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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1306307..1308422+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007048-T1 ID=KJC3_007048-T1|Name=KJC3_007048-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2116bp|location=Sequence derived from alignment at ch5:1306307..1308422+ (Aspergillus niger KJC3)
TTATATAACTGAAACGATCGACTTTGTGGAAGCCCAGGAATAATTTGCTT
CTTTGAAAACCCCCGCAAAACAAGTATAAAAGACAAAGTCCTGCCTGAGG
TTGGGATCCGCGGAATCCCTGCTTGATTGGAATCTTTGAGAGTTTAAAAC
CCTTCGCAGTTCTTCTGCACGCAGTTATCTCTGCTATCTATCTATCTGCT
ATCTAGAAATTCCTCCAAGGATCGCCTCTCCATTCCAATGGATTATTTGC
TCTCCTCTTAATGGCTCGCAGTGGACTCCATGGCTCCATCTGGCCCCCCC
GCGTCTTCTTGACCCACGCCGATTCTTCGGGCGAAGGGAGCCAAACAGCT
CCGTGAGGAGATCCATGGGATCAAAGGAAGGGGACCTGAACACCTGCGAT
GGCCACGCTACTGATTCTGACTGACTGATCGTCTGTCCTCTCCTTTCCCC
TTGTTCTGCCATATAGAAGATGGCTCTATCCTCCTGATCTTCAATCAGTT
TTCTCCCTCTCGACTTGCGCGCCTGTGACTGCTCGATTCTGTGCTCCCGT
ACCTGCTGGCTGTGATTGATCCAATCTTCCTTTTTCACCGCCGCAGCTTT
TCTCCCCCCAAACCCAGCTGTCGACAGAGCTCCCCTCTTAAAGGACTTGC
AGCTGCCACCTCAGCATTTCCTCTAGGCGACTTGCGCAATCCAGTCTCCT
TTCTTCACTCCAAAATGGTCGCACTCATCCCCCCTCCTGAGCCCCGCACT
TTGCTGCCACCTCTACTCGCCTGTCTTCCTACGGCTTTCGTATCGCCTCA
ACCCCCTCCGGCTCTGCTGCCCCTCCTGTCTCCCATTCTACGTCAACGGG
TTAAGATCCTAAGCTCAGTATCTGCCTCGCCTACCGAATCATGGCTTCGA
CTGCTGTGCTGGGATGCTGGACAGGCTGAGCGCCTTCAAACATTGGTGGA
TGGCGCAACCTTCGAGCCGCACCCGGTGTCGGGTGAGATTGAGCTTCCCG
ATGAGCTCCCGGTCAGGTACATGCGTGTGGACGAGGAGACCCTACGGTCG
CGCGTGATCCTTCCCGAATTCAGCCTGAAGATCATCTACCTCTGGTGCCC
CGAGGATCAGGAAGGCGGAGGCCCCGCGTGGCGGGTAGCAGAACTGTTGC
CGCAAGAGGGCAACGTCGACGATGCTGAAGACTGGTCTGTTTCCATCGGG
GAGGCAAACGCTCGCCAGAAAGACCGCCTGCTCGAGGATGCCCTGAAAGC
TGGCGAGGCTGCTGAGCAGGCAAAGAACCAGAAAGAGGAGGAAGATGATG
ACGATGACTACTGGGCTCAATACGATGCAACCCCCGGACGAACTCCAGCA
AACAAGACGCCCGCTCCTAATGCCGTCTCATCCCTGCAGCAGTCAGAAGC
GGATTACTTTTCTCGCTACGGCGATGTGCAGCCCGCGTTGGACAACCATG
ATCCTGAGGAGGAACAACCCGAGGTTGGACCATCCTCCCTCAATGGCGAT
ATGCTGGCCAAACTGCTTCAGCGCCAATTCAGTGGAGATGAAGGTGACAA
GCCGACCCATACCTCAAACGGTGTCGCTGCCAATGGAGAACATGCTGGCT
TGAACCACCCCCGACCCTCTTCCATCTCGTCTGCGAGCTCCGAAGCCGTG
GCCAGGCTCGAACAAGAGGCGGAGAACCAGTCGGCGTATGAAGTGGGTGT
