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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1267768..1270537+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007031-T1 ID=KJC3_007031-T1|Name=KJC3_007031-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2770bp|location=Sequence derived from alignment at ch5:1267768..1270537+ (Aspergillus niger KJC3)
ACTTGATCTTCCAACGCAACCCATTCTCCAGTTTATTTACCAACCCAATT
TCACCATGTCTGCACCGGCACCTGATTATCAGGACCAAGTTGAGTTGGCT
CTGAGACTGCGAAATACCATGGTTGCACGGGCATCCAACCCCCAGGACCA
AGTTGAGCTTCCTCTGCGACCGCGAATCAACATGACTGCTGCATCGGCAC
TCAACAGTCAGGACGAACTTGAGCTGCCTCTACGGCAGCTTCCTCTTACG
TTCGCGATAGACGTTTCGGGGAGCACACTGGGACCGATCCTTCGGCAAGA
GCAAGATGCTATTCGGGAAATCTGTGGAGATTCCATGCCGCAGGAGTTGG
TGTCACAGTCAAGTATTCTTCCTTGGTGCCACATGGCCTTCCCGCCGATG
CGTATAGCAGACGTCGAGGATCTCAGTTCCGATGGCCAAACCGATCCTGG
GGCTTTGCTGAACAACCCCGCTTGTAGGTCTACACTCCAAGACGCTAGCC
TATGGTTTCTCTTGACGGACGGCCACATCCTCGAGCCACGAGTTCAGAAG
TTTGCCCATGCCATCTCCGCTGCCGGTATTCACGGCAAAGCCTGCGTAAT
TATTCTGTTTGGATATCCGCAAAGCTCACCTTTCCGCTGCAATATCTCGG
TTGGCATGTCGGTGTTTGCCGTGGCGCCACATTGCATCTTTCTCTTCTCG
GATGTGATAACTGGCATGATATTCGTGCTACAAGCTAAGGGAAGTTTCTT
GGATATACTCCCGGCAGAGAAGCGATTTGTGCCGTTTGGGGAGGGGACGA
AATGGGCGGACCTGGTGACGATCAGGTACGACGATCTCAAAAGGGTCAAG
GTCCCAAGACCCACCAAATTATCCCGGGATATAGTCATACTCCCAAACGG
CGTCCATTTTGACTTGAATAGTATTCATACTGGCTCCATATCCGAAACTG
ACACACTTAACCTGCTATCGGACTACGCCGCGTTAGATGTGGTCATTCTG
GCCGCGGAGACAAGGGGTCAACATGACAAAATTCAAAAGTGGATTTTGAA
CTCCCGTCGGACAATAAATCCGATGAAGAAGATCCTGCTTGAACCACGTG
AAGACTTAGATGGTGAAGCAAAAATTGTACTCCTCACCCTTCTGACTTTT
TTGGGCGGAGACGGATCACTCCCACGGTCTCTGTGGCAAGCGTTTCTAAA
TTCAAATAAGTCCTCAACTGCTGAGTTCATCAAGTCAGAACTCCGTAACC
AGCATCGACGGAATTGGGAGCATTTGGAAAAGAATGTCAGAGCAGCTCGT
GATTATTCTTCCCGGTTGAAGAGGACCCTTGAGGATGTCTTGGAAAGATT
AAGCGGATTAACTCTACGCCAGTCTTCAATGTCCCCAAGCGATCTAACTC
CAATGAGCTCGCCAAATGCAGCAGATATGCGATCTATTGGAGCCGCGCTT
TCGTTTCAACAGAGATCCAGCCCACTTGCAAAGGTTTCCGGGTCTCCATA
