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KJC3_007053-T1, KJC3_007053-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007053-T1
Unique NameKJC3_007053-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1321723..1324597-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007053-T1 ID=KJC3_007053-T1|Name=KJC3_007053-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2875bp|location=Sequence derived from alignment at ch5:1321723..1324597- (Aspergillus niger KJC3)
CTTCGTTCTGGCCATCCTTCCTTGCAACTGACTCGCCATCTGCCTGTGGG
CATATCTTCGCCGGTCTGGCTCTGTCGTCTGTGCTAGAGAGATGTTTAAT
CCAACCTTCGGCTAGTCAGCCAGGGTCTTGACACAAACCCTCATCACCGG
CCAAAGCGACCCCGCCGTTTGCCCCCTGCAGGCGGTCTGCACCTCTTCCC
CTCGTCAGGTACATCACTTCGCGATTGTGGCTCGAGCGGACTTGCAGGCC
CAAATCAATCAGCGCTATACCTTTTTTCATGCTCCATCATGCCTAAAGCT
AATCCAGCCCCTGGGGGCCGACTCCGCTGCAGACGCGCGTGCGATAGTTG
CAAGCGGAGGAAACAAAAATGCAACGGAGAACAGCCATGTACTATCTGCA
TTCAACGGCGCAAAGAGTCCGAATGCCACTTCTCAGACAAACCGGCAAGA
TTGCTCAAACCGAATAACAGCAGCTCTAAGGACACCATGCTTCTCAGCGA
ACGCTTAGTCCCGACCCCACAGCGTCAGACCGCCATGGACCGACTCCTGA
ACTCGCTCGAAGACCGGAGCGCCAATCTGGAACAACAGGCTACAGATGAC
AAAGAGGGAACAGCGCCAGTGCCCAAGGTTGCCAGGCTACTGCGTGATGG
TCAAGGCAAATTCATGTACGTTGGCGACTCCGCCAGCTTGTCTTTCCTAC
AGAGTGTGCGGAGGATCGTATCGACCTCTATCGGCAGATGCGAATTCACG
GAGGACAACTCGCGACATTCGATGCTCGAGGCATTCCAGAGTGGATCTAC
AACGCAGACAGGACCATTGATATCGCCACCAAGCAACGAAGAGGCTCAGA
GGCTGGCGCGCCAATTTGTGCTGGCCACAAGCCCGCTGCTGGATCTGTTC
GACCTCAACGAGTTTCACCCCCGGCTTGCGAATTGGGTTGAGAATCCGAC
GGGTGATGAGGATACTGTCAGCTCGATTTTCTATCTCGTGCTCGCCATTG
GCGCGCAGGTGTCCGATATCAATCAATCCCTGGCTGAGCAGTACTTCGTC
AGCGGCCGTCAGTTAGCGTTTTCTGCCTTCACGGAGACCCCGAGTATATA
TACCATTCAGTCGTATGTTTTGATCTCGATGTATATGTTGGGAGCCTGTC
GACGGAACGGAGCTTTTATGAATTTGGGAATCGCGCTCCGTGCCGCGTAT
GCGGTCGGAATTCACCGGAAAGATGCAAATGCGCTTTTCTGCACCCGAGA
ACGGCGGGCTCGAGAACGGGTATGGAAGAGTCTTCGTATGATGGATCTGT
ACCTTTGTGCCTCATTAGGACGTCCTCCTGCGACACTAGACTTTGACTAT
GATCTGCGTGAAGAGGGAATCTCACCAGGGGAGCAACAGCGCCTTCATCC
GGACGAGCAGTTGTCTATGACGGTGATCTCACTCTGCCGAATCTTCGAAC
GTATTCTGACCGAGGTCTACATGCGTCAAGTCGTCTCGATCAATGTTGCA
GAAACTATATCGAATCAGCATCGAGCTTGGGTGCGCAATCTCCCAGTATT
TCTGCAGATGCAGACTGAGCGGCTGGATTCCAAGACGCTGGAAGGCACCT
TATCTGCAGCACACATCTTTGGTTCCTACTACTGGTCGATTATTCTTCTT
ACTCGACCATTCCTCATCTTCCGAGTGTCCCAATATGTGCGGAATAGAAC
