGGCGA
AAGTGGAAGAGAAGAAAAAGGCCATGGAAGAGGCGAAGAAAGCACGCCAG
GAAGTACAGCGGCAGAAGGATCAGCGAAAGCAAGAGTCCAAACGAGCGCA
GAAGGACGGTCGAAATAAGAAAGCAAACGACAAGCAGCCTAATGACCAAC
CGGTCGACCCCATGGATGCTGCGGCAAAGGCCAAGGAGAAGGCGGACAGA
CTACGGCGGAAGCTCATGAAAGAAGAGAAGCGAGTGGCCAAAGCCGAGGC
TGATGCTGAAAGGGCTCTAATGAGGGCTGAGGCATTGCAAAAAGGTTCGG
CCGATGCCAACATAGACGAAACTTTGGCCACTGGACAAACCCAACCGGCT
TCTGCAACCGGGACCAAGGCAGATGCAGGTTCGGAAGACAAATCTGTCAA
ACCCGGGCCTGCTGCGGCCGAGGAATCAGGAGTCGCCAACGGCCATACGA
CGTCTGCAACAGATGTCAATATAGACGCCGGGAAGCCCGAAGAGGCTGGG
GACGAGGTCAACATCTCGTCTCAAGATGACTCCGATAGCAGCGATTGGAC
GTCGTCGAGTGGGTCAGATTCCTCCTCGGATGAATCCGACAGTGACTCGG
ACTCTGCGCCGGAGGAGGCGACCTCTCGACGAGAAGGACCCGAGCGGGTA
CCGCCACCCCCTCGCGAGAACAAGAAAAAACCATGCCATCACTTTGCTCG
AACCGGTCGCTGCAGGAACGGAGATAAATGCCGATTTTCGCACGAGACAC
CTGAGCGAGGGAAGAAAGCGAAGCCAACGGAGTCTAAGGGGCGAAAGGGG
CTTCTACAAGCGGTGAGTCCAGCACTCCCCAAACGCATGCTGCTGAGAAC
GTGACTAACATGTGCAACCGCCAGCTTCTGGACCGCCAAAAGGGAGAAGA
AGACCGAAAAGTCATGGAAGCAATTGCATGGCTCGGAGAAAACGGATTCC
TAGATGCGCCAAAGGACCAAGAGGAAGCTAACAGGTCGATATCGGTGACC
GACGGCGCGGAGGCTCCGCAGCAGGCAGCCCCCAAGGATACAATCTCGGG
GCAAGAAACCGATGCTGCCCCAGTGACTGCCTAGTATATAGTGTGGCACC
ATCTTGAAGGCCGTATCGTAGTGTGCTGTATATACATAGCTAGACTAACG
CATTATAGTACGTCTCGTGCCAGGCTCCATCGTGCTCGAGCACGGCAGAC
AGTTCAGATTTTCATTAGTGACTCGTGCCCGTAGGCTGTATAGTGGGGAG
TGAGTTCGGTGTTCTTTCGTTGGTCCAAGAACCGAATCTAGACGAATCAG
AGTTCGGCCATTAAGTGTAGCAGCACTTCGGACGAGAGCGTAAAATTGCC
ATCGCACCATAGTGGCCACCGGAGCTCACTAACAAAGCGATGCGGCTGCA
ACCTCAGTTTAAGCCGACTATAGATAGTAGGTACTTTAGGAAAATGGATG
AATGAATGGATGGGTGGGATAGGTGGCGCCTCCCCGCTTCGCGCTGCGCT
TGTGAGTTAGCTCAAATTGTTAGTGCTCTGGTAGATAATTCTTAGCTCCT
GGCTATAGACTAAGTGAGGACTTCGAATGATGGCATAACGCTCGGACGGA
GTTCATTTCCCATGATAGTCTAGATATGATGGATGCCTAGCGAGGGCGTG
GGTCTTGTATTTCCATCCAGGATTAGAAAGTCTGTCTGCCTGCCTGCCTG
CCTGTCACCGAAGGAGAGAACGAAAGGAGGAAGGGGAGGAAAGTCTAGCC
CATTGTGAGTGTAATGTAGGTAGTCCAGGGGGAAGAACGATGTCGGCGTT
AAGTAGGTAAATAGACTAAGTAGATGGAGGGGAGAGAGGTTCGTAGGGTG
GGGGGGGGGAGATAATCCTTAACGGATTGGGAGGCGAAGTGGATGTGAAG