TGATGAACCGATAGACTGCGAATGCCTGTTTTTACCAGGATATAAAGACA
GCAGAAACGTCGCTGCAGGATGTGCAGCCCCCCAGAACTACCAAAAGTGT
CCTATATGTGGGACTGATCGGGCAATACAGTGTCTTCTCCTCCAGACCCC
ACGCGACTACAATGGCACACACCATGTTCCACAGGCCAATAGCTGTGCCG
CACACCGCTATCCAATGGTCTTGGGTAGCTACCCCGAGACTGATGTTATT
TTGCCTCTGTCAGCATGTGATGCTTGCGCTTGGTTACTGCTCCAGGTTAG
AGAACTGCCCAATGGTCAGCGTGTTGATGCTGCGCTGCCGCTGGTCTCTC
TCGCCACGGATGTAAATCGACGGCAATGGGTTCGAACCCTTAACCGAGTA
TATGAACGCCGCTTTCATGAGGGCATCATTCTCTATGCCTTTCTATCTTC
TGTTTGCTTTAAGATGGAAGACATATCCAAAGAGAAGGAGACCTCCTCTA
CCCTGATGGAGTGCCTTGAGTGGTGCTGCAGAGAAATTAGCAGCCTTCCT
GGCGAGCCTATGAAGGCCGGTCTCCTACCGCCTCCAGAATCGATGCCGGC
CGTTAATTGTAGATTGATGACGTTACAGAAGCTTTTTATAGCAGCGTTCA
CTCATTCTCGCACAGACAATTGGCTTTCAAACTTCCTACATTATCCTATT
GAGGGATCCGTCGTTTTGGTCCGCATCGCCAGTCAGATGGAGGCCATAGC
TCCTCACATGATCGAGATCTACGTGTGGAAACGGTTGCTCTACCAGATAG
CTGAACATTACTCAGCGTTGCGCAGAGAGAATGGGCCCAAAGAGGCTGAG
TTATCCCTCAAAACGACACTCGGTGAGCCATTCCTATCACCGCCTGGACG
GGCAAGTGCAGCCCATACTGGCCTATTAGTAGAACTGTTTTCATCTTCTT
ACTCAATTTCTGTGGCTCAGTTGGGTGACCATCTTCCATCACTTGATCAG
TTTCGACGCCTAGGTAATTACTTTGCGCCCATTGAGAGAACGACCAAGTA
TCACGCTGCCCTGGCTGTCTTCCTGCACATCATGTGGAAAGTCTCAGCTC
TACTCCAGGATAACCACCCTGAAGTGGCGTATTTTGTCACGTACATAGAG
AGCTACGGTCTCAAGGTGCAGCAGGCAGATAACCCACTCTGCAAGGTCTT
TGATGAACCAACGCTGGTTGGAGACGGCGACGTTGAGAAGATGATCAAGG
ACGTGTACGAGTTGTGTTGA back to topCoding sequence (CDS) from alignment at ch5:1267768..1270537+ >KJC3_007031-T1 ID=KJC3_007031-T1|Name=KJC3_007031-T1|organism=Aspergillus niger KJC3|type=CDS|length=2115bp|location=Sequence derived from alignment at ch5:1267768..1270537+ (Aspergillus niger KJC3)
ATGTCGGTGTTTGCCGTGGCGCCACATTGCATCTTTCTCTTCTCGGATGT
GATAACTGGCATGATATTCGTGCTACAAGCTAAGGGAAGTTTCTTGGATA
TACTCCCGGCAGAGAAGCGATTTGTGCCGTTTGGGGAGGGGACGAAATGG
GCGGACCTGGTGACGATCAGGTACGACGATCTCAAAAGGGTCAAGGTCCC
AAGACCCACCAAATTATCCCGGGATATAGTCATACTCCCAAACGGCGTCC
ATTTTGACTTGAATAGTATTCATACTGGCTCCATATCCGAAACTGACACA
CTTAACCTGCTATCGGACTACGCCGCGTTAGATGTGGTCATTCTGGCCGC