CGAGGCAACAGGGTCCTCCGACAGCAGGGCCAGCAACTCCCGCATTGCGT
TATTTGCCGACGCATGTGTTTATTCTGCCTTGCGCGGACTCAACATCGTG
GATGACCTTTCTCGCTACAACACCCTCCCGCGCAGACTCCCATTCCTTAT
CAATTCCGTCTTCAACTCGGCCGTGGTGCTTGGAGCCGCTTTCTTTGCCG
ACTACGACAACCTGCTCCCGCTTGAAGAAGGCATGGACAAGGCGGAGAAA
TTCCTAGGCCTCTTCGTACCCCACGACCCACACGCATGTCGCTTCTTCCA
GATCATCAAATACCTTCGAGGTGCAGTGGCGGAGTATGTCCGTCGACGGA
ATCGCCATTGGATGGAGCGTCGCAGCCGACAAGTCGACCAGCTCTTCGGC
CAAGTCGGGCCCACCAAAGAAAACCCCATGGCTGAAACAAACACCCCGAG
CAGTCATCGTGGAGAACCCACCGCTGTACCATCACCTTTATCCCCCGACA
AGCTCACCGGAGCATCTGCCTCTCAGCCGCCCGACCTAGCTACAAGCACC
ACTACCACCACTGGCCCAACCGACAGTGACATTTGGGATACACTCTATGG
CGCACAAGGCGCCAGCACACTACCATACGACACCGCAATCTCTACCCTCA
CCACAACCGGAATTCCAATCGGCTGTTCCCCCGGCGGGACCATCCCTGCC
GGTGGAATGCCCCCGGATGCTCCAGGGGCGCAAACCCCGCTCTCGGACGT
GATTCTCCCAGACAATGGCCTGCTCTATATGGCCGAAGACCTTCCTGTAT
TTGGGATTTGGGAAGATGCTTGAAAGGTATCTATCCTACTTTACATTACA
CTTGGAAATGGGTGCAAATATGCCCCTACTTGTCACATGATCCCCAACAC
CCTTCCTATGGGAAGCCGACCCAACCCGATCGCGGCGCGACTCCTCATGA
CTCTTGACCTCCCCCAGAACCTCAACCTTCTCTCCAATCAAATTAGCTGA
TATCAATTAACGTGTCTAACTTGGCGTGGCGTGGAATGGCGTTGGACTCG
TCAATCTCTGGGCTATGTATATACGAAGTAACTGAAACTTCCCCTTCAAT
AAATACCACTCACCACATCATGATACATATTTTATTCACAATGTACATAC
ATACATATACACGTCCATCCAATTG
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Coding sequence (CDS) from alignment at ch5:1321723..1324597-

>KJC3_007053-T1 ID=KJC3_007053-T1|Name=KJC3_007053-T1|organism=Aspergillus niger KJC3|type=CDS|length=2235bp|location=Sequence derived from alignment at ch5:1321723..1324597- (Aspergillus niger KJC3)
ATGCCTAAAGCTAATCCAGCCCCTGGGGGCCGACTCCGCTGCAGACGCGC
GTGCGATAGTTGCAAGCGGAGGAAACAAAAATGCAACGGAGAACAGCCAT
GTACTATCTGCATTCAACGGCGCAAAGAGTCCGAATGCCACTTCTCAGAC
AAACCGGCAAGATTGCTCAAACCGAATAACAGCAGCTCTAAGGACACCAT
GCTTCTCAGCGAACGCTTAGTCCCGACCCCACAGCGTCAGACCGCCATGG
ACCGACTCCTGAACTCGCTCGAAGACCGGAGCGCCAATCTGGAACAACAG
GCTACAGATGACAAAGAGGGAACAGCGCCAGTGCCCAAGGTTGCCAGGCT
ACTGCGTGATGGTCAAGGCAAATTCATGTACGTTGGCGACTCCGCCAGCT
TGTCTTTCCTACAGAGTGTGCGGAGGATCGTATCGACCTCTATCGGCAGA
TGCGAATTCACGGAGGACAACTCGCGACATTCGATGCTCGAGGCATTCCA
GAGTGGATCTACAACGCAGACAGGACCATTGATATCGCCACCAAGCAACG
AAGAGGCTCAGAGGCTGGCGCGCCAATTTGTGCTGGCCACAAGCCCGCTG
CTGGATCTGTTCGACCTCAACGAGTTTCACCCCCGGCTTGCGAATTGGGT