CTTTGTGTCTAAATTACTGGATAAGGAAAGAGTGCAGTTTGGGTCACTGG
TTGAGGAGCCGAGAGAACTGGACCTATACTCCCAAAGGAGCACTCTCCGA
GGAAGAGAAAGACAGTATACTCCGTAGTCGATAAGGGCGGATAAAGAGGT
TCGTATGGACCCCTGCCTGTGGACAGGGATCTCGATAGTGTGGTGGGTGG
CTTAGATCCTGGAGATGTGATGTCTCACTCAGTTCATTAAATCGCTTCTA
AGCTTTGTATTGAACAGTATTTTAATTCACGATGGAAGGTAGTCGGGTAG
TTGCTGGTTAGTTAACTAGTTGGATACCGCAGGCAAAATTAATAATCGTG
ATCGGCCGCATCCACATGTCAGTTCCGCACATCCTGATAAGATAGACTGT
TGGACACTAACAGCCGACCAGTCGGATAGCCAATGTTTTTCTCATGATAC
TTGCATCAATTCTAATCAGAAAAGAGCAAAGTATGGAACAATGTGTGTGA
CTGCAAGTCAGTAATTACATACCCATCATACCAACAACAAGACAGAAGGT
TCCAGACAGACAGACAGCCAGACAGACAGGACTAATAATACGGTACCCTC
GAGCTAGTCCCGAACGAGGACATCAGCAGCTTCCACAAACTTTGGAGCGG
AGTGGAACATGTCGGCGAGGGTTAATTTCATTTTTGCCCAATGATCGTCC
GCGTGCCCTGAGTTGTTGCTGCAGGAATTGGGAAAACGCCCCTGAGCAGA
TACCACCTTTCCTGCCAATAATGCCTCTCTCAATCGTATCGAG back to topCoding sequence (CDS) from alignment at ch5:1256601..1260543+ >KJC3_007028-T1 ID=KJC3_007028-T1|Name=KJC3_007028-T1|organism=Aspergillus niger KJC3|type=CDS|length=4158bp|location=Sequence derived from alignment at ch5:1256601..1260543+ (Aspergillus niger KJC3)
ATGAACTCCCAGGGGTTCTCTTTTCCTCCTCCCCCTCCTCCTCCTCCCTC
CCAGCAACAACAACCGCAACAACCGCAGCCGCAGCAGCAACAATACCGTC
ACCATAATGCCAACTACCCTCCTCAATATGGCGGTCAGGGCTACTACGGC
CAACGAGGTGGTCATGCTCAGGGTGGCCATTTCAGAGGACGTGGGAGGGG
CTATGGAAACCGGGGAGGCGCCCGTGGAGGTCACTTCATGACACCAGATA
ACCGCGCGTACCCTACCGCTACACCGTCGACTGGCTACGCTCAGATGAAC
TACTCTGGGTATGCCTCGCACCCAAACCCAGCAACCCAAGCTACTCCTTC
GCCATCGCAAAACTTTCAACGGGCCCCGAATGCCTCCTCTTTCCCTCCTT
CGCAGCCTTTTACGCAAACCGCAGCCCGGGTGCCGCCTTACCAAGGCCAG
CCTAACTATGGGGGAACTTATACTCCGCCTACCGCTCAACCTGGGTCTAT
GTATCCTTCGGCCATGCCTACCCAGCAGCCGGTCAACCAGCCAGTTCAGA
CGCCCATGGTTGCCCCACCTATGCGCTGGGGGTTTGAGCATACGGGACCG
ACAGGCTCTTTCGCCGGAACTCAGCGCGGCGGACGCTTCAATGGTCATAA
CGCTCAGTCACACAACGGGGATAGAACAACGCACTATGCCAACAAACGCG
ATCATAATGCAGCCTTTGGAAAACCCCAGTCTGTCGCACCGCGAGTTCCC
GCACCGCCTCCGGTTCCAAGCTTTGGAAACCCACTCCCTGTCAAACCCCC