GGAGACAAGGGGTCAACATGACAAAATTCAAAAGTGGATTTTGAACTCCC
GTCGGACAATAAATCCGATGAAGAAGATCCTGCTTGAACCACGTGAAGAC
TTAGATGGTGAAGCAAAAATTGTACTCCTCACCCTTCTGACTTTTTTGGG
CGGAGACGGATCACTCCCACGGTCTCTGTGGCAAGCGTTTCTAAATTCAA
ATAAGTCCTCAACTGCTGAGTTCATCAAGTCAGAACTCCGTAACCAGCAT
CGACGGAATTGGGAGCATTTGGAAAAGAATGTCAGAGCAGCTCGTGATTA
TTCTTCCCGGTTGAAGAGGACCCTTGAGGATGTCTTGGAAAGATTAAGCG
GATTAACTCTACGCCAGTCTTCAATGTCCCCAAGCGATCTAACTCCAATG
AGCTCGCCAAATGCAGCAGATATGCGATCTATTGGAGCCGCGCTTTCGTT
TCAACAGAGATCCAGCCCACTTGCAAAGGTTTCCGGGTCTCCATATGATG
AACCGATAGACTGCGAATGCCTGTTTTTACCAGGATATAAAGACAGCAGA
AACGTCGCTGCAGGATGTGCAGCCCCCCAGAACTACCAAAAGTGTCCTAT
ATGTGGGACTGATCGGGCAATACAGTGTCTTCTCCTCCAGACCCCACGCG
ACTACAATGGCACACACCATGTTCCACAGGCCAATAGCTGTGCCGCACAC
CGCTATCCAATGGTCTTGGGTAGCTACCCCGAGACTGATGTTATTTTGCC
TCTGTCAGCATGTGATGCTTGCGCTTGGTTACTGCTCCAGGTTAGAGAAC
TGCCCAATGGTCAGCGTGTTGATGCTGCGCTGCCGCTGGTCTCTCTCGCC
ACGGATGTAAATCGACGGCAATGGGTTCGAACCCTTAACCGAGTATATGA
ACGCCGCTTTCATGAGGGCATCATTCTCTATGCCTTTCTATCTTCTGTTT
GCTTTAAGATGGAAGACATATCCAAAGAGAAGGAGACCTCCTCTACCCTG
ATGGAGTGCCTTGAGTGGTGCTGCAGAGAAATTAGCAGCCTTCCTGGCGA
GCCTATGAAGGCCGGTCTCCTACCGCCTCCAGAATCGATGCCGGCCGTTA
ATTGTAGATTGATGACGTTACAGAAGCTTTTTATAGCAGCGTTCACTCAT
TCTCGCACAGACAATTGGCTTTCAAACTTCCTACATTATCCTATTGAGGG
ATCCGTCGTTTTGGTCCGCATCGCCAGTCAGATGGAGGCCATAGCTCCTC
ACATGATCGAGATCTACGTGTGGAAACGGTTGCTCTACCAGATAGCTGAA
CATTACTCAGCGTTGCGCAGAGAGAATGGGCCCAAAGAGGCTGAGTTATC
CCTCAAAACGACACTCGGTGAGCCATTCCTATCACCGCCTGGACGGGCAA
GTGCAGCCCATACTGGCCTATTAGTAGAACTGTTTTCATCTTCTTACTCA
ATTTCTGTGGCTCAGTTGGGTGACCATCTTCCATCACTTGATCAGTTTCG
ACGCCTAGGTAATTACTTTGCGCCCATTGAGAGAACGACCAAGTATCACG
CTGCCCTGGCTGTCTTCCTGCACATCATGTGGAAAGTCTCAGCTCTACTC
CAGGATAACCACCCTGAAGTGGCGTATTTTGTCACGTACATAGAGAGCTA
CGGTCTCAAGGTGCAGCAGGCAGATAACCCACTCTGCAAGGTCTTTGATG
AACCAACGCTGGTTGGAGACGGCGACGTTGAGAAGATGATCAAGGACGTG
TACGAGTTGTGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1267768..1270537 + |
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