TGAGAATCCGACGGGTGATGAGGATACTGTCAGCTCGATTTTCTATCTCG
TGCTCGCCATTGGCGCGCAGGTGTCCGATATCAATCAATCCCTGGCTGAG
CAGTACTTCGTCAGCGGCCGTCAGTTAGCGTTTTCTGCCTTCACGGAGAC
CCCGAGTATATATACCATTCAGTCGTATGTTTTGATCTCGATGTATATGT
TGGGAGCCTGTCGACGGAACGGAGCTTTTATGAATTTGGGAATCGCGCTC
CGTGCCGCGTATGCGGTCGGAATTCACCGGAAAGATGCAAATGCGCTTTT
CTGCACCCGAGAACGGCGGGCTCGAGAACGGGTATGGAAGAGTCTTCGTA
TGATGGATCTGTACCTTTGTGCCTCATTAGGACGTCCTCCTGCGACACTA
GACTTTGACTATGATCTGCGTGAAGAGGGAATCTCACCAGGGGAGCAACA
GCGCCTTCATCCGGACGAGCAGTTGTCTATGACGGTGATCTCACTCTGCC
GAATCTTCGAACGTATTCTGACCGAGGTCTACATGCGTCAAGTCGTCTCG
ATCAATGTTGCAGAAACTATATCGAATCAGCATCGAGCTTGGGTGCGCAA
TCTCCCAGTATTTCTGCAGATGCAGACTGAGCGGCTGGATTCCAAGACGC
TGGAAGGCACCTTATCTGCAGCACACATCTTTGGTTCCTACTACTGGTCG
ATTATTCTTCTTACTCGACCATTCCTCATCTTCCGAGTGTCCCAATATGT
GCGGAATAGAACCGAGGCAACAGGGTCCTCCGACAGCAGGGCCAGCAACT
CCCGCATTGCGTTATTTGCCGACGCATGTGTTTATTCTGCCTTGCGCGGA
CTCAACATCGTGGATGACCTTTCTCGCTACAACACCCTCCCGCGCAGACT
CCCATTCCTTATCAATTCCGTCTTCAACTCGGCCGTGGTGCTTGGAGCCG
CTTTCTTTGCCGACTACGACAACCTGCTCCCGCTTGAAGAAGGCATGGAC
AAGGCGGAGAAATTCCTAGGCCTCTTCGTACCCCACGACCCACACGCATG
TCGCTTCTTCCAGATCATCAAATACCTTCGAGGTGCAGTGGCGGAGTATG
TCCGTCGACGGAATCGCCATTGGATGGAGCGTCGCAGCCGACAAGTCGAC
CAGCTCTTCGGCCAAGTCGGGCCCACCAAAGAAAACCCCATGGCTGAAAC
AAACACCCCGAGCAGTCATCGTGGAGAACCCACCGCTGTACCATCACCTT
TATCCCCCGACAAGCTCACCGGAGCATCTGCCTCTCAGCCGCCCGACCTA
GCTACAAGCACCACTACCACCACTGGCCCAACCGACAGTGACATTTGGGA
TACACTCTATGGCGCACAAGGCGCCAGCACACTACCATACGACACCGCAA
TCTCTACCCTCACCACAACCGGAATTCCAATCGGCTGTTCCCCCGGCGGG
ACCATCCCTGCCGGTGGAATGCCCCCGGATGCTCCAGGGGCGCAAACCCC
GCTCTCGGACGTGATTCTCCCAGACAATGGCCTGCTCTATATGGCCGAAG
ACCTTCCTGTATTTGGGATTTGGGAAGATGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007053KJC3_007053Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007053-T1.cdsKJC3_007053-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007053-T1.utr3p1KJC3_007053-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007053-T1.exon1KJC3_007053-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007053-T1.utr5p1KJC3_007053-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007053-T1KJC3_007053-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1321723..1324597 -
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