GCCACCCGCTGATGCCACAAGGAAGCCAAAGAAGAAGAAGAGAAAGCACA
ATCAGCTTGGACTGACCCCGAGAACCGAAGAGCATGAGTCGAGCGAGGAG
GAAGACGATGTCGATGAAGAAGCGAGGTTAGCCGGAGCAGCTGCCAACAC
CACAGCTCTCAAGGTCACATATCGCGGGAAGACTTCCACACTGCAGTCGC
CAGAGGAAATTGCTGCCTGGATCGAGGAACGGCGAAAGCGGTATCCGACG
CAGGCGAAAGTGGAAGAGAAGAAAAAGGCCATGGAAGAGGCGAAGAAAGC
ACGCCAGGAAGTACAGCGGCAGAAGGATCAGCGAAAGCAAGAGTCCAAAC
GAGCGCAGAAGGACGGTCGAAATAAGAAAGCAAACGACAAGCAGCCTAAT
GACCAACCGGTCGACCCCATGGATGCTGCGGCAAAGGCCAAGGAGAAGGC
GGACAGACTACGGCGGAAGCTCATGAAAGAAGAGAAGCGAGTGGCCAAAG
CCGAGGCTGATGCTGAAAGGGCTCTAATGAGGGCTGAGGCATTGCAAAAA
GGTTCGGCCGATGCCAACATAGACGAAACTTTGGCCACTGGACAAACCCA
ACCGGCTTCTGCAACCGGGACCAAGGCAGATGCAGGTTCGGAAGACAAAT
CTGTCAAACCCGGGCCTGCTGCGGCCGAGGAATCAGGAGTCGCCAACGGC
CATACGACGTCTGCAACAGATGTCAATATAGACGCCGGGAAGCCCGAAGA
GGCTGGGGACGAGGTCAACATCTCGTCTCAAGATGACTCCGATAGCAGCG
ATTGGACGTCGTCGAGTGGGTCAGATTCCTCCTCGGATGAATCCGACAGT
GACTCGGACTCTGCGCCGGAGGAGGCGACCTCTCGACGAGAAGGACCCGA
GCGGGTACCGCCACCCCCTCGCGAGAACAAGAAAAAACCATGCCATCACT
TTGCTCGAACCGGTCGCTGCAGGAACGGAGATAAATGCCGATTTTCGCAC
GAGACACCTGAGCGAGGGAAGAAAGCGAAGCCAACGGAGTCTAAGGGGCG
AAAGGGGCTTCTACAAGCGCTTCTGGACCGCCAAAAGGGAGAAGAAGACC
GAAAAGTCATGGAAGCAATTGCATGGCTCGGAGAAAACGGATTCCTAGAT
GCGCCAAAGGACCAAGAGGAAGCTAACAGGTCGATATCGGTGACCGACGG
CGCGGAGGCTCCGCAGCAGGCAGCCCCCAAGGATACAATCTCGGGGCAAG
AAACCGATGCTGCCCCAGTGACTGCCTAGATGAACTCCCAGGGGTTCTCT
TTTCCTCCTCCCCCTCCTCCTCCTCCCTCCCAGCAACAACAACCGCAACA
ACCGCAGCCGCAGCAGCAACAATACCGTCACCATAATGCCAACTACCCTC
CTCAATATGGCGGTCAGGGCTACTACGGCCAACGAGGTGGTCATGCTCAG
GGTGGCCATTTCAGAGGACGTGGGAGGGGCTATGGAAACCGGGGAGGCGC
CCGTGGAGGTCACTTCATGACACCAGATAACCGCGCGTACCCTACCGCTA
CACCGTCGACTGGCTACGCTCAGATGAACTACTCTGGGTATGCCTCGCAC
CCAAACCCAGCAACCCAAGCTACTCCTTCGCCATCGCAAAACTTTCAACG
GGCCCCGAATGCCTCCTCTTTCCCTCCTTCGCAGCCTTTTACGCAAACCG
CAGCCCGGGTGCCGCCTTACCAAGGCCAGCCTAACTATGGGGGAACTTAT
ACTCCGCCTACCGCTCAACCTGGGTCTATGTATCCTTCGGCCATGCCTAC
CCAGCAGCCGGTCAACCAGCCAGTTCAGACGCCCATGGTTGCCCCACCTA
TGCGCTGGGGGTTTGAGCATACGGGACCGACAGGCTCTTTCGCCGGAACT
