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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1295492..1296332- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007043-T1 ID=KJC3_007043-T1|Name=KJC3_007043-T1|organism=Aspergillus niger KJC3|type=mRNA|length=841bp|location=Sequence derived from alignment at ch5:1295492..1296332- (Aspergillus niger KJC3)
CTGTCCGATTGCCAGCCATTGACAGTCGATCCCTTCATAACGGTCGCTCG
GAATCCGGCCTTGCTATCTCTCGTCTCACTGATCTGTTCCATTGCCGCTC
CGGAGGCCAGGGTTCTCATAAGATGGCTACCACACAGGGTGTCAACGTGA
GTGTCATCAGTATCCGCCCTGGACCCATTGTGATGATACAGGACCCTCGA
GGTTAACCCGCTCCCTTCGCCCATCCAGGTTCTGCGCTATTCGGCCCTCG
TTGCCGGTCTCGTCTACGGTTTCTACCACCAGTCTTCGATCACCGCCACT
GCTAAGCACGCCGAGGCCGAACGTGAATATGCCCGCCAGGAGCGCCTGAT
CGAGCAGGCCAAGGCAGAGTGGAAGAAGAAGACGGCGCCCAAGGACACGC
AAAACAGCGGAGGTACGTCTTGGTGCTAGCCCTTATTCTGAATCCCCTTT
CCCAGTGCCGAATTGCTGTCCCCATTGATAAACCCCCCAGCGGCATGTAC
CGGACCCCAAAATGCTAACTAGGGAACGTGCACAGTCATTACGGATCCCG
AGGACAGCCGGTTTGACCTTGAGGCTTTCCTGAAGATGAAGGCTGGCGAG
AACTAGAATGGAATCGAAGTATACGGCACGCAGATGAAGTTGCAGTTATC
TCTCTAAGAGCCGTACCTCTTGAAGGTATGGGCGAGAGATCTCGGGTCGG
CCCCGATTATGTATTATTGTTTGGTCTAATTTCCCAGAGTCGTGTCATTG
CGAGCGAAAGGAATGATTTTTCTTTTTCCACTATAGACATCATCCCCGCA
TCTTGTACATACCCTGGGCTGTTGTGCGTCTGTATCACTAC back to topCoding sequence (CDS) from alignment at ch5:1295492..1296332- >KJC3_007043-T1 ID=KJC3_007043-T1|Name=KJC3_007043-T1|organism=Aspergillus niger KJC3|type=CDS|length=837bp|location=Sequence derived from alignment at ch5:1295492..1296332- (Aspergillus niger KJC3)
TCATTACGGATCCCGAGGACAGCCGGTTTGACCTTGAGGCTTTCCTGAAG
ATGAAGGCTGGCGAGAACTAGGTTCTGCGCTATTCGGCCCTCGTTGCCGG
TCTCGTCTACGGTTTCTACCACCAGTCTTCGATCACCGCCACTGCTAAGC
ACGCCGAGGCCGAACGTGAATATGCCCGCCAGGAGCGCCTGATCGAGCAG
GCCAAGGCAGAGTGGAAGAAGAAGACGGCGCCCAAGGACACGCAAAACAG
CGGAGATGGCTACCACACAGGGTGTCAACTCATTACGGATCCCGAGGACA
GCCGGTTTGACCTTGAGGCTTTCCTGAAGATGAAGGCTGGCGAGAACTAG
GTTCTGCGCTATTCGGCCCTCGTTGCCGGTCTCGTCTACGGTTTCTACCA
CCAGTCTTCGATCACCGCCACTGCTAAGCACGCCGAGGCCGAACGTGAAT
ATGCCCGCCAGGAGCGCCTGATCGAGCAGGCCAAGGCAGAGTGGAAGAAG
AAGACGGCGCCCAAGGACACGCAAAACAGCGGAGATGGCTACCACACAGG
GTGTCAACTCATTACGGATCCCGAGGACAGCCGGTTTGACCTTGAGGCTT
TCCTGAAGATGAAGGCTGGCGAGAACTAGGTTCTGCGCTATTCGGCCCTC
GTTGCCGGTCTCGTCTACGGTTTCTACCACCAGTCTTCGATCACCGCCAC
TGCTAAGCACGCCGAGGCCGAACGTGAATATGCCCGCCAGGAGCGCCTGA
TCGAGCAGGCCAAGGCAGAGTGGAAGAAGAAGACGGCGCCCAAGGACACG
CAAAACAGCGGAGATGGCTACCACACAGGGTGTCAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015986 | ATP synthesis coupled proton transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015078 | proton transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007043-T1.utr3p1 | KJC3_007043-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007043-T1.utr5p1 | KJC3_007043-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008386 |
| DBxref | PFAM:PF05680 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1295492..1296332 - |
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