CAAACAGCACATTGGCTCGAGCATCAAGGGTCTGTTCCGACTGGCCAAAG
CTACAGGCATCTCGCGCAGCGACTTCCAGTCACTTGTCAAGACGGAACTT
GAATTACTGAACGTGTCGGACGACGACTGAGATAGTTGTATTGGGGCTTG
TTTTTCTTTCTTAATTTCTCAAATTGTATATACTGCATGCGGTCATGTTC
AGCGTTGAGGTGCATTGATTTGGCATTGGATATCCCCGGGTAGTTTTGAG
GAATACGTTGATCGGGTTCATCAGCACCACTATGATAACATTATATAATT
GTCTAGCTCAAATCCAAATATTGAAATTCCGACGGATAATGACGATCACA
TCCTGGACGCAAAACTGCTCGAACTGCTGAAGTACACGTGTTTCATCGCG
CGACGTTTCCCATAAA back to topCoding sequence (CDS) from alignment at ch5:1306307..1308422+ >KJC3_007048-T1 ID=KJC3_007048-T1|Name=KJC3_007048-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch5:1306307..1308422+ (Aspergillus niger KJC3)
ATGGTCGCACTCATCCCCCCTCCTGAGCCCCGCACTTTGCTGCCACCTCT
ACTCGCCTGTCTTCCTACGGCTTTCGTATCGCCTCAACCCCCTCCGGCTC
TGCTGCCCCTCCTGTCTCCCATTCTACGTCAACGGGTTAAGATCCTAAGC
TCAGTATCTGCCTCGCCTACCGAATCATGGCTTCGACTGCTGTGCTGGGA
TGCTGGACAGGCTGAGCGCCTTCAAACATTGGTGGATGGCGCAACCTTCG
AGCCGCACCCGGTGTCGGGTGAGATTGAGCTTCCCGATGAGCTCCCGGTC
AGGTACATGCGTGTGGACGAGGAGACCCTACGGTCGCGCGTGATCCTTCC
CGAATTCAGCCTGAAGATCATCTACCTCTGGTGCCCCGAGGATCAGGAAG
GCGGAGGCCCCGCGTGGCGGGTAGCAGAACTGTTGCCGCAAGAGGGCAAC
GTCGACGATGCTGAAGACTGGTCTGTTTCCATCGGGGAGGCAAACGCTCG
CCAGAAAGACCGCCTGCTCGAGGATGCCCTGAAAGCTGGCGAGGCTGCTG
AGCAGGCAAAGAACCAGAAAGAGGAGGAAGATGATGACGATGACTACTGG
GCTCAATACGATGCAACCCCCGGACGAACTCCAGCAAACAAGACGCCCGC
TCCTAATGCCGTCTCATCCCTGCAGCAGTCAGAAGCGGATTACTTTTCTC
GCTACGGCGATGTGCAGCCCGCGTTGGACAACCATGATCCTGAGGAGGAA
CAACCCGAGGTTGGACCATCCTCCCTCAATGGCGATATGCTGGCCAAACT
GCTTCAGCGCCAATTCAGTGGAGATGAAGGTGACAAGCCGACCCATACCT
CAAACGGTGTCGCTGCCAATGGAGAACATGCTGGCTTGAACCACCCCCGA
CCCTCTTCCATCTCGTCTGCGAGCTCCGAAGCCGTGGCCAGGCTCGAACA
AGAGGCGGAGAACCAGTCGGCGTATGAAGTGGGTGTCAAACAGCACATTG
GCTCGAGCATCAAGGGTCTGTTCCGACTGGCCAAAGCTACAGGCATCTCG
CGCAGCGACTTCCAGTCACTTGTCAAGACGGAACTTGAATTACTGAACGT
GTCGGACGACGACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007048-T1.utr5p1 | KJC3_007048-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007048-T1.utr3p1 | KJC3_007048-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1306307..1308422 + |
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