CAGCGCGGCGGACGCTTCAATGGTCATAACGCTCAGTCACACAACGGGGA
TAGAACAACGCACTATGCCAACAAACGCGATCATAATGCAGCCTTTGGAA
AACCCCAGTCTGTCGCACCGCGAGTTCCCGCACCGCCTCCGGTTCCAAGC
TTTGGAAACCCACTCCCTGTCAAACCCCCGCCACCCGCTGATGCCACAAG
GAAGCCAAAGAAGAAGAAGAGAAAGCACAATCAGCTTGGACTGACCCCGA
GAACCGAAGAGCATGAGTCGAGCGAGGAGGAAGACGATGTCGATGAAGAA
GCGAGGTTAGCCGGAGCAGCTGCCAACACCACAGCTCTCAAGGTCACATA
TCGCGGGAAGACTTCCACACTGCAGTCGCCAGAGGAAATTGCTGCCTGGA
TCGAGGAACGGCGAAAGCGGTATCCGACGCAGGCGAAAGTGGAAGAGAAG
AAAAAGGCCATGGAAGAGGCGAAGAAAGCACGCCAGGAAGTACAGCGGCA
GAAGGATCAGCGAAAGCAAGAGTCCAAACGAGCGCAGAAGGACGGTCGAA
ATAAGAAAGCAAACGACAAGCAGCCTAATGACCAACCGGTCGACCCCATG
GATGCTGCGGCAAAGGCCAAGGAGAAGGCGGACAGACTACGGCGGAAGCT
CATGAAAGAAGAGAAGCGAGTGGCCAAAGCCGAGGCTGATGCTGAAAGGG
CTCTAATGAGGGCTGAGGCATTGCAAAAAGGTTCGGCCGATGCCAACATA
GACGAAACTTTGGCCACTGGACAAACCCAACCGGCTTCTGCAACCGGGAC
CAAGGCAGATGCAGGTTCGGAAGACAAATCTGTCAAACCCGGGCCTGCTG
CGGCCGAGGAATCAGGAGTCGCCAACGGCCATACGACGTCTGCAACAGAT
GTCAATATAGACGCCGGGAAGCCCGAAGAGGCTGGGGACGAGGTCAACAT
CTCGTCTCAAGATGACTCCGATAGCAGCGATTGGACGTCGTCGAGTGGGT
CAGATTCCTCCTCGGATGAATCCGACAGTGACTCGGACTCTGCGCCGGAG
GAGGCGACCTCTCGACGAGAAGGACCCGAGCGGGTACCGCCACCCCCTCG
CGAGAACAAGAAAAAACCATGCCATCACTTTGCTCGAACCGGTCGCTGCA
GGAACGGAGATAAATGCCGATTTTCGCACGAGACACCTGAGCGAGGGAAG
AAAGCGAAGCCAACGGAGTCTAAGGGGCGAAAGGGGCTTCTACAAGCGCT
TCTGGACCGCCAAAAGGGAGAAGAAGACCGAAAAGTCATGGAAGCAATTG
CATGGCTCGGAGAAAACGGATTCCTAGATGCGCCAAAGGACCAAGAGGAA
GCTAACAGGTCGATATCGGTGACCGACGGCGCGGAGGCTCCGCAGCAGGC
AGCCCCCAAGGATACAATCTCGGGGCAAGAAACCGATGCTGCCCCAGTGA
CTGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007028-T1.utr5p1 | KJC3_007028-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036855 |
| DBxref | InterPro:IPR019496 |
| DBxref | InterPro:IPR000571 |
| DBxref | PFAM:PF18044 |
| DBxref | PFAM:PF00642 |
| DBxref | PFAM:PF10453 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1256601..1260543 + |
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