|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1261239..1262360+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007029-T1 ID=KJC3_007029-T1|Name=KJC3_007029-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1122bp|location=Sequence derived from alignment at ch5:1261239..1262360+ (Aspergillus niger KJC3)
TTCGTTCCTTCCTCTTCTCTCCTCTTTCTCTCTTTCCTTCCTCGTGCGAT
TTCCCCATTCGACGTCTGTCCTTCGTTCTTTCGTCGTCTGCATCCACTGA
CTCACCCGGTTCACTCTTTTTGACCGTCGAGACTATCACTCTTCTCTCTC
TCTCTCTCCCACTGAGAAGTCATTCTTTTACTTCTGTACCACCCACACTT
GCATCGCGTATTACGCCTGTATATCGAATACTATCCATTCCCCGCTATTG
TACCGAGTCATTCTACTACTCACATATACTTCTCCACCAACATCCATCAA
TATGCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGG
CTGCTTCCGATAACCCGTTCAACAACCCCGAGGGTGGCTACACCTTCACC
GCGGGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGT
CACCCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAAC
TCATTGCCGGTAAGCTCCTGTCATGGATGTGGTGTGAAAAGCTTCGATGA
GATGCTAACGAGAAGAATCAGGGAACATCGACAACTCTGGTAGCTACTCT
TGGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACACCATTGAGAT
CATCGATGATGATGACACGGACGATGTCAACTACACCCCGCGCTTCTCAA
TCTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCCTCGTCAACCACG
TCTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCTCCACCGTGAG
CGCCACTACTCTGTCTACTACCACCTCGAGCGCTAGCTCTTCCACCTCGA
CCACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCGTCCTCCAAGACT
GCCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTTCTACCGCCAG
CGTTACCACCGTCTCCACCAATGCCGGTATGGCCAACCAGGCCTCTATTG
GCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATCTAAAACTACGAC
GTTCTGATTCTTCTGCCCGGCTGAGGGCTGCCATTTCCGTGGTCGGGTGA
TGATACCTTTTTTTTTTTTTTT back to topCoding sequence (CDS) from alignment at ch5:1261239..1262360+ >KJC3_007029-T1 ID=KJC3_007029-T1|Name=KJC3_007029-T1|organism=Aspergillus niger KJC3|type=CDS|length=1356bp|location=Sequence derived from alignment at ch5:1261239..1262360+ (Aspergillus niger KJC3)
ATGCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGGC
TGCTTCCGATAACCCGTTCAACAACCCCGAGGGTGGCTACACCTTCACCG
CGGGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGTC
ACCCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAACT
CATTGCCGGGAACATCGACAACTCTGGTAGCTACTCTTGGACTCCTTCTG
CCAAGCTTGCAGCCCGCTCGGACTACACCATTGAGATCATCGATGATGAT
GACACGGACGATGTCAACTACACCCCGCGCTTCTCAATCTCTGGTGCTAC
TGGAGCGGTGACCACCAGCACTGCCTCGTCAACCACGTCTTCCGCTTCTA
GCACCAGTTCTTCCACCGAACAGACCTCCACCGTGAGCGCCACTACTCTG
TCTACTACCACCTCGAGCGCTAGCTCTTCCACCTCGACCACCACGGCTAG
CTCGAACTCCACCGTTTCGGCGTCGTCCTCCAAGACTGCCTCGTCCAGCT
CTTCGAACACCGCGAGCTCCAGCGCTTCTACCGCCAGCGTTACCACCGTC
TCCACCAATGCCGGTATGGCCAACCAGGCCTCTATTGGCATGATGGCCCT
TATCTTTGGTGCTGTTGCGCTCATCTAAATGCGTTCCGTCTTCTACCTTG
CTCTCAGCGCCATTGCGTCTCTCGCGGCTGCTTCCGATAACCCGTTCAAC
AACCCCGAGGGTGGCTACACCTTCACCGCGGGCAGCCCGACTACTCTCAC
CTGGGACCCAACTACTAATGGCACGGTCACCCTGAGACTCCAGTGGGGTG
CTGTTTTCACCACCACCTCGGGCGAACTCATTGCCGGGAACATCGACAAC
TCTGGTAGCTACTCTTGGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGA
CTACACCATTGAGATCATCGATGATGATGACACGGACGATGTCAACTACA
CCCCGCGCTTCTCAATCTCTGGTGCTACTGGAGCGGTGACCACCAGCACT
GCCTCGTCAACCACGTCTTCCGCTTCTAGCACCAGTTCTTCCACCGAACA
GACCTCCACCGTGAGCGCCACTACTCTGTCTACTACCACCTCGAGCGCTA
GCTCTTCCACCTCGACCACCACGGCTAGCTCGAACTCCACCGTTTCGGCG
TCGTCCTCCAAGACTGCCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAG
CGCTTCTACCGCCAGCGTTACCACCGTCTCCACCAATGCCGGTATGGCCA
ACCAGGCCTCTATTGGCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTC
ATCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007029-T1.utr5p1 | KJC3_007029-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007029-T1.utr3p1 | KJC3_007029-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR018466 |
| DBxref | PFAM:PF10342 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1261239..1262360 + |
|
