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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1290281..1291220+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007040-T1 ID=KJC3_007040-T1|Name=KJC3_007040-T1|organism=Aspergillus niger KJC3|type=mRNA|length=940bp|location=Sequence derived from alignment at ch5:1290281..1291220+ (Aspergillus niger KJC3)
GAAAAAACGGCCCTCTCCAGAACCCTCATCTCCAAAACCTCAATCAGTCA
GCACAGACTCAACCTTTCCACAATGCCTGCCGGAATGTACGTCCCAATAT
CCCTTCCATTGCTATTACACCCTATCCCAGACAGATCCATTCGCTCATCC
ACCCCCACCACTACCTAACTACCCCGATCACCCCCATCCCATCCATCGCA
AGATAAAACCCCCAAAGACATTGACTCACACCTCGATAAAATCACAGCTT
CAACTCCACCTACTACGGCAAAGACTACCGCGCCGGAGCGGCCCTTCTCC
GTGCCCGTCGCCCGTATCTATTCAAGAATGCCTTGACGGGTCTTGCCTTG
GTGTCTTTTACCATTAGTGTTTGTACGTCCAGACCTTCTATCCAGCACTG
TTGCTGCTTCTTGTTGTGGATGCGCGCATGCGCAAATTCTATCCCAAGAT
GATCTCCAGTCCCCTTGACATATATTCAAAAGAATGCTGAATGGCTAATG
TTATCTCCCGTGGTTGCATAGACGCCTACACCATCCGCGCCGTCGGACAG
GATGAGTTCTCGGACGTGAAGGTTCCCGATGAGCCGGCTAAGAAGCAATG
ATTGCTTTACTTTGACTCGATCGATTGATTGGATATTGCGTTTGCGAAAT
ACTGTTGTTGTTTTACCTCCGGTTTCATCATATGCTGATTGAGCTGTGCA
TGGATTGATAATGGTGTATTGGGATTGGAGTTAGGTTGAATACTATGAAT
CTACTGTATATTTATCTTTTTGTGTTGGATTTGTGCTGGGTTTGGGTGCG
CAAGTGGTGGTAGGCTGATTGTGGTGGATGGTTGGGATGCTACGGAAGGG
AAGAGGTGGATGTGTGTAAATGAATGGTGTTGCTGGTCTAGTGGAAATCT
CTGCTCGCTTCTTACTTTTTTATCTGTATATTATTCGAAG back to topCoding sequence (CDS) from alignment at ch5:1290281..1291220+ >KJC3_007040-T1 ID=KJC3_007040-T1|Name=KJC3_007040-T1|organism=Aspergillus niger KJC3|type=CDS|length=657bp|location=Sequence derived from alignment at ch5:1290281..1291220+ (Aspergillus niger KJC3)
ATGCCTGCCGGAATCTTCAACTCCACCTACTACGGCAAAGACTACCGCGC
CGGAGCGGCCCTTCTCCGTGCCCGTCGCCCGTATCTATTCAAGAATGCCT
TGACGGGTCTTGCCTTGGTGTCTTTTACCATTAGTGTTTACGCCTACACC
ATCCGCGCCGTCGGACAGGATGAGTTCTCGGACGTGAAGGTTCCCGATGA
GCCGGCTAAGAAGCAATGAATGCCTGCCGGAATCTTCAACTCCACCTACT
ACGGCAAAGACTACCGCGCCGGAGCGGCCCTTCTCCGTGCCCGTCGCCCG
TATCTATTCAAGAATGCCTTGACGGGTCTTGCCTTGGTGTCTTTTACCAT
TAGTGTTTACGCCTACACCATCCGCGCCGTCGGACAGGATGAGTTCTCGG
ACGTGAAGGTTCCCGATGAGCCGGCTAAGAAGCAATGAATGCCTGCCGGA
ATCTTCAACTCCACCTACTACGGCAAAGACTACCGCGCCGGAGCGGCCCT
TCTCCGTGCCCGTCGCCCGTATCTATTCAAGAATGCCTTGACGGGTCTTG
CCTTGGTGTCTTTTACCATTAGTGTTTACGCCTACACCATCCGCGCCGTC
GGACAGGATGAGTTCTCGGACGTGAAGGTTCCCGATGAGCCGGCTAAGAA
GCAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007040-T1.utr5p1 | KJC3_007040-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007040-T1.utr3p1 | KJC3_007040-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265KSE |
| DBxref | InterPro:IPR018628 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1290281..1291220 